Clone IP09652 Report

Search the DGRC for IP09652

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:96
Well:52
Vector:pOT2
Associated Gene/TranscriptDic4-RA
Protein status:IP09652.pep: gold
Preliminary Size:909
Sequenced Size:1161

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18363 2008-04-29 Release 5.5 accounting
CG18363 2008-08-15 Release 5.9 accounting
CG18363 2008-12-18 5.12 accounting

Clone Sequence Records

IP09652.complete Sequence

1161 bp (1161 high quality bases) assembled on 2006-01-24

GenBank Submission: BT024341

> IP09652.complete
AAAATTGTCAGTGAAAGCAAAAAAGAAACACATAAGCCTTTCCCTCCCAA
TCAAAAGCCAATTTCTTTAAATTAGGGCCAATCTAGAATCGTCCAGAATC
CGAATGCACGGTGAAAGGAAGTGCGTCGACCATCTGGAGGAATGCCGGTT
TTTGATGACCACTTCCTTGGCGACTGCCATGATGAGCCCGAAGGACTTTT
GCCGCGTTGGTGGTTCGGTGGCTTTGCCTCGATGTGCGTTGCCTTCGCAG
TGGCGCCCATTGATATCGTGAAAACTCACATGCAGATCCAAAGGCAAAAG
CGTTCAATTTTAGGCACGGTCAAAAGAATACACTCTTTAAAAGGATACTT
GGGCTTCTACGATGGCTTCTCGGCTGCCATCCTGAGACAAATGACCAGCA
CCAATATCCATTTCATAGTGTATGATACTGGCAAGAAAATGGAGTACGTC
GATAGGGATTCATATCTGGGAAAGATTATTTTGGGCTGCGTGGCTGGAGC
TTGCGGTTCTGCGTTTGGTATACCAACGGATCTGATTAACGTGCGGATGC
AAACCGATATGAAGGAGCCGCCGTACAAGCGACGCAACTATAAGCATGTC
TTCGATGGACTCATTCGAATTCCCAAGGAGGAGGGCTGGAAGGCACTTTA
CAAAGGTGGATCGGTAGCGGTCTTCAAATCATCGCTAAGCACTTGCAGCC
AGATAGCTTTCTACGATATTATTAAAACGGAAGTGAGGAAAAATATCTCT
GTGAATGACGGATTGCCCTTGCACTTTCTCACTTCGCTGGGTACATCGAT
CATTTCGTCTGCGATCACTCATCCCCTGGACGTGGTAAGGACCATTATGA
TGAACTCCAGACCCGGCGAATTTCGCACAGTCTTCCAAGCGTCTGTTCAC
ATGATGCGCTTTGGCGTAATGGGACCCTATCGAGGATTTGTGCCAACTAT
AGTGCGAAAAGCACCGGCCACCACTTTGCTATTTGTTTTGTACGAGCAAC
TGAGGCTCCATTTCGGAATTTGCTCCCTGGGAGGGGAGAAGTACAATTAA
GACGATCGTGCTGCGCATTCGGAATTTGACAAAAATACCATGTGAACTTT
TACCAACGTTTTTTTACGATAAAGATTTCCATGTTAATTCAAAGAAAAAA
AAAAAAAAAAA

IP09652.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18363-RA 1179 CG18363-RA 34..1179 1..1146 5730 100 Plus
CG18363.a 1924 CG18363.a 34..1179 1..1146 5730 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18686765..18687188 1144..721 2075 99.3 Minus
chr3L 24539361 chr3L 18687765..18688108 344..1 1720 100 Minus
chr3L 24539361 chr3L 18687456..18687705 591..342 1205 98.8 Minus
chr3L 24539361 chr3L 18687263..18687395 720..588 665 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:58:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18697067..18697492 1146..721 2130 100 Minus
3L 28110227 3L 18698069..18698412 344..1 1720 100 Minus
3L 28110227 3L 18697760..18698009 591..342 1235 99.6 Minus
3L 28110227 3L 18697567..18697699 720..588 665 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18690167..18690592 1146..721 2130 100 Minus
3L 28103327 3L 18691169..18691512 344..1 1720 100 Minus
3L 28103327 3L 18690860..18691109 591..342 1235 99.6 Minus
3L 28103327 3L 18690667..18690799 720..588 665 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:15:51 has no hits.

