Clone IP09810 Report

Search the DGRC for IP09810

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:98
Well:10
Vector:pOT2
Associated Gene/TranscriptCG15472-RA
Protein status:IP09810.pep: gold
Preliminary Size:906
Sequenced Size:999

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15472 2008-04-29 Release 5.5 accounting
CG15472 2008-08-15 Release 5.9 accounting
CG15472 2008-12-18 5.12 accounting

Clone Sequence Records

IP09810.complete Sequence

999 bp (999 high quality bases) assembled on 2006-01-17

GenBank Submission: BT024340

> IP09810.complete
TCGAGAAATATGGACCGAAATAAGCCACTCAGACTAATTGGCCTCTCCAG
TACCGAGCCCGAAAAACAAACGAAACTTACACTGAACCATCTATGTCAGC
TGCCAGCACAATGTCCCATAGAAAAATGCATTTCCACCGTTTTCAAGGAT
GATATGCTCCAACATTTGGCCCAACGCCATTTCCGATCAAATGTGAAAAA
GCATTTGCAAGTGGCCTTCAACGGAGAACGCTGTACCCTGGTCTTTGATG
TTTCTCAGCTGATTGGAACGCAGACCATATGTCTGGGAGTTCTTCTTTAC
GGCGGCGTGCGTGGTAAGCATAGCCAATTACCCGGAGAACGAGAATTCTG
TTATCACAATCGATTGAAAGAGGATTCGGGGCTGGAATCGCTGAAGGACT
ATCTGCCCATTATGGTGCTGGTGAAGAGGACAACATTCCTCTGCTGGGCA
CTTGTGGACAGAAAAATGGAATCGCAAGAAGATCTTAATGGTAAACAGTC
AAAAGATCTTAAGCAGGTAAAACATCTAGATTTCTCAAATGATACGCATC
CCAAATGCAGTGAAGAATCGATCAAAAGGTGCGATAGTGGCCAAAAGAAT
AACGATCTAAAGACGACCACTGAAGCCGAGCAGGAAGAGATTATGGACTC
CGATATCTTGATAATTTGGACCCAAAGTGCACCCTGCATCCGACCACTCC
ACGTTGCCATGACCGTATTCAACAGCACCTTGTCGGTTGGCCGGAGCGCC
ATGCGTTGTGTGGCAAATTCGGGCCAAATGTATACCGAAATCGGTGGCAA
GGATCTGCCCAAGGACCGGCATTCCCTTTTGATAACGCAGCAAGAATTGA
AGGAGATATGTGGCGCAGAACATCATCTCCATCTCGAACTGATCCTGCAT
GAGCCTTTGGAATAACCGGCAGCCTGAGATTTTGTTTATTTTTACCTTAT
AATTGCATTTATTAAAGCGGAGTGTGCAGAAAAAAAAAAAAAAAAAAAA

IP09810.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:22:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15472-RA 979 CG15472-RA 1..979 1..979 4895 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:59:09
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 4661872..4662850 979..1 4880 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4769103..4770083 981..1 4905 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:14:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 4777201..4778181 981..1 4905 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:59:08 has no hits.

IP09810.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:59:52 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 4661872..4662850 1..979 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:42:56 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:38:49 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:54:15 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:13:59 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:51:55 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:10:52 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:38:49 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..979 1..979 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:15 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 55..1033 1..979 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:14:00 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 1..906 10..915 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:51:55 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
CG15472-RA 55..1033 1..979 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:52 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
X 4769105..4770083 1..979 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:52 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
X 4769105..4770083 1..979 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:52 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
X 4769105..4770083 1..979 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:15 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4663138..4664116 1..979 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:01:41 Download gff for IP09810.complete
Subject Subject Range Query Range Percent Splice Strand
X 4777203..4778181 1..979 100   Minus

IP09810.hyp Sequence

Translation from 0 to 914

> IP09810.hyp
SRNMDRNKPLRLIGLSSTEPEKQTKLTLNHLCQLPAQCPIEKCISTVFKD
DMLQHLAQRHFRSNVKKHLQVAFNGERCTLVFDVSQLIGTQTICLGVLLY
GGVRGKHSQLPGEREFCYHNRLKEDSGLESLKDYLPIMVLVKRTTFLCWA
LVDRKMESQEDLNGKQSKDLKQVKHLDFSNDTHPKCSEESIKRCDSGQKN
NDLKTTTEAEQEEIMDSDILIIWTQSAPCIRPLHVAMTVFNSTLSVGRSA
MRCVANSGQMYTEIGGKDLPKDRHSLLITQQELKEICGAEHHLHLELILH
EPLE*

IP09810.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15472-PA 301 CG15472-PA 1..301 4..304 1588 100 Plus

IP09810.pep Sequence

Translation from 9 to 914

> IP09810.pep
MDRNKPLRLIGLSSTEPEKQTKLTLNHLCQLPAQCPIEKCISTVFKDDML
QHLAQRHFRSNVKKHLQVAFNGERCTLVFDVSQLIGTQTICLGVLLYGGV
RGKHSQLPGEREFCYHNRLKEDSGLESLKDYLPIMVLVKRTTFLCWALVD
RKMESQEDLNGKQSKDLKQVKHLDFSNDTHPKCSEESIKRCDSGQKNNDL
KTTTEAEQEEIMDSDILIIWTQSAPCIRPLHVAMTVFNSTLSVGRSAMRC
VANSGQMYTEIGGKDLPKDRHSLLITQQELKEICGAEHHLHLELILHEPL
E*

IP09810.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:27:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20345-PA 274 GF20345-PA 20..266 22..298 417 37.1 Plus
Dana\GF20347-PA 819 GF20347-PA 44..180 16..155 157 28.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18518-PA 308 GG18518-PA 1..308 1..301 902 57.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17077-PA 303 GH17077-PA 15..150 18..156 151 28.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15472-PA 301 CG15472-PA 1..301 1..301 1588 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12668-PA 226 GM12668-PA 1..226 49..301 883 68.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16276-PA 140 GD16276-PA 1..140 135..301 516 62.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25313-PA 363 GK25313-PA 53..187 19..156 177 32.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:27:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16835-PA 310 GE16835-PA 1..310 1..301 914 58.1 Plus