Clone IP09768 Report

Search the DGRC for IP09768

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:97
Well:68
Vector:pOT2
Associated Gene/TranscriptCG30486-RB
Protein status:IP09768.pep: gold
Preliminary Size:792
Sequenced Size:854

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30486 2008-04-29 Release 5.5 accounting
CG30486 2008-08-15 Release 5.9 accounting
CG30486 2008-12-18 5.12 accounting

Clone Sequence Records

IP09768.complete Sequence

854 bp (854 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023554

> IP09768.complete
CGAGATCGGCACCAGATGTTGTACCTTCTTTCAGTCCTTATAATAGTCCT
TATCAGCCAGGAGGCGTTATCTACGGATTACTGCAACAAGGATCTGTGTC
TGCCGGAAATAACGCATATCGCTTGCCGCAATTATGGCTTGTGGCAGTGA
AGCGATCATCATGAAGTTTCCCATGCACATGCGTGCCCATCTCCTGGCCG
TCCTAAACGATTTTCGGAATACCGTGGCTAAGGGTCAGTATCCGCACTTG
CGTCCAGCTTCCCGGATGGCAACACTCCGGTGGCACGAGGAACTGGCCGG
GTTGGCCAAGTTTGCCTTGAGGCGTTGTGACTATATAGACGATTACTGCA
GCAATACGGATGAGTTCAGCTATGTGTCGTATATATATGGCAGTACCAAG
TGGTTGCAACTGGAGAAGGATCCCATATCCGTTTTGGACTTTGTCTTGCA
GTTTTGGATGGATGATGTTAAGGGCTGCACGATGGCCCACATCAATGCCG
AGAAACCGGCCAAGGATGGACAGTGTCGCGGCTACTTCACCCAGCTGGTC
CAAGATTTGGCTGCCCATGTCGGCTGTGCCATGATGCTGCGAAAAGGCCA
AACGAGCGGACTCTATCAGTACGGTGTCCTATGTCACTTTTCGCGCGGAA
AGATCGCCAATGAGCTGGTCTACCGGGCAAGTGCTCATCCGGGAAGTCGC
TGCTATGCGGGAACCCACTCCATATATGAGGGGCTCTGCTCACCCGAGGA
GCATGTTAATCCCAATGCCCTGCAATTGGGCGAGCTTAATTGATTCGTTC
ATGCTGCATTTAATAAATCTAGGTCATAAGATAAAAAAAAAAAAAAAAAA
AAAA

IP09768.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG30486-RB 828 CG30486-RB 1..828 5..832 4140 100 Plus
CG30486-RA 842 CG30486-RA 149..842 139..832 3470 100 Plus
CG30486-RA 842 CG30486-RA 1..134 5..138 670 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8735698..8736078 519..139 1905 100 Minus
chr2R 21145070 chr2R 8735334..8735647 832..519 1570 100 Minus
chr2R 21145070 chr2R 8736143..8736276 138..5 670 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12848398..12848778 519..139 1905 100 Minus
2R 25286936 2R 12848033..12848347 833..519 1575 100 Minus
2R 25286936 2R 12848843..12848976 138..5 670 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:26:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12849597..12849977 519..139 1905 100 Minus
2R 25260384 2R 12849232..12849546 833..519 1575 100 Minus
2R 25260384 2R 12850042..12850175 138..5 670 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:47:08 has no hits.

IP09768.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:48:02 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8735334..8735646 520..832 100 <- Minus
chr2R 8735698..8736078 139..519 100 <- Minus
chr2R 8736143..8736278 1..138 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:42:34 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..660 134..793 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:00:34 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..660 134..793 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:07 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RA 1..121 16..136 100 -> Plus
CG30486-RA 136..792 137..793 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:41:05 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..660 134..793 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:59:20 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RA 1..121 16..136 100 -> Plus
CG30486-RA 136..792 137..793 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:43:29 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..828 5..832 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:00:34 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..828 5..832 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:07 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..828 5..832 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:41:05 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 1..828 5..832 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:59:20 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
CG30486-RB 16..845 1..832 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:02 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12848843..12848978 1..138 98   Minus
2R 12848034..12848346 520..832 100 <- Minus
2R 12848398..12848778 139..519 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:02 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12848843..12848978 1..138 98   Minus
2R 12848034..12848346 520..832 100 <- Minus
2R 12848398..12848778 139..519 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:02 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12848843..12848978 1..138 98   Minus
2R 12848034..12848346 520..832 100 <- Minus
2R 12848398..12848778 139..519 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:07 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8736348..8736483 1..138 98   Minus
arm_2R 8735903..8736283 139..519 100 <- Minus
arm_2R 8735539..8735851 520..832 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:20:04 Download gff for IP09768.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12849597..12849977 139..519 100 <- Minus
2R 12850042..12850177 1..138 98   Minus
2R 12849233..12849545 520..832 100 <- Minus