IP09652.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:16:33 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18686765..18687188 721..1144 99 <- Minus
chr3L 18687263..18687395 588..720 100 <- Minus
chr3L 18687460..18687703 344..587 99 <- Minus
chr3L 18687766..18688108 1..343 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:41:20 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..909 142..1050 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:35:44 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..909 142..1050 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:59:00 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 1..909 142..1050 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:10:25 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..909 142..1050 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:03:03 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 1..909 142..1050 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:07:13 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..1144 1..1144 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:35:44 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..1144 1..1144 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:59:00 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 1..1144 1..1144 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:10:26 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
CG18363-RA 1..1144 1..1144 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:03:03 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
Dic4-RA 1..1144 1..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:33 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18697069..18697492 721..1144 100 <- Minus
3L 18697567..18697699 588..720 100 <- Minus
3L 18697764..18698007 344..587 100 <- Minus
3L 18698070..18698412 1..343 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:33 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18697069..18697492 721..1144 100 <- Minus
3L 18697567..18697699 588..720 100 <- Minus
3L 18697764..18698007 344..587 100 <- Minus
3L 18698070..18698412 1..343 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:16:33 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18697069..18697492 721..1144 100 <- Minus
3L 18697567..18697699 588..720 100 <- Minus
3L 18697764..18698007 344..587 100 <- Minus
3L 18698070..18698412 1..343 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:59:00 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18690864..18691107 344..587 100 <- Minus
arm_3L 18690169..18690592 721..1144 100 <- Minus
arm_3L 18690667..18690799 588..720 100 <- Minus
arm_3L 18691170..18691512 1..343 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:59:27 Download gff for IP09652.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18690169..18690592 721..1144 100 <- Minus
3L 18690667..18690799 588..720 100 <- Minus
3L 18690864..18691107 344..587 100 <- Minus
3L 18691170..18691512 1..343 100   Minus

IP09652.pep Sequence

Translation from 141 to 1049

> IP09652.pep
MPVFDDHFLGDCHDEPEGLLPRWWFGGFASMCVAFAVAPIDIVKTHMQIQ
RQKRSILGTVKRIHSLKGYLGFYDGFSAAILRQMTSTNIHFIVYDTGKKM
EYVDRDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKEPPYKRRNY
KHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRK
NISVNDGLPLHFLTSLGTSIISSAITHPLDVVRTIMMNSRPGEFRTVFQA
SVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHFGICSLGGEK
YN*

