Clone IP09733 Report

Search the DGRC for IP09733

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:97
Well:33
Vector:pOT2
Associated Gene/TranscriptPhae2-RB
Protein status:IP09733.pep: gold
Preliminary Size:822
Sequenced Size:881

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16997 2005-01-01 Successful iPCR screen
CG16997 2008-04-29 Release 5.5 accounting
CG16997 2008-08-15 Release 5.9 accounting
CG16997 2008-12-18 5.12 accounting

Clone Sequence Records

IP09733.complete Sequence

881 bp (881 high quality bases) assembled on 2005-03-06

GenBank Submission: BT023202

> IP09733.complete
ATGGACAACAAACCATGTGGCGCCATCGCCACCTGGCCACTATCCTCCTG
CTGGCGGTGTGCGTTTCCCAAGGATCTGGATTAGCCTTGGACCAACCCGA
AGGACGCGTTGTGGGTGGAAAAGCGGCGGCGGCCAATAGTGCTCCGTATA
TAGTGTCCATGCAGTACGGAGGAACTCACTATTGCGCCGCTAACATCATT
AATTCCAACTGGCTGGTAACGGCTGCTCACTGCCTGGCCAATAGGAATCA
AGTACTTGGAAGCACCCTGGTGGCTGGAAGCATTGCGGTGGCCGGAACAG
CGAGCACAACACAGAAGAGGCAAATCACCCACTATGTGATCAATGATCTT
TATACCGGCGGAACTGTGCCCTATGACATCGGATTGATTTACACGCCCAC
CGCCTTCACTTGGACCGCTGCAGTGGCTCCGGTGAAGCTGCCATCGTCCG
GCGTGAGGCCAACTGGAAAGGCTGACCTCTTTGGCTGGGGCAGTACTAGC
AAAACGAATAGCCCCTCATATCCGAAAACCCTCCAGGAGGCGAAGAACAT
ACCCATCATAAGCCTCGACTCCTGCGCTGCGGCACTTGGCTCTAAGGGTC
AGGATGTGCACACCACGAACCTGTGCACAGGTCCTCTCACCGGCGGCACC
AGCTTTTGCACCTCGGACTCCGGTGGTCCGCTGGTCCAGGGAAACGTTCT
AATCGGCATCGTGTCTTGGGGAAAACTTCCATGTGGTCAGCCCAACTCTC
CGTCGGTGTATGTCCAGGTCTCCTCGTTCATAACATGGATAGCAGCCAAC
CAAAAGAAATGAATTCTGGAGTATAAGATAGTATCTGAATAAAGAAATAC
TTATGAGATTGCAAAAAAAAAAAAAAAAAAA

IP09733.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:47:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG16997-RA 872 CG16997-RA 11..872 1..862 4310 100 Plus
CG16996-RA 1066 CG16996-RA 279..650 95..466 705 79.3 Plus
CG16996-RA 1066 CG16996-RA 787..986 603..802 400 80 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:20:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12109795..12110656 1..862 4310 100 Plus
chr2L 23010047 chr2L 12108396..12109103 95..802 1065 76.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12111134..12111996 1..863 4315 100 Plus
2L 23513712 2L 12109735..12110442 95..802 1065 76.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12111134..12111996 1..863 4315 100 Plus
2L 23513712 2L 12109735..12110106 95..466 705 79.3 Plus
2L 23513712 2L 12110243..12110442 603..802 400 80 Plus
Blast to na_te.dros performed on 2019-03-15 12:20:45 has no hits.