IP09768.hyp Sequence

Translation from 133 to 792

> IP09768.hyp
MACGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQYPHLRPASRMATLRW
HEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISV
LDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRGYFTQLVQDLAAHVGCAM
MLRKGQTSGLYQYGVLCHFSRGKIANELVYRASAHPGSRCYAGTHSIYEG
LCSPEEHVNPNALQLGELN*

IP09768.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:20:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG30486-PB 219 CG30486-PB 1..219 1..219 1187 100 Plus
CG30486-PA 263 CG30486-PA 46..263 2..219 1179 99.5 Plus
CG17575-PA 291 CG17575-PA 50..280 3..206 301 29.4 Plus
antr-PA 265 CG30488-PA 42..249 3..213 287 31.5 Plus
antr-PB 272 CG30488-PB 49..256 3..213 287 31.5 Plus

IP09768.pep Sequence

Translation from 133 to 792

> IP09768.pep
MACGSEAIIMKFPMHMRAHLLAVLNDFRNTVAKGQYPHLRPASRMATLRW
HEELAGLAKFALRRCDYIDDYCSNTDEFSYVSYIYGSTKWLQLEKDPISV
LDFVLQFWMDDVKGCTMAHINAEKPAKDGQCRGYFTQLVQDLAAHVGCAM
MLRKGQTSGLYQYGVLCHFSRGKIANELVYRASAHPGSRCYAGTHSIYEG
LCSPEEHVNPNALQLGELN*