IP09652.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10808-PA 301 GF10808-PA 14..300 11..297 1024 63.4 Plus
Dana\GF11222-PA 288 GF11222-PA 11..283 20..292 591 41.5 Plus
Dana\GF17595-PA 263 GF17595-PA 9..261 22..295 541 39.1 Plus
Dana\GF17597-PA 308 GF17597-PA 9..277 21..292 530 39.3 Plus
Dana\GF23207-PA 310 GF23207-PA 16..285 20..292 507 39.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15727-PA 300 GG15727-PA 1..300 1..300 1480 92 Plus
Dere\GG19610-PA 280 GG19610-PA 8..280 21..295 602 41.5 Plus
Dere\GG10687-PA 288 GG10687-PA 9..281 20..292 569 44 Plus
Dere\GG15457-PA 304 GG15457-PA 16..285 20..292 531 40.3 Plus
Dere\GG13673-PA 328 GG13673-PA 53..328 21..300 473 34.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19040-PA 288 GH19040-PA 9..276 23..292 609 41.5 Plus
Dgri\GH15856-PA 287 GH15856-PA 3..279 14..292 580 39.8 Plus
Dgri\GH18903-PA 316 GH18903-PA 18..311 22..300 364 30.8 Plus
Dgri\GH15793-PA 310 GH15793-PA 16..292 22..287 360 32.4 Plus
Dgri\GH11017-PA 333 GH11017-PA 45..329 26..292 265 25.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-PC 302 CG18363-PC 1..302 1..302 1596 100 Plus
Dic4-PA 302 CG18363-PA 1..302 1..302 1596 100 Plus
Dic4-PB 173 CG18363-PB 1..147 1..147 793 100 Plus
Dic3-PA 287 CG11196-PA 9..281 20..292 588 42.9 Plus
Dic1-PC 280 CG8790-PC 10..277 23..292 576 41.9 Plus
Dic1-PA 280 CG8790-PA 10..277 23..292 576 41.9 Plus
Dic1-PB 280 CG8790-PB 10..277 23..292 576 41.9 Plus
Dic2-PC 304 CG4323-PC 16..285 20..292 557 41 Plus
Dic2-PA 304 CG4323-PA 16..285 20..292 557 41 Plus
CG6893-PB 250 CG6893-PB 1..242 47..292 391 34.8 Plus
CG1907-PA 317 CG1907-PA 20..313 22..300 368 30.6 Plus
CG18418-PA 311 CG18418-PA 21..293 26..287 336 29.1 Plus
CG7514-PA 301 CG7514-PA 19..296 26..299 323 28.5 Plus
Bmcp-PB 303 CG7314-PB 12..301 25..288 273 28.9 Plus
Bmcp-PA 303 CG7314-PA 12..301 25..288 273 28.9 Plus
Dic3-PB 170 CG11196-PB 9..136 20..147 264 40.8 Plus
Ucp4C-PA 335 CG9064-PA 54..327 37..288 263 27.3 Plus
Ucp4B-PA 337 CG18340-PA 44..329 28..288 263 29 Plus
Ucp4A-PB 340 CG6492-PB 50..336 29..292 223 25.7 Plus
Ucp4A-PA 340 CG6492-PA 50..336 29..292 223 25.7 Plus
mfrn-PA 379 CG4963-PA 21..290 26..301 210 26.1 Plus
CG18327-PB 304 CG18327-PB 9..293 26..287 200 24.8 Plus
CG18327-PA 304 CG18327-PA 9..293 26..287 200 24.8 Plus
MME1-PA 299 CG3476-PA 21..287 26..281 197 24.5 Plus
CG18324-PB 307 CG18324-PB 9..293 26..287 195 23.5 Plus
CG8323-PA 303 CG8323-PA 9..293 26..287 179 24.5 Plus
Tpc2-PB 323 CG2857-PB 16..306 26..291 178 20.4 Plus
sea-PE 317 CG6782-PE 44..306 27..285 172 23 Plus
sea-PD 317 CG6782-PD 44..306 27..285 172 23 Plus
sea-PC 317 CG6782-PC 44..306 27..285 172 23 Plus
sea-PA 317 CG6782-PA 44..306 27..285 172 23 Plus
Ucp4B-PC 228 CG18340-PC 44..224 28..190 171 33 Plus
Tpc1-PA 332 CG6608-PA 35..328 26..288 168 22.1 Plus
Tpc1-PB 332 CG6608-PB 35..328 26..288 168 22.1 Plus
Ucp4B-PB 222 CG18340-PB 44..221 28..187 166 33 Plus
CG5646-PA 303 CG5646-PA 12..289 26..285 162 25.4 Plus
Ant2-PC 307 CG1683-PC 16..307 17..291 162 22.4 Plus
Ant2-PB 307 CG1683-PB 16..307 17..291 162 22.4 Plus
Ant2-PA 307 CG1683-PA 16..307 17..291 162 22.4 Plus
aralar1-PB 679 CG2139-PB 418..601 15..195 160 28.4 Plus
aralar1-PD 682 CG2139-PD 421..604 15..195 160 28.4 Plus
aralar1-PA 682 CG2139-PA 421..604 15..195 160 28.4 Plus
aralar1-PF 694 CG2139-PF 421..604 15..195 160 28.4 Plus
aralar1-PC 695 CG2139-PC 434..617 15..195 160 28.4 Plus
aralar1-PE 707 CG2139-PE 446..629 15..195 160 28.4 Plus
CG16736-PA 277 CG16736-PA 19..271 39..287 159 24.8 Plus
sesB-PE 299 CG16944-PE 17..296 26..288 151 22.5 Plus
sesB-PB 299 CG16944-PB 17..296 26..288 151 22.5 Plus
sesB-PA 299 CG16944-PA 17..296 26..288 151 22.5 Plus
sesB-PD 312 CG16944-PD 30..309 26..288 151 22.5 Plus
sesB-PC 312 CG16944-PC 30..309 26..288 151 22.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11313-PA 254 GI11313-PA 1..254 47..299 639 51.2 Plus
Dmoj\GI24334-PA 280 GI24334-PA 9..276 23..292 610 42.6 Plus
Dmoj\GI12639-PA 273 GI12639-PA 8..259 39..292 546 42.5 Plus
Dmoj\GI10541-PA 289 GI10541-PA 5..281 17..292 492 39.8 Plus
Dmoj\GI23120-PA 315 GI23120-PA 13..310 16..300 387 32.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:17:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22710-PA 295 GL22710-PA 11..287 14..292 795 53.4 Plus
Dper\GL24469-PA 282 GL24469-PA 9..277 22..292 600 42.4 Plus
Dper\GL10604-PA 290 GL10604-PA 9..281 20..292 588 42.2 Plus
Dper\GL24092-PA 299 GL24092-PA 18..285 22..292 543 41.5 Plus
Dper\GL22891-PA 314 GL22891-PA 31..305 17..292 536 37.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:17:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23392-PA 295 GA23392-PA 11..287 14..292 793 53 Plus
Dpse\GA21325-PA 282 GA21325-PA 9..277 22..292 600 42.4 Plus
Dpse\GA10831-PA 290 GA10831-PA 9..289 20..300 586 41.3 Plus
Dpse\GA18108-PA 299 GA18108-PA 18..285 22..292 548 41.8 Plus
Dpse\GA19935-PA 321 GA19935-PA 36..312 15..292 532 37.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14924-PA 302 GM14924-PA 1..302 1..302 1549 94.4 Plus
Dsec\GM24103-PA 280 GM24103-PA 2..280 12..295 600 40.1 Plus
Dsec\GM20734-PA 287 GM20734-PA 9..281 20..292 580 42.8 Plus
Dsec\GM23191-PA 304 GM23191-PA 16..285 20..292 561 39.9 Plus
Dsec\GM14988-PA 268 GM14988-PA 11..252 21..266 393 34.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12330-PA 302 GD12330-PA 1..302 1..302 1549 94.4 Plus
Dsim\GD10201-PA 287 GD10201-PA 9..281 20..292 597 43.2 Plus
Dsim\GD18902-PA 280 GD18902-PA 2..280 12..295 596 40.1 Plus
Dsim\GD20064-PA 304 GD20064-PA 16..285 20..292 558 39.9 Plus
Dsim\GD14765-PA 260 GD14765-PA 3..244 21..266 394 34.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11569-PA 302 GJ11569-PA 12..302 9..299 805 51.7 Plus
Dvir\GJ12758-PA 286 GJ12758-PA 10..279 21..292 590 41.9 Plus
Dvir\GJ10419-PA 288 GJ10419-PA 9..277 22..292 579 40.2 Plus
Dvir\GJ13745-PA 296 GJ13745-PA 16..288 19..292 546 39.3 Plus
Dvir\GJ24196-PA 283 GJ24196-PA 8..277 20..292 483 38.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21563-PA 291 GK21563-PA 2..278 14..292 618 44.1 Plus
Dwil\GK13938-PA 282 GK13938-PA 9..277 22..292 579 40.6 Plus
Dwil\GK22729-PA 314 GK22729-PA 15..283 22..292 547 40.6 Plus
Dwil\GK11904-PA 326 GK11904-PA 18..318 10..297 395 30.4 Plus
Dwil\GK10769-PA 165 GK10769-PA 1..158 136..292 317 38.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:17:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22058-PA 300 GE22058-PA 1..300 1..300 1450 89.3 Plus
Dyak\GE26266-PA 280 GE26266-PA 9..280 22..295 610 42.3 Plus
Dyak\GE23410-PA 287 GE23410-PA 9..281 20..292 573 43.9 Plus
Dyak\GE25074-PA 304 GE25074-PA 16..285 20..292 567 40.3 Plus
Dyak\GE11146-PA 304 GE11146-PA 16..285 20..292 567 40.3 Plus

