IP09861.complete Sequence
839 bp (839 high quality bases) assembled on 2005-03-06
GenBank Submission: BT023218.1
> IP09861.complete
CTGCCACACTGATTTCGTTCTATCCTAAACTTAAGAAGCCATGTTTCCTG
TTGCACGAATCTTAGGCTCGGCATCGTGCAACAGGCTATTTCAACCTCAG
GTGCTATGTCAAGAAAGAGTTTGTTGGCCTTCCAATGAGTTGCACAGAAA
TTTACCAAGGCATAGAAACTTTTACCACGGTAGAAACATTTTCCACCCAA
GGTCGAATAATAATTTAAACGAATTTCCTGCTAAACGTCAATTCACTGAC
AAATTTTCCGAGAAGGGCAGAGGCGAGGAACTTAACTATGTTCTCAAACT
TGCCTCAGAGCAATTTATGAAGATAAAAAAGAACAGGGTTAAAGAAATCG
CCAATGATATCGTCAAATTGAAAGAGGAGATCAAGATTTTGGAATCCAAA
ACTAGCCACAAATCAAGGAAACACAAGGAGAATCTGCTAAAGGAATTGAA
AGCTCTGAAGGATTTGTTGGAGCAATTCAAAAAGAGTCTCGAAAAATGAC
CTATCAAACGGATACAATGCTGAAGTTGGTCGAAAAGCTTTTCCAACTGT
TGCGACCCAGGATGTGTCAGTTTTCACAATCCAACAAGAACATATCCAAG
CATTTGTTCGAAAAAGCCAGGGCGGAGGAGAACATACATTTCCTTAAACT
GCAACGGGAACAGