Clone IP09724 Report

Search the DGRC for IP09724

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:97
Well:24
Vector:pOT2
Associated Gene/TranscriptCG15877-RA
Protein status:IP09724.pep: gold
Preliminary Size:834
Sequenced Size:1026

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15877 2008-04-29 Release 5.5 accounting
CG15877 2008-08-15 Release 5.9 accounting
CG15877 2008-12-18 5.12 accounting

Clone Sequence Records

IP09724.complete Sequence

1026 bp (1026 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023558

> IP09724.complete
CTTGGCAACGCCAGACAGAAACACATTTTGTTTGTAACTAAAGAAGTTTT
TTAAATTTTCTTTTGAATAACCTTGGTGTACAAAGTTAATTTTTAAACGA
CACGCTTCTAAAATGGCCCGCACTGAACTGGAGAAAAAGGTCAAGCGCCA
GGGCAAAAAACGCAAGCACGAGGTGACTAAGAACCCTGAGCATGCGGCCA
GCGACGACGAGGTGGCCAACAAAAGTCTAATTCTAGCTCCACAGGTAGAT
CAACAGGAGGTTCCAACAGATAAACCCGCCAAGAGGCGGCATAAAGAATC
AGAAGTATCGGCCACTAAGAAACAAAGCAGGAAAAACCAAGCGGAGGAGC
AGGTGGCCACCAGTGGAAGCGATGAAAGTCTTCCTCAGAAGCCTCAGAAG
AGAAAACAAGTCCAGGATGCCAACGAAACCAAAAAGCTGAAACGCAGCAA
AACGCAGGAAAATAACTCGGATGAAGACGACGATGTGGACTCCCAGCCCA
CAGCAGCGCAACTAAAAGAAGCAGCTCGTCCGGAGAACGCTTATGCAGTG
GTTACAGTGCGCCAAAAGAAGAAACAGAAGCACCAGCAGCGCCTCGAGGC
CCAAAAGAGTCAGAGCTCCAACAAAGATGCCAAAGTCAACAAGGAATATC
TTCTAAAATGGAAGGAATCCCGCCAGGATTGGAAGTTCAACAAACTGCGA
CAGATTTCCATACAACAAACCGCCTTTGATGTGGAGAAACTGGATGACGA
GCTGTGGCCAACTGCTCTGGAGTATTTGGCCAGTTCCCAGGGAGCAGCGC
GCTCAAAGATCAGTCAGTTGGCCGAGGAGGTGATCCAGAAACTGGACAAG
GAGGGCGAAAAGCTGGAGGACGAGGCGGAAAGGCGAAAGCTAATCGAGTC
CACGCAGTACCGGCGGGCACGCGATCTCCTCCAAAGCTTCGACTAGTTTA
TTATGTTAGTTGTTAATTTTTGCCTTAGGAATAAATTACACATGCCTTCC
TATTTTAAAAAAAAAAAAAAAAAAAA

IP09724.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-RA 1023 CG15877-RA 18..1023 1..1006 5030 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:45:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2375920..2376660 1006..266 3495 98.1 Minus
chr3L 24539361 chr3L 2376712..2376979 269..1 1175 96.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2376477..2377224 1013..266 3725 99.9 Minus
3L 28110227 3L 2377276..2377544 269..1 1345 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 2376477..2377224 1013..266 3725 99.8 Minus
3L 28103327 3L 2377276..2377544 269..1 1345 100 Minus
Blast to na_te.dros performed on 2019-03-16 15:45:58 has no hits.

IP09724.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:46:55 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2375920..2376656 270..1006 98 <- Minus
chr3L 2376712..2376979 1..269 96   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:42:09 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 1..834 113..946 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:00:29 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 1..834 113..946 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:53:28 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 1..834 113..946 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:00 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 1..834 113..946 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:53:22 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 1..834 113..946 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:43:10 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 13..1018 1..1006 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:00:29 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 13..1018 1..1006 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:53:28 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 13..1018 1..1006 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:00 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 13..1018 1..1006 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:53:22 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15877-RA 13..1018 1..1006 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:46:55 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2376484..2377220 270..1006 100 <- Minus
3L 2377276..2377544 1..269 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:46:55 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2376484..2377220 270..1006 100 <- Minus
3L 2377276..2377544 1..269 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:46:55 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2376484..2377220 270..1006 100 <- Minus
3L 2377276..2377544 1..269 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:53:28 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2376484..2377220 270..1006 100 <- Minus
arm_3L 2377276..2377544 1..269 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:19:58 Download gff for IP09724.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2376484..2377220 270..1006 100 <- Minus
3L 2377276..2377544 1..269 100   Minus

IP09724.pep Sequence

Translation from 112 to 945

> IP09724.pep
MARTELEKKVKRQGKKRKHEVTKNPEHAASDDEVANKSLILAPQVDQQEV
PTDKPAKRRHKESEVSATKKQSRKNQAEEQVATSGSDESLPQKPQKRKQV
QDANETKKLKRSKTQENNSDEDDDVDSQPTAAQLKEAARPENAYAVVTVR
QKKKQKHQQRLEAQKSQSSNKDAKVNKEYLLKWKESRQDWKFNKLRQISI
QQTAFDVEKLDDELWPTALEYLASSQGAARSKISQLAEEVIQKLDKEGEK
LEDEAERRKLIESTQYRRARDLLQSFD*

IP09724.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24867-PA 268 GF24867-PA 1..268 1..277 765 65 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14519-PA 278 GG14519-PA 1..278 1..277 1093 85.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15004-PA 242 GH15004-PA 1..242 1..277 566 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-PA 277 CG15877-PA 1..277 1..277 1389 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13166-PA 243 GI13166-PA 1..243 1..277 572 50.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24614-PA 272 GL24614-PA 1..272 1..277 648 61.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23363-PA 219 GA23363-PA 1..219 1..277 371 46.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14123-PA 277 GM14123-PA 1..277 1..277 1220 90.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:55:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13393-PA 277 GD13393-PA 1..277 1..277 1242 91.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:55:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11941-PA 150 GJ11941-PA 2..150 129..277 529 67.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:55:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12513-PA 326 GK12513-PA 1..326 1..277 588 47.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:55:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21709-PA 278 GE21709-PA 1..278 1..277 1116 87.4 Plus

IP09724.hyp Sequence

Translation from 112 to 945

> IP09724.hyp
MARTELEKKVKRQGKKRKHEVTKNPEHAASDDEVANKSLILAPQVDQQEV
PTDKPAKRRHKESEVSATKKQSRKNQAEEQVATSGSDESLPQKPQKRKQV
QDANETKKLKRSKTQENNSDEDDDVDSQPTAAQLKEAARPENAYAVVTVR
QKKKQKHQQRLEAQKSQSSNKDAKVNKEYLLKWKESRQDWKFNKLRQISI
QQTAFDVEKLDDELWPTALEYLASSQGAARSKISQLAEEVIQKLDKEGEK
LEDEAERRKLIESTQYRRARDLLQSFD*

IP09724.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15877-PA 277 CG15877-PA 1..277 1..277 1389 100 Plus