IP09768.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:55:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12002-PA 262 GF12002-PA 45..262 2..219 876 69.7 Plus
Dana\GF12004-PA 289 GF12004-PA 48..278 2..206 298 28.9 Plus
Dana\GF12003-PA 273 GF12003-PA 45..256 3..213 279 29.1 Plus
Dana\GF12998-PA 288 GF12998-PA 45..250 3..213 277 31.3 Plus
Dana\GF18358-PA 499 GF18358-PA 87..288 3..206 256 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:55:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22546-PA 263 GG22546-PA 46..263 2..219 1099 90.8 Plus
Dere\GG22549-PA 301 GG22549-PA 53..290 3..206 290 28.1 Plus
Dere\GG22547-PA 265 GG22547-PA 42..249 3..213 284 31.3 Plus
Dere\GG22996-PA 308 GG22996-PA 51..255 3..213 266 30.3 Plus
Dere\GG19449-PA 256 GG19449-PA 44..255 2..214 253 29.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:55:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21186-PA 270 GH21186-PA 55..263 3..211 241 31 Plus
Dgri\GH12214-PA 256 GH12214-PA 45..254 3..213 236 28.5 Plus
Dgri\GH24944-PA 305 GH24944-PA 79..278 2..202 214 28.6 Plus
Dgri\GH12213-PA 256 GH12213-PA 56..252 9..206 213 30 Plus
Dgri\GH24697-PA 274 GH24697-PA 63..270 3..211 199 30.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG30486-PA 263 CG30486-PA 46..263 2..219 1179 99.5 Plus
CG17575-PA 291 CG17575-PA 50..280 3..206 301 29.4 Plus
antr-PA 265 CG30488-PA 42..249 3..213 287 31.5 Plus
antr-PB 272 CG30488-PB 49..256 3..213 287 31.5 Plus
CG17575-PB 298 CG17575-PB 50..287 3..206 283 28.5 Plus
Ag5r-PC 256 CG9538-PC 44..254 2..213 255 29.3 Plus
Ag5r-PB 256 CG9538-PB 44..254 2..213 255 29.3 Plus
Ag5r-PA 256 CG9538-PA 44..254 2..213 255 29.3 Plus
CG3640-PA 296 CG3640-PA 51..255 3..213 242 28.9 Plus
CG9822-PA 263 CG9822-PA 72..259 25..211 230 32.8 Plus
CG34002-PB 350 CG34002-PB 55..257 3..208 220 31.3 Plus
Ag5r2-PA 254 CG9540-PA 67..253 25..212 211 29.1 Plus
CG9400-PA 308 CG9400-PA 81..268 2..190 206 29.3 Plus
CG42564-PA 500 CG10284-PA 80..281 3..206 199 28.4 Plus
CG32679-PA 254 CG32679-PA 64..250 20..211 183 29.2 Plus
CG17974-PA 259 CG17974-PA 50..258 3..211 183 27 Plus
CG31296-PB 280 CG31296-PB 64..254 20..211 174 29.4 Plus
CG31296-PA 280 CG31296-PA 64..254 20..211 174 29.4 Plus
CG8072-PA 247 CG8072-PA 59..240 15..202 160 25.1 Plus
CG6628-PA 277 CG6628-PA 72..258 20..206 154 26.2 Plus
scpr-B-PA 262 CG17210-PA 44..248 3..206 149 24.9 Plus
scpr-C-PB 262 CG5106-PB 44..248 3..206 149 24.9 Plus
scpr-C-PA 262 CG5106-PA 44..248 3..206 149 24.9 Plus
scpr-A-PA 264 CG5207-PA 46..250 3..206 149 24.9 Plus
CG10651-PB 316 CG10651-PB 51..253 7..208 147 25.4 Plus
CG10651-PA 316 CG10651-PA 51..253 7..208 147 25.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:55:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20220-PA 283 GI20220-PA 50..270 2..206 310 31.1 Plus
Dmoj\GI15747-PA 256 GI15747-PA 44..255 2..214 274 30.4 Plus
Dmoj\GI20219-PA 245 GI20219-PA 9..221 3..215 253 29 Plus
Dmoj\GI20472-PA 267 GI20472-PA 54..263 2..211 252 31.6 Plus
Dmoj\GI15744-PA 256 GI15744-PA 56..255 9..209 227 31 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17454-PA 264 GL17454-PA 47..264 2..219 764 62.8 Plus
Dper\GL17456-PA 291 GL17456-PA 51..287 2..216 314 30.3 Plus
Dper\GL12693-PA 296 GL12693-PA 47..248 3..206 245 31.9 Plus
Dper\GL17455-PA 274 GL17455-PA 54..263 2..211 244 29.9 Plus
Dper\GL20409-PA 257 GL20409-PA 44..255 2..213 241 26.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24199-PA 264 GA24199-PA 47..264 2..219 766 62.8 Plus
Dpse\GA24199-PB 206 GA24199-PB 1..206 14..219 734 63.6 Plus
Dpse\GA14563-PA 291 GA14563-PA 51..287 2..216 318 29.8 Plus
Dpse\GA14563-PB 298 GA14563-PB 51..294 2..216 302 29 Plus
Dpse\GA24200-PB 267 GA24200-PB 47..256 2..211 258 30.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20331-PA 263 GM20331-PA 46..263 2..219 1168 97.7 Plus
Dsec\GM20333-PA 291 GM20333-PA 50..280 3..206 315 29.7 Plus
Dsec\GM20332-PA 265 GM20332-PA 42..249 3..213 300 32.4 Plus
Dsec\GM12039-PA 256 GM12039-PA 44..255 2..214 258 29.6 Plus
Dsec\GM11889-PA 296 GM11889-PA 49..255 1..213 252 28.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25808-PA 263 GD25808-PA 46..263 2..219 1166 97.7 Plus
Dsim\GD25810-PA 291 GD25810-PA 50..280 3..206 314 29.7 Plus
Dsim\GD25809-PA 265 GD25809-PA 42..249 3..213 304 32.4 Plus
Dsim\GD11888-PA 299 GD11888-PA 49..255 1..213 253 29.1 Plus
Dsim\GD25203-PA 263 GD25203-PA 50..259 2..211 236 30.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20170-PA 288 GJ20170-PA 49..275 2..206 314 30.3 Plus
Dvir\GJ20169-PA 337 GJ20169-PA 62..256 16..211 263 32 Plus
Dvir\GJ24603-PA 345 GJ24603-PA 9..207 2..203 254 31.2 Plus
Dvir\GJ18606-PA 256 GJ18606-PA 44..255 2..214 245 27.8 Plus
Dvir\GJ22322-PA 262 GJ22322-PA 50..258 3..211 245 30.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20884-PA 274 GK20884-PA 44..264 2..206 320 31.4 Plus
Dwil\GK20882-PA 255 GK20882-PA 41..255 2..217 308 31.5 Plus
Dwil\GK18446-PA 263 GK18446-PA 50..261 2..213 246 29.2 Plus
Dwil\GK15903-PA 518 GK15903-PA 51..252 3..206 228 28.8 Plus
Dwil\GK20746-PA 265 GK20746-PA 54..263 3..211 223 28 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13416-PA 263 GE13416-PA 46..263 2..219 1115 92.7 Plus
Dyak\GE13419-PA 300 GE13419-PA 52..289 3..206 305 29.3 Plus
Dyak\GE13418-PA 265 GE13418-PA 42..249 3..213 297 31.9 Plus
Dyak\GE14433-PA 296 GE14433-PA 51..255 3..213 280 32.7 Plus
Dyak\Ag5r-PA 256 GE16102-PA 44..255 2..214 271 30.1 Plus