IP09733.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:21:49 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12109795..12110656 1..862 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:42:13 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
CG16997-RA 11..822 1..812 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:16:43 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
CG16997-RB 1..798 15..812 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:40:57 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
Phae2-RB 1..798 15..812 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:01:07 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
CG16997-RA 11..822 1..812 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:57:44 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
Phae2-RB 1..798 15..812 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:16:00 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
CG16997-RA 11..822 1..812 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:16:43 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
CG16997-RB 2..863 1..862 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:40:57 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
Phae2-RB 25..886 1..862 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:01:07 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
CG16997-RA 11..822 1..812 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:57:44 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
Phae2-RB 25..886 1..862 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:21:49 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12111134..12111995 1..862 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:21:49 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12111134..12111995 1..862 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:21:49 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12111134..12111995 1..862 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:40:57 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12111134..12111995 1..862 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:36:47 Download gff for IP09733.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12111134..12111995 1..862 100   Plus

IP09733.pep Sequence

Translation from 2 to 811

> IP09733.pep
GQQTMWRHRHLATILLLAVCVSQGSGLALDQPEGRVVGGKAAAANSAPYI
VSMQYGGTHYCAANIINSNWLVTAAHCLANRNQVLGSTLVAGSIAVAGTA
STTQKRQITHYVINDLYTGGTVPYDIGLIYTPTAFTWTAAVAPVKLPSSG
VRPTGKADLFGWGSTSKTNSPSYPKTLQEAKNIPIISLDSCAAALGSKGQ
DVHTTNLCTGPLTGGTSFCTSDSGGPLVQGNVLIGIVSWGKLPCGQPNSP
SVYVQVSSFITWIAANQKK*

