Clone IP09837 Report

Search the DGRC for IP09837

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:98
Well:37
Vector:pOT2
Associated Gene/TranscriptCG42319-RF
Protein status:IP09837.pep: gold
Preliminary Size:882
Sequenced Size:2047

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17042 2005-01-01 Successful iPCR screen
CG17042 2008-04-29 Release 5.5 accounting
CG42319 2008-08-15 Release 5.9 accounting
CG42319 2008-12-18 5.12 accounting

Clone Sequence Records

IP09837.complete Sequence

2047 bp (2047 high quality bases) assembled on 2006-09-22

GenBank Submission: BT029078

> IP09837.complete
TTTTTGCTGCTCTTTCATCTGCTGAAAGTGAAAGGAGCTGCCACGATTTC
GCTTTCACTTACGTTTTCGGTTACCCCCAACGGCCTGGCCGACAAAGCGG
GCATTCGCCTGGGCGACATCATACTCGAGATCAACGAGGAGGACGCCTCG
CAGCTGACGCTGTCCCAGGCCCACGAGAAAATCAACTCGACACCCAAGAA
GATACATTTCCTGCTGCGCAACATGGAGGAGGACGATCCCATGGGCCAGT
TTGAGGCTGGGGAGGAGAAGTCGATTGTGATGCGGGTTCCAAAGCCTTTG
CCGCCGCCCAGTGGACGCATTCGAGCCAGCTCCATCGAGATGCGTCTGCT
GGAGATGCAGCGAAAGTTGTCAGCCATTGCCGAAATACCGAAAATCCTGT
GCTCCACTTTGGCCACCGTGTCGCAGAATTTTGGCCGAATGAGTGAATCG
GAGGTGGATGAGGATGACGTCGGGGAGGAGGAGGCCTATGTGCAGCGGAA
GTTCTCCTACGACGAGGATGCCCTTGACTTTGAGCTGAGGAACGGGGAAC
AGGCAGGTGACACTGACAGTGATGAGGAAGATTTGGTGTTGGTTCGGGAG
GAGGATGCTGAGGACGTGGATGTACCGAAAGGTGCCAAGCAATCAAAGCT
GCTGAAGGATGTCACGCCGGAATCGGATTATGCATCGGAAGCCAATTATC
CGGCAAATGAGGCGAGCGATGACACGGAATCCGACGATGAGGATGAGCCG
GGCAGCACGGTATATTTCATGAAACTGCCAGCGGCCGCCGCCGAGGATAC
GTATTCTTCTACGGAGGACGAGGATGACAGCGATTTCCTGAACACCACCT
ACACGTGGAATCTCCGCAATGTGCCCAAGCTGCGAATTAACGATGCCGAG
GCCGAAGGTGAACTGACACTGGGACATCAGGCGCGGGAGGTGCCTCAGCA
GGAGCAGCCACAGGAGAAGCAGCCTTGTCTGGAACCGGAGCCACCGAAGG
TGCGCCCAGCCACGCCCACACCGAAGGCTCCACCTCAAGAATCCGCCGAG
GGGCAGACACAAAAGTTGCTATTCAGACTGGATAAACTGGAACGATCCTG
GCCCTGGGCAGACCGCGAGAAGATCATATACAAGCAATCCACTTGCCATT
TGGTGCCACGAAAGCCACTGGGATTGGTGGGACAGCGAATGCAGCTGCTG
CTGAAGGACAAAAAGGAGTGAGTTCGTGAAGGGAGCAAGGAGTCAAACCC
ATGTTAAACAGTTCCTGCCATTAGTCTAAGTTTAACCTCAGAGGGGGACA
GCTGGGCGTCGAAGGGTGGTGTGAAGTGGCCAACTTTTAATTGAGTTCAT
TATGCAAATACACAGGCGACAACAGCAGCCTCAACTTCAGCAGCACTTCA
ATTAAAAGCCGCACACCCAGGCATATTCGAAACTCTATTCAAACACGCTT
CACACCCAGCCTTTCAGTCGGGTAAAATTTTTAATTAAAGTGCACTCTGC
CGTATGCCAAAAAAATCACTGCCAAGTCAAACGCAACCAGACTGAAAATC
AAGACAAAACCACAGCCAAATCCAAACCCAAACGAGACCAGAGCCAAGCT
CTTCAACCGGCACTTGCAACTTGGCCAGGTTTATGCATTATTTGTGACCC
ACCGCACCATAAATTCCATCTGAAGGCCAACGCAATGCACTTATTCCTCC
AACAGCAGGACCTACGAGTCACGCAGGATGCGGAGAAGGTCGATGACGGT
GCCAAAAAATGTTCCTCGGAGTTTACACTTATTTTTAGAACTCTTGCACA
CGGTTGTATCATTTCAAGAATAGCTAAGATCCCCTTTTATTATATATGGT
ATCTGAATTGTATTTGAATTTAAATTGTATTAATATTATAAATGTGGTTA
ACAATTTAGGCGCAAAATTCATTTTTTTATAAATTTAATAATTTTTGAAA
ATTTTAAACATAAGTCATTGTTCAAATATTTCTCCAAATTTAATAAAGAA
TAACATCACATTTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP09837.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:14:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG42319-RF 2019 CG42319-RF 1..2019 1..2019 10080 99.9 Plus
CG42319-RE 2673 CG42319-RE 723..2673 69..2019 9740 99.9 Plus
CG42319.a 1831 CG42319.a 1221..1831 313..923 3055 100 Plus
CG42319.a 1831 CG42319.a 234..478 69..313 1225 100 Plus
CG42319.a 1831 CG42319.a 106..176 1..71 355 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9152813..9153696 1134..2017 4390 99.8 Plus
chr2R 21145070 chr2R 9151729..9152481 313..1065 3690 99.3 Plus
chr2R 21145070 chr2R 9150002..9150154 69..221 765 100 Plus
chr2R 21145070 chr2R 9150261..9150358 217..314 475 99 Plus
chr2R 21145070 chr2R 9149874..9149944 1..71 355 100 Plus
chr2R 21145070 chr2R 9152679..9152749 1064..1134 355 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13265453..13266338 1134..2019 4415 99.9 Plus
2R 25286936 2R 13264369..13265121 313..1065 3765 100 Plus
2R 25286936 2R 13262642..13262794 69..221 765 100 Plus
2R 25286936 2R 13262901..13262998 217..314 475 99 Plus
2R 25286936 2R 13262514..13262584 1..71 355 100 Plus
2R 25286936 2R 13265319..13265389 1064..1134 355 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13266652..13267537 1134..2019 4415 99.8 Plus
2R 25260384 2R 13265568..13266320 313..1065 3765 100 Plus
2R 25260384 2R 13263841..13263993 69..221 765 100 Plus
2R 25260384 2R 13264100..13264197 217..314 475 98.9 Plus
2R 25260384 2R 13266518..13266588 1064..1134 355 100 Plus
2R 25260384 2R 13263713..13263783 1..71 355 100 Plus
Blast to na_te.dros performed 2019-03-15 15:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 67..172 1943..1832 115 62.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6790..6837 1366..1413 114 70.8 Plus