IP09652.hyp Sequence

Translation from 141 to 1049

> IP09652.hyp
MPVFDDHFLGDCHDEPEGLLPRWWFGGFASMCVAFAVAPIDIVKTHMQIQ
RQKRSILGTVKRIHSLKGYLGFYDGFSAAILRQMTSTNIHFIVYDTGKKM
EYVDRDSYLGKIILGCVAGACGSAFGIPTDLINVRMQTDMKEPPYKRRNY
KHVFDGLIRIPKEEGWKALYKGGSVAVFKSSLSTCSQIAFYDIIKTEVRK
NISVNDGLPLHFLTSLGTSIISSAITHPLDVVRTIMMNSRPGEFRTVFQA
SVHMMRFGVMGPYRGFVPTIVRKAPATTLLFVLYEQLRLHFGICSLGGEK
YN*

IP09652.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:06:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dic4-PC 302 CG18363-PC 1..302 1..302 1596 100 Plus
Dic4-PA 302 CG18363-PA 1..302 1..302 1596 100 Plus
Dic4-PB 173 CG18363-PB 1..147 1..147 793 100 Plus
Dic3-PA 287 CG11196-PA 9..281 20..292 588 42.9 Plus
Dic1-PC 280 CG8790-PC 10..277 23..292 576 41.9 Plus