IP09733.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21569-PA 268 GF21569-PA 1..265 5..267 1006 73.2 Plus
Dana\GF21567-PA 275 GF21567-PA 5..272 1..267 979 76.9 Plus
Dana\GF23147-PA 335 GF23147-PA 80..324 35..263 604 47.6 Plus
Dana\GF24882-PA 267 GF24882-PA 5..264 14..269 386 35.6 Plus
Dana\GF24871-PA 277 GF24871-PA 35..270 34..267 369 37.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23769-PA 270 GG23769-PA 5..268 1..268 1082 78.4 Plus
Dere\GG23770-PA 200 GG23770-PA 6..185 3..182 858 90.6 Plus
Dere\GG16564-PA 334 GG16564-PA 79..323 35..263 612 48.4 Plus
Dere\GG24657-PA 277 GG24657-PA 35..270 34..267 384 38 Plus
Dere\GG24658-PA 273 GG24658-PA 3..271 10..268 344 37.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11580-PA 273 GH11580-PA 36..272 32..268 980 78.5 Plus
Dgri\GH22284-PA 327 GH22284-PA 61..316 29..263 587 45.9 Plus
Dgri\GH22535-PA 277 GH22535-PA 35..270 34..267 376 36.8 Plus
Dgri\GH11151-PA 277 GH11151-PA 35..270 34..267 376 36.8 Plus
Dgri\GH22534-PA 277 GH22534-PA 35..270 34..267 376 36.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
Phae2-PC 265 CG16997-PC 1..265 5..269 1395 100 Plus
Phae2-PB 265 CG16997-PB 1..265 5..269 1395 100 Plus
Phae1-PB 270 CG16996-PB 5..268 1..268 1088 77.6 Plus
Phae1-PA 270 CG16996-PA 5..268 1..268 1088 77.6 Plus
CG7142-PA 334 CG7142-PA 84..323 40..263 597 49.4 Plus
CG11911-PA 277 CG11911-PA 7..266 13..263 396 36.1 Plus
CG11912-PA 271 CG11912-PA 6..269 15..268 375 38.2 Plus
gammaTry-PA 253 CG30028-PA 6..252 14..266 349 33.6 Plus
deltaTry-PA 253 CG12351-PA 6..252 14..266 349 33.6 Plus
CG30031-PA 253 CG30031-PA 6..252 14..266 349 33.6 Plus
CG30025-PA 253 CG30025-PA 6..252 14..266 346 33.6 Plus
alphaTry-PA 256 CG18444-PA 6..251 14..265 329 31.4 Plus
betaTry-PB 253 CG18211-PB 6..252 14..266 324 30.4 Plus
betaTry-PA 253 CG18211-PA 6..252 14..266 324 30.4 Plus
thetaTry-PA 262 CG12385-PA 4..255 14..263 301 33.7 Plus
lambdaTry-PA 272 CG12350-PA 4..256 16..263 300 30 Plus
CG7829-PA 253 CG7829-PA 13..245 23..263 298 34.1 Plus
Ser8-PA 260 CG4812-PA 33..258 34..268 297 31.1 Plus
kappaTry-PC 263 CG12388-PC 5..253 14..263 288 32.1 Plus
Sb-PB 787 CG4316-PB 537..782 29..263 283 31.5 Plus
Sb-PA 787 CG4316-PA 537..782 29..263 283 31.5 Plus
Try29F-PD 267 CG9564-PD 16..263 10..265 282 31.4 Plus
Try29F-PC 267 CG9564-PC 16..263 10..265 282 31.4 Plus
epsilonTry-PA 256 CG18681-PA 5..249 12..263 281 30.6 Plus
CG8299-PA 260 CG8299-PA 28..252 36..263 276 33.3 Plus
CG11836-PI 281 CG11836-PI 42..273 33..266 267 28.1 Plus
CG11836-PJ 333 CG11836-PJ 94..325 33..266 267 28.1 Plus
etaTry-PA 262 CG12386-PA 8..255 16..264 264 30 Plus
CG12951-PA 265 CG12951-PA 9..261 11..267 261 31.3 Plus
CG8172-PD 371 CG8172-PD 125..362 35..263 261 31.1 Plus
CG4386-PA 372 CG4386-PA 126..354 35..263 261 30.5 Plus
CG8172-PE 545 CG8172-PE 299..536 35..263 261 31.1 Plus
CG8172-PF 561 CG8172-PF 315..552 35..263 261 31.1 Plus
CG3650-PA 249 CG3650-PA 1..249 5..269 260 30.3 Plus
CG17571-PB 258 CG17571-PB 6..251 11..263 259 29.3 Plus
CG17571-PA 258 CG17571-PA 6..251 11..263 259 29.3 Plus
CG13430-PB 267 CG13430-PB 10..260 14..264 259 30.6 Plus
CG13430-PA 267 CG13430-PA 10..260 14..264 259 30.6 Plus
zetaTry-PA 280 CG12387-PA 9..275 11..265 259 30.5 Plus
CG16749-PA 265 CG16749-PA 18..261 25..267 258 30.6 Plus
Jon99Cii-PA 265 CG31034-PA 33..260 33..266 257 34.3 Plus
Jon99Ciii-PB 265 CG31362-PB 33..260 33..266 257 34.3 Plus
Jon99Ciii-PA 265 CG31362-PA 33..260 33..266 257 34.3 Plus
CG32755-PA 315 CG32755-PA 37..271 35..263 255 31.2 Plus
CG18735-PA 364 CG18735-PA 82..316 35..268 255 31.4 Plus
CG16998-PA 258 CG16998-PA 2..242 10..263 253 27.5 Plus
CG17234-PA 251 CG17234-PA 24..243 33..263 252 32.9 Plus
CG34458-PA 257 CG34458-PA 11..254 13..266 252 29.3 Plus