IP09837.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:54:23 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9149874..9149942 1..69 100 -> Plus
chr2R 9150003..9150154 70..221 100 -> Plus
chr2R 9150266..9150357 222..313 100 -> Plus
chr2R 9151730..9152481 314..1065 99 -> Plus
chr2R 9152681..9152748 1066..1133 100 -> Plus
chr2R 9152813..9153696 1134..2017 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:43:18 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RE 202..1359 65..1221 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:25:24 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RE 202..1359 65..1221 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:44:36 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RE 202..1359 65..1221 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:44:48 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RE 202..1359 65..1221 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:19:44 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RE 202..1359 65..1221 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:53:24 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RF 1..2017 1..2017 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:25:23 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RF 1..2017 1..2017 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:36 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RF 30..2046 1..2017 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:44:49 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RF 1..2017 1..2017 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:19:44 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
CG42319-RF 30..2046 1..2017 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:23 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13262514..13262582 1..69 100 -> Plus
2R 13262643..13262794 70..221 100 -> Plus
2R 13262906..13262997 222..313 100 -> Plus
2R 13264370..13265121 314..1065 100 -> Plus
2R 13265321..13265388 1066..1133 100 -> Plus
2R 13265453..13266336 1134..2017 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:23 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13262514..13262582 1..69 100 -> Plus
2R 13262643..13262794 70..221 100 -> Plus
2R 13262906..13262997 222..313 100 -> Plus
2R 13264370..13265121 314..1065 100 -> Plus
2R 13265321..13265388 1066..1133 100 -> Plus
2R 13265453..13266336 1134..2017 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:54:23 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13262514..13262582 1..69 100 -> Plus
2R 13262643..13262794 70..221 100 -> Plus
2R 13262906..13262997 222..313 100 -> Plus
2R 13264370..13265121 314..1065 100 -> Plus
2R 13265321..13265388 1066..1133 100 -> Plus
2R 13265453..13266336 1134..2017 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:36 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9150019..9150087 1..69 100 -> Plus
arm_2R 9150148..9150299 70..221 100 -> Plus
arm_2R 9150411..9150502 222..313 100 -> Plus
arm_2R 9151875..9152626 314..1065 100 -> Plus
arm_2R 9152826..9152893 1066..1133 100 -> Plus
arm_2R 9152958..9153841 1134..2017 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:52:35 Download gff for IP09837.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13263713..13263781 1..69 100 -> Plus
2R 13263842..13263993 70..221 100 -> Plus
2R 13264105..13264196 222..313 100 -> Plus
2R 13265569..13266320 314..1065 100 -> Plus
2R 13266520..13266587 1066..1133 100 -> Plus
2R 13266652..13267535 1134..2017 99   Plus

