Clone IP09794 Report

Search the DGRC for IP09794

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:97
Well:94
Vector:pOT2
Associated Gene/TranscriptCG32040-RA
Protein status:IP09794.pep: validated not full length
Preliminary Size:942
Sequenced Size:1085

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32040 2008-04-29 Release 5.5 accounting
CG32040 2008-08-15 Release 5.9 accounting
CG32040 2008-12-18 5.12 accounting

Clone Sequence Records

IP09794.complete Sequence

1085 bp (1085 high quality bases) assembled on 2005-08-26

GenBank Submission: BT023860

> IP09794.complete
ACAAGTCGCTGGCTGCTATTAAGTTTGCTACTCTATTGGGGTAGCCAGGA
GGTCTCCTCGGGTGTGATGGACAACTTTGGCGATGGCTTGAAAATGGCCG
GGCAAATGTTTGGCATCAATACGGCAGCAGATGTGGCAAATCTGGTAGCC
AAGGCATTCTCCGGCAATTCTATGGCAAATGTACCCAATTTGATTAGCTA
CGCCCAGAGTGGATTCCAAGGGCTGCGGCAAAACAATGGTGCGGATGAAC
AGGAGGAGGATCAATCGGAGCAGCAATCGGAAACGGAAAATGTCCAGGAA
GAACCTCCGGTGGAGAACACAACCCGAAAACCTCCTCCGATAACCTTCGA
TTCCGGGCAAATGCTCTCCAATATGTTGAGAATGGTGGGTTTTGATACGC
GGAAAATAGGAGCCCTAGCCTTAAATGCATTGATTATGGTTGCTCAGGCG
ATTGGTAGCTCCCTGCTGCAGGTTACTCGGGGAGGTGGAACATCTTTAAT
CGATGCTACGGAATCCCTGTATGAACCCAGCGATCATCGACCACGTTCCC
TATCCATGGGATCGCCCATCGATTGGTTTATGCAACGTACAGATCGCTAT
AGCAAACGACTAATCAAGGATATCATGGATCGGGATTTGCCCGACTACAT
ACTAGACATGATCGAAGCCAAGGAACAACCCGAGGAGGGTAAAACCGCTG
GTTGCCTAAAGCTTCTGATGTGCAAGGGTCAACCAATCATTTGGGGAATG
CAGGAATCGTTAAAGAAACGCCTGGCTGGAGAACCTGAAGAGCCCGATGA
TAACGATAGCTACTTTAACAAGAAAATCTTATTTAAACACTTGCCCAGTC
TTGAGGATTTTAGGAACCATAGTGCTAGCTGTGAAGTCAAATACCACGAG
GAGTGCCCCAAGAATGCAACAACGGGAAGCTATTTTTAAGTGCACTTAAC
AAAAAAAATAATGCTACAAAGTAATTAAGATATGATACATTTTGAAATAC
ACGAAAACTTATTATTCTCTCATACATGGAAATAAAGTACAGTAGTTTGT
TAAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP09794.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:29:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG32040-RA 1364 CG32040-RA 307..1364 1..1058 5290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:36:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9346778..9347386 450..1058 3045 100 Plus
chr3L 24539361 chr3L 9346268..9346717 1..450 2250 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9354849..9355458 450..1059 3050 100 Plus
3L 28110227 3L 9354339..9354788 1..450 2250 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9347949..9348558 450..1059 3050 100 Plus
3L 28103327 3L 9347439..9347888 1..450 2250 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:36:50 has no hits.

IP09794.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:37:28 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9346268..9346717 1..450 100 -> Plus
chr3L 9346779..9347386 451..1058 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:42:43 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:52:03 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:42:09 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:32:44 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:43:04 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:26:22 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:52:03 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 307..1364 1..1058 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:42:09 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 307..1364 1..1058 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:44 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 4..942 1..939 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:43:04 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
CG32040-RA 307..1364 1..1058 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:37:28 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9354339..9354788 1..450 100 -> Plus
3L 9354850..9355457 451..1058 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:37:28 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9354339..9354788 1..450 100 -> Plus
3L 9354850..9355457 451..1058 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:37:28 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9354339..9354788 1..450 100 -> Plus
3L 9354850..9355457 451..1058 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:42:09 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9347439..9347888 1..450 100 -> Plus
arm_3L 9347950..9348557 451..1058 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:11:18 Download gff for IP09794.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9347439..9347888 1..450 100 -> Plus
3L 9347950..9348557 451..1058 100   Plus

IP09794.pep Sequence

Translation from 0 to 938

> IP09794.pep
TSRWLLLSLLLYWGSQEVSSGVMDNFGDGLKMAGQMFGINTAADVANLVA
KAFSGNSMANVPNLISYAQSGFQGLRQNNGADEQEEDQSEQQSETENVQE
EPPVENTTRKPPPITFDSGQMLSNMLRMVGFDTRKIGALALNALIMVAQA
IGSSLLQVTRGGGTSLIDATESLYEPSDHRPRSLSMGSPIDWFMQRTDRY
SKRLIKDIMDRDLPDYILDMIEAKEQPEEGKTAGCLKLLMCKGQPIIWGM
QESLKKRLAGEPEEPDDNDSYFNKKILFKHLPSLEDFRNHSASCEVKYHE
ECPKNATTGSYF*

IP09794.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:05:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10682-PA 313 GF10682-PA 2..313 1..312 1143 66.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15360-PA 313 GG15360-PA 2..313 1..312 1441 92.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15174-PA 331 GH15174-PA 14..324 9..307 864 53.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG32040-PA 313 CG32040-PA 2..313 1..312 1626 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12113-PA 314 GI12113-PA 28..310 28..307 794 55.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18431-PA 314 GL18431-PA 2..314 1..311 945 60.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16630-PA 314 GA16630-PA 2..314 1..311 943 60.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25132-PA 313 GM25132-PA 2..313 1..312 1497 94.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14169-PA 313 GD14169-PA 2..313 1..312 1631 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13387-PA 306 GJ13387-PA 4..304 3..309 886 57.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23832-PA 332 GK23832-PA 9..326 5..307 903 56.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20822-PA 314 GE20822-PA 2..314 1..312 1383 88.2 Plus

IP09794.hyp Sequence

Translation from 0 to 938

> IP09794.hyp
TSRWLLLSLLLYWGSQEVSSGVMDNFGDGLKMAGQMFGINTAADVANLVA
KAFSGNSMANVPNLISYAQSGFQGLRQNNGADEQEEDQSEQQSETENVQE
EPPVENTTRKPPPITFDSGQMLSNMLRMVGFDTRKIGALALNALIMVAQA
IGSSLLQVTRGGGTSLIDATESLYEPSDHRPRSLSMGSPIDWFMQRTDRY
SKRLIKDIMDRDLPDYILDMIEAKEQPEEGKTAGCLKLLMCKGQPIIWGM
QESLKKRLAGEPEEPDDNDSYFNKKILFKHLPSLEDFRNHSASCEVKYHE
ECPKNATTGSYF*

IP09794.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32040-PA 313 CG32040-PA 2..313 1..312 1626 100 Plus