CG10477-PB 272 CG10477-PB 6..264 14..263 252 31.2 Plus
CG10477-PA 272 CG10477-PA 6..264 14..263 252 31.2 Plus
Jon65Aiii-PA 274 CG6483-PA 32..269 28..266 251 31.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:19:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17150-PA 251 GI17150-PA 1..249 14..268 983 76.1 Plus
Dmoj\GI23092-PA 326 GI23092-PA 71..315 35..263 596 48 Plus
Dmoj\GI17855-PA 278 GI17855-PA 33..271 32..267 370 36.1 Plus
Dmoj\GI17857-PA 267 GI17857-PA 26..260 32..263 349 39.3 Plus
Dmoj\GI17856-PA 265 GI17856-PA 26..258 32..263 341 36.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19241-PA 266 GL19241-PA 1..262 5..267 995 77.9 Plus
Dper\GL22122-PA 336 GL22122-PA 81..325 35..263 600 47.2 Plus
Dper\GL19275-PA 277 GL19275-PA 4..270 11..267 374 34.8 Plus
Dper\GL19276-PA 271 GL19276-PA 2..268 9..269 353 35 Plus
Dper\GL13444-PA 259 GL13444-PA 28..253 35..269 286 32.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:19:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14265-PA 266 GA14265-PA 1..262 5..267 989 77.9 Plus
Dpse\GA20132-PA 336 GA20132-PA 81..325 35..263 601 47.2 Plus
Dpse\GA11277-PA 277 GA11277-PA 4..270 11..267 375 34.8 Plus
Dpse\GA25897-PA 271 GA25897-PA 5..268 14..269 348 34.7 Plus
Dpse\GA15051-PA 256 GA15051-PA 5..249 13..263 297 31 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26739-PA 273 GM26739-PA 5..272 1..268 1361 97 Plus
Dsec\GM21910-PA 217 GM21910-PA 1..216 53..268 1109 98.1 Plus
Dsec\GM26738-PA 263 GM26738-PA 25..261 25..268 990 79.1 Plus
Dsec\GM15310-PA 334 GM15310-PA 79..323 35..263 611 48.4 Plus
Dsec\GM16677-PA 277 GM16677-PA 35..270 34..267 372 38 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23820-PA 273 GD23820-PA 5..272 1..268 1358 96.6 Plus
Dsim\GD23819-PA 270 GD23819-PA 25..268 25..268 1050 81.6 Plus
Dsim\GD20188-PA 334 GD20188-PA 79..323 35..263 611 48.4 Plus
Dsim\GD22965-PA 277 GD22965-PA 7..270 13..267 390 36.3 Plus
Dsim\GD22966-PA 271 GD22966-PA 6..269 15..268 387 40.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17654-PA 277 GJ17654-PA 35..275 30..268 1019 81.3 Plus
Dvir\GJ22712-PA 326 GJ22712-PA 60..315 29..263 582 45.5 Plus
Dvir\GJ17354-PA 277 GJ17354-PA 35..270 34..267 385 39.1 Plus
Dvir\GJ17353-PA 277 GJ17353-PA 35..270 34..267 384 37.6 Plus
Dvir\GJ17355-PA 269 GJ17355-PA 26..262 32..263 316 35.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21089-PA 276 GK21089-PA 9..272 11..267 1005 73.5 Plus
Dwil\GK22780-PA 335 GK22780-PA 80..324 35..263 607 48.4 Plus
Dwil\GK23887-PA 278 GK23887-PA 36..271 34..267 391 38.8 Plus
Dwil\GK23888-PA 268 GK23888-PA 26..268 32..269 328 34.9 Plus
Dwil\GK22079-PA 257 GK22079-PA 24..251 33..269 309 33.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18574-PA 273 GE18574-PA 5..272 1..268 1327 94.4 Plus
Dyak\GE18573-PA 270 GE18573-PA 21..268 21..268 1052 81 Plus
Dyak\GE25219-PA 334 GE25219-PA 79..323 35..263 609 48.4 Plus
Dyak\GE16206-PA 277 GE16206-PA 7..266 13..263 380 35.6 Plus
Dyak\GE16217-PA 271 GE16217-PA 26..269 32..268 343 38.5 Plus

IP09733.hyp Sequence

Translation from 2 to 811

> IP09733.hyp
GQQTMWRHRHLATILLLAVCVSQGSGLALDQPEGRVVGGKAAAANSAPYI
VSMQYGGTHYCAANIINSNWLVTAAHCLANRNQVLGSTLVAGSIAVAGTA
STTQKRQITHYVINDLYTGGTVPYDIGLIYTPTAFTWTAAVAPVKLPSSG
VRPTGKADLFGWGSTSKTNSPSYPKTLQEAKNIPIISLDSCAAALGSKGQ
DVHTTNLCTGPLTGGTSFCTSDSGGPLVQGNVLIGIVSWGKLPCGQPNSP
SVYVQVSSFITWIAANQKK*

IP09733.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
Phae2-PC 265 CG16997-PC 1..265 5..269 1395 100 Plus
Phae2-PB 265 CG16997-PB 1..265 5..269 1395 100 Plus
Phae1-PB 270 CG16996-PB 5..268 1..268 1088 77.6 Plus
Phae1-PA 270 CG16996-PA 5..268 1..268 1088 77.6 Plus
CG7142-PA 334 CG7142-PA 84..323 40..263 597 49.4 Plus