IP09837.hyp Sequence

Translation from 0 to 1220

> IP09837.hyp
FLLLFHLLKVKGAATISLSLTFSVTPNGLADKAGIRLGDIILEINEEDAS
QLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSIVMRVPKPL
PPPSGRIRASSIEMRLLEMQRKLSAIAEIPKILCSTLATVSQNFGRMSES
EVDEDDVGEEEAYVQRKFSYDEDALDFELRNGEQAGDTDSDEEDLVLVRE
EDAEDVDVPKGAKQSKLLKDVTPESDYASEANYPANEASDDTESDDEDEP
GSTVYFMKLPAAAAEDTYSSTEDEDDSDFLNTTYTWNLRNVPKLRINDAE
AEGELTLGHQAREVPQQEQPQEKQPCLEPEPPKVRPATPTPKAPPQESAE
GQTQKLLFRLDKLERSWPWADREKIIYKQSTCHLVPRKPLGLVGQRMQLL
LKDKKE*

IP09837.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG42319-PE 452 CG17042-PA 55..452 10..406 1992 97.5 Plus
CG42319-PF 332 CG42319-PF 1..332 75..406 1723 100 Plus
CG42319-PD 251 CG17041-PD 55..150 10..104 429 89.6 Plus
CG42319-PC 131 CG17041-PC 1..30 75..104 160 100 Plus
CG42319-PB 131 CG17041-PB 1..30 75..104 160 100 Plus

IP09837.pep Sequence

Translation from 222 to 1220

> IP09837.pep
MEEDDPMGQFEAGEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQRKLS
AIAEIPKILCSTLATVSQNFGRMSESEVDEDDVGEEEAYVQRKFSYDEDA
LDFELRNGEQAGDTDSDEEDLVLVREEDAEDVDVPKGAKQSKLLKDVTPE
SDYASEANYPANEASDDTESDDEDEPGSTVYFMKLPAAAAEDTYSSTEDE
DDSDFLNTTYTWNLRNVPKLRINDAEAEGELTLGHQAREVPQQEQPQEKQ
PCLEPEPPKVRPATPTPKAPPQESAEGQTQKLLFRLDKLERSWPWADREK
IIYKQSTCHLVPRKPLGLVGQRMQLLLKDKKE*

IP09837.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:27:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13687-PA 305 GF13687-PA 1..305 40..332 909 68.4 Plus
Dana\GF13686-PA 251 GF13686-PA 121..150 1..30 152 96.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20374-PA 287 GG20374-PA 1..287 40..332 1280 93.2 Plus
Dere\GG20373-PA 251 GG20373-PA 121..150 1..30 158 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21624-PA 306 GH21624-PA 1..296 40..328 616 49.1 Plus
Dgri\GH21623-PA 252 GH21623-PA 121..149 1..29 146 93.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG42319-PF 332 CG42319-PF 1..332 1..332 1723 100 Plus
CG42319-PE 452 CG17042-PA 121..452 1..332 1723 100 Plus
CG42319-PC 131 CG17041-PC 1..30 1..30 160 100 Plus
CG42319-PB 131 CG17041-PB 1..30 1..30 160 100 Plus
CG42319-PA 131 CG17041-PA 1..30 1..30 160 100 Plus
CG42319-PD 251 CG17041-PD 121..150 1..30 160 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20078-PA 310 GI20078-PA 1..300 45..328 545 45.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:27:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11006-PA 298 GL11006-PA 1..298 40..332 871 66.3 Plus
Dper\GL11005-PA 131 GL11005-PA 1..30 1..30 146 93.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:27:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14290-PA 298 GA14290-PA 1..298 40..332 866 65.7 Plus
Dpse\GA14289-PA 131 GA14289-PA 1..30 1..30 146 93.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21462-PA 292 GM21462-PA 1..292 40..332 1493 98.3 Plus
Dsec\GM21461-PA 251 GM21461-PA 121..150 1..30 158 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10960-PA 292 GD10960-PA 1..292 40..332 1504 99 Plus
Dsim\GD10959-PA 251 GD10959-PA 121..150 1..30 158 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21171-PA 324 GJ21171-PA 1..314 45..328 597 47.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17981-PA 309 GK17981-PA 2..308 35..332 680 54.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12536-PA 297 GE12536-PA 1..297 40..332 1239 90.9 Plus
Dyak\GE12535-PA 251 GE12535-PA 121..150 1..30 158 100 Plus