Clone IP09645 Report

Search the DGRC for IP09645

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:96
Well:45
Vector:pOT2
Associated Gene/TranscriptCG17855-RA
Protein status:IP09645.pep: gold
Preliminary Size:879
Sequenced Size:1652

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17855 2005-01-01 Successful iPCR screen
CG17855 2008-04-29 Release 5.5 accounting
CG17855 2008-08-15 Release 5.9 accounting
CG17855 2008-12-18 5.12 accounting

Clone Sequence Records

IP09645.complete Sequence

1652 bp (1652 high quality bases) assembled on 2006-03-22

GenBank Submission: BT024996

> IP09645.complete
ACAAATCGAACAAATGGAGAAACGTGCTACATCTACCATGCAGGTTCTCT
ATGCAGAACTGGCTGCCGCAAAGTCCAGAAGTGCGGAGCTGGAGGAGGAA
AACATTTTGCTGCGCCATCGACTAAATCGCGCATCTGCCAGCCACAGCAC
CAATGCGGCCATAAATGTGGAGGCCAAGATCATGGTCTTCCAATTGGAGG
AGGAACGAGATCGTCTGGTGGAAACACTGCAGAAGCACAAGAAGAAGTAC
AACAAACTGCATGACGCTTATCTGGAGAAAGTGAAACGTTGTCGTGCTTT
GGAGGAGATGTTTAAACGGCAGAAGACGCTTACAGGCTTGGTAATGAAGT
CCTCTTTAGATCAAAGAAATGCAGAGCAACGAATGGCTATGGAGAAAAGG
CAGTCGGCCCAAAGCGATGTCAACGAATTGAACGAGCTGAAGGCCAAAGT
AGAAAAACTTCAAAGAGCCCTTGATGAGTCATACGACATTATTGACGAAA
TGGATTTTGAACTTGAGAGCGTGGAATTACTGGAAATGCAAAACCAATCC
TTGCGGGACGAATTAGCCGCTTTTAAGGCAAAATCAGAAGAAGGAGCGAC
CAGTCTGCCGGCCTCGCTACCCAACGATGACGACCCACCGCCCAAATATG
AGGAAGACTATCCCGGACAGCATCATAAAGCTATGCAGGCCCGGCGCTGC
TCCTCTAGCAGTGAATCTGACCCCAAGGATGATGATGCCGACGCAGAAAC
TATGGAAAGAGCTGCTTTAACCCATAGCCTCATACAAACTGTGGAAACAG
AGAGCAATGCCCTAAGACGGGAATTGTTGAGATCCCGCTGTCAAAGAACA
ATTCGCGCCAAGTTGGAGAAAGAAAGCGAGCCTGTTGATTAGGATAAGTG
GCGGGATTAATCTTATCACATAGCTCCCAGCCAAAAACTAAACAACCAAC
CAATAGATCATAATAACAAGTAGCCATACTAAAGCTGATGAAACTGATCA
CTAAGTTTACGCACAGAGAGCAATAACTAGACGGCTGGACTAACCCAGAT
TCCGAACCAACTACGCCTAACCAGTGCACATACCAGAATTTGCTTTTAAG
GTTCGACAAACACGCTCGGCGGCTGCGTTAAATCAAAACTTTTGCGATAT
AGTAACCCGGTTTCTTGGACTGCGCGCAGAGAAACCCCTCGTCTAATGGC
GATTAATTAAATTATTTGCTAATGCCATCAAACGAGTTGCGGACAGATCA
CCTGCCAAAAGGATCTGGCCTCCGAGCTGTGAAGGTTCCAGCCCCCGACT
TCTGCCCTCCCATCCCATTTCCAATTCGACGTGGTGCGCTATCCATTAAA
ACATGACAATTATTTTTATGACTTAATGCAGTCGGAGGCCTTGTTGCCCA
ATGCCTAATGTTGCAAATTATTGACAAAGTAAATTAATCTCCACATTTGT
TGGTTGGACCAGACAAACTAGCGCGACACCTCTAAGATCACCATCAAGCT
CTCCCACTTGCGGCATATTCATTTGGATGCTTATCGAATGTGCGTCGCAA
AAGAAAAATCAAATGCGTCATGGGTAAAAAAACTACAAGATTTTATAAAT
TTAAGTTTTAATAAAAATATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAA
AA

IP09645.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:39:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG17855-RA 1735 CG17855-RA 111..1735 1..1625 8125 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9540472..9541318 779..1625 4220 99.9 Plus
chr2L 23010047 chr2L 9539586..9539896 64..374 1540 99.7 Plus
chr2L 23010047 chr2L 9540156..9540413 521..778 1290 100 Plus
chr2L 23010047 chr2L 9539954..9540103 373..522 750 100 Plus
chr2L 23010047 chr2L 9539469..9539536 1..68 340 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9541634..9542483 779..1628 4250 100 Plus
2L 23513712 2L 9540748..9541058 64..374 1540 99.7 Plus
2L 23513712 2L 9541318..9541575 521..778 1290 100 Plus
2L 23513712 2L 9541116..9541265 373..522 750 100 Plus
2L 23513712 2L 9540631..9540698 1..68 340 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9541634..9542483 779..1628 4250 100 Plus
2L 23513712 2L 9540748..9541058 64..374 1540 99.6 Plus
2L 23513712 2L 9541318..9541575 521..778 1290 100 Plus
2L 23513712 2L 9541116..9541265 373..522 750 100 Plus
2L 23513712 2L 9540631..9540698 1..68 340 100 Plus
Blast to na_te.dros performed on 2019-03-16 09:29:50 has no hits.

