Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP09810.complete Sequence
999 bp (999 high quality bases) assembled on 2006-01-17
GenBank Submission: BT024340
> IP09810.complete
TCGAGAAATATGGACCGAAATAAGCCACTCAGACTAATTGGCCTCTCCAG
TACCGAGCCCGAAAAACAAACGAAACTTACACTGAACCATCTATGTCAGC
TGCCAGCACAATGTCCCATAGAAAAATGCATTTCCACCGTTTTCAAGGAT
GATATGCTCCAACATTTGGCCCAACGCCATTTCCGATCAAATGTGAAAAA
GCATTTGCAAGTGGCCTTCAACGGAGAACGCTGTACCCTGGTCTTTGATG
TTTCTCAGCTGATTGGAACGCAGACCATATGTCTGGGAGTTCTTCTTTAC
GGCGGCGTGCGTGGTAAGCATAGCCAATTACCCGGAGAACGAGAATTCTG
TTATCACAATCGATTGAAAGAGGATTCGGGGCTGGAATCGCTGAAGGACT
ATCTGCCCATTATGGTGCTGGTGAAGAGGACAACATTCCTCTGCTGGGCA
CTTGTGGACAGAAAAATGGAATCGCAAGAAGATCTTAATGGTAAACAGTC
AAAAGATCTTAAGCAGGTAAAACATCTAGATTTCTCAAATGATACGCATC
CCAAATGCAGTGAAGAATCGATCAAAAGGTGCGATAGTGGCCAAAAGAAT
AACGATCTAAAGACGACCACTGAAGCCGAGCAGGAAGAGATTATGGACTC
CGATATCTTGATAATTTGGACCCAAAGTGCACCCTGCATCCGACCACTCC
ACGTTGCCATGACCGTATTCAACAGCACCTTGTCGGTTGGCCGGAGCGCC
ATGCGTTGTGTGGCAAATTCGGGCCAAATGTATACCGAAATCGGTGGCAA
GGATCTGCCCAAGGACCGGCATTCCCTTTTGATAACGCAGCAAGAATTGA
AGGAGATATGTGGCGCAGAACATCATCTCCATCTCGAACTGATCCTGCAT
GAGCCTTTGGAATAACCGGCAGCCTGAGATTTTGTTTATTTTTACCTTAT
AATTGCATTTATTAAAGCGGAGTGTGCAGAAAAAAAAAAAAAAAAAAAA
IP09810.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:22:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15472-RA | 979 | CG15472-RA | 1..979 | 1..979 | 4895 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:59:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 4661872..4662850 | 979..1 | 4880 | 99.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4769103..4770083 | 981..1 | 4905 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:14:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 4777201..4778181 | 981..1 | 4905 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 09:59:08 has no hits.
IP09810.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:59:52 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 4661872..4662850 | 1..979 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:42:56 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:38:49 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:54:15 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:13:59 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:51:55 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:10:52 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:38:49 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..979 | 1..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:15 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 55..1033 | 1..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:14:00 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 1..906 | 10..915 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:51:55 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15472-RA | 55..1033 | 1..979 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:52 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4769105..4770083 | 1..979 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:52 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4769105..4770083 | 1..979 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:52 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4769105..4770083 | 1..979 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:15 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4663138..4664116 | 1..979 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:01:41 Download gff for
IP09810.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4777203..4778181 | 1..979 | 100 | | Minus |
IP09810.hyp Sequence
Translation from 0 to 914
> IP09810.hyp
SRNMDRNKPLRLIGLSSTEPEKQTKLTLNHLCQLPAQCPIEKCISTVFKD
DMLQHLAQRHFRSNVKKHLQVAFNGERCTLVFDVSQLIGTQTICLGVLLY
GGVRGKHSQLPGEREFCYHNRLKEDSGLESLKDYLPIMVLVKRTTFLCWA
LVDRKMESQEDLNGKQSKDLKQVKHLDFSNDTHPKCSEESIKRCDSGQKN
NDLKTTTEAEQEEIMDSDILIIWTQSAPCIRPLHVAMTVFNSTLSVGRSA
MRCVANSGQMYTEIGGKDLPKDRHSLLITQQELKEICGAEHHLHLELILH
EPLE*
IP09810.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:21:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15472-PA | 301 | CG15472-PA | 1..301 | 4..304 | 1588 | 100 | Plus |
IP09810.pep Sequence
Translation from 9 to 914
> IP09810.pep
MDRNKPLRLIGLSSTEPEKQTKLTLNHLCQLPAQCPIEKCISTVFKDDML
QHLAQRHFRSNVKKHLQVAFNGERCTLVFDVSQLIGTQTICLGVLLYGGV
RGKHSQLPGEREFCYHNRLKEDSGLESLKDYLPIMVLVKRTTFLCWALVD
RKMESQEDLNGKQSKDLKQVKHLDFSNDTHPKCSEESIKRCDSGQKNNDL
KTTTEAEQEEIMDSDILIIWTQSAPCIRPLHVAMTVFNSTLSVGRSAMRC
VANSGQMYTEIGGKDLPKDRHSLLITQQELKEICGAEHHLHLELILHEPL
E*
IP09810.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:27:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20345-PA | 274 | GF20345-PA | 20..266 | 22..298 | 417 | 37.1 | Plus |
Dana\GF20347-PA | 819 | GF20347-PA | 44..180 | 16..155 | 157 | 28.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:27:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18518-PA | 308 | GG18518-PA | 1..308 | 1..301 | 902 | 57.6 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:27:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH17077-PA | 303 | GH17077-PA | 15..150 | 18..156 | 151 | 28.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15472-PA | 301 | CG15472-PA | 1..301 | 1..301 | 1588 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:27:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12668-PA | 226 | GM12668-PA | 1..226 | 49..301 | 883 | 68.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD16276-PA | 140 | GD16276-PA | 1..140 | 135..301 | 516 | 62.9 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:27:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK25313-PA | 363 | GK25313-PA | 53..187 | 19..156 | 177 | 32.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16835-PA | 310 | GE16835-PA | 1..310 | 1..301 | 914 | 58.1 | Plus |