IP09645.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:30:41 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9540156..9540413 521..778 100 -> Plus
chr2L 9539469..9539536 1..68 100 -> Plus
chr2L 9539591..9539896 69..374 100 -> Plus
chr2L 9539956..9540101 375..520 100 -> Plus
chr2L 9540472..9541281 779..1588 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:41:18 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:05:37 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:50:05 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:50:43 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:11:31 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:53:50 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:05:37 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..1625 1..1625 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:50:05 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 109..1733 1..1625 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:50:43 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 1..879 14..892 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:11:31 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
CG17855-RA 109..1733 1..1625 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:41 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9540631..9540698 1..68 100 -> Plus
2L 9541118..9541263 375..520 100 -> Plus
2L 9540753..9541058 69..374 100 -> Plus
2L 9541318..9541575 521..778 100 -> Plus
2L 9541634..9542480 779..1625 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:41 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9540631..9540698 1..68 100 -> Plus
2L 9541118..9541263 375..520 100 -> Plus
2L 9540753..9541058 69..374 100 -> Plus
2L 9541318..9541575 521..778 100 -> Plus
2L 9541634..9542480 779..1625 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:41 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9540631..9540698 1..68 100 -> Plus
2L 9541118..9541263 375..520 100 -> Plus
2L 9540753..9541058 69..374 100 -> Plus
2L 9541318..9541575 521..778 100 -> Plus
2L 9541634..9542480 779..1625 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:50:05 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9540631..9540698 1..68 100 -> Plus
arm_2L 9540753..9541058 69..374 100 -> Plus
arm_2L 9541118..9541263 375..520 100 -> Plus
arm_2L 9541318..9541575 521..778 100 -> Plus
arm_2L 9541634..9542480 779..1625 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:25:27 Download gff for IP09645.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9541118..9541263 375..520 100 -> Plus
2L 9540753..9541058 69..374 100 -> Plus
2L 9541318..9541575 521..778 100 -> Plus
2L 9541634..9542480 779..1625 100   Plus
2L 9540631..9540698 1..68 100 -> Plus

IP09645.hyp Sequence

Translation from 0 to 891

> IP09645.hyp
QIEQMEKRATSTMQVLYAELAAAKSRSAELEEENILLRHRLNRASASHST
NAAINVEAKIMVFQLEEERDRLVETLQKHKKKYNKLHDAYLEKVKRCRAL
EEMFKRQKTLTGLVMKSSLDQRNAEQRMAMEKRQSAQSDVNELNELKAKV
EKLQRALDESYDIIDEMDFELESVELLEMQNQSLRDELAAFKAKSEEGAT
SLPASLPNDDDPPPKYEEDYPGQHHKAMQARRCSSSSESDPKDDDADAET
MERAALTHSLIQTVETESNALRRELLRSRCQRTIRAKLEKESEPVD*

IP09645.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:06:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG17855-PA 292 CG17855-PA 1..292 5..296 1452 100 Plus

IP09645.pep Sequence

Translation from 13 to 891

> IP09645.pep
MEKRATSTMQVLYAELAAAKSRSAELEEENILLRHRLNRASASHSTNAAI
NVEAKIMVFQLEEERDRLVETLQKHKKKYNKLHDAYLEKVKRCRALEEMF
KRQKTLTGLVMKSSLDQRNAEQRMAMEKRQSAQSDVNELNELKAKVEKLQ
RALDESYDIIDEMDFELESVELLEMQNQSLRDELAAFKAKSEEGATSLPA
SLPNDDDPPPKYEEDYPGQHHKAMQARRCSSSSESDPKDDDADAETMERA
ALTHSLIQTVETESNALRRELLRSRCQRTIRAKLEKESEPVD*

IP09645.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22761-PA 284 GF22761-PA 1..284 1..292 1088 77.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25357-PA 292 GG25357-PA 1..289 1..289 1380 92 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10430-PA 296 GH10430-PA 1..283 1..286 842 64 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG17855-PA 292 CG17855-PA 1..292 1..292 1452 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24271-PA 292 GI24271-PA 1..292 1..292 809 65.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18913-PA 297 GL18913-PA 1..290 1..287 1021 70.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14701-PA 297 GA14701-PA 1..290 1..287 1019 70 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17508-PA 263 GM17508-PA 1..256 1..256 1306 97.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23611-PA 292 GD23611-PA 1..292 1..292 1484 97.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21529-PA 300 GJ21529-PA 1..300 1..292 890 65 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24774-PA 301 GK24774-PA 1..296 1..289 973 66.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18850-PA 292 GE18850-PA 1..292 1..292 1450 95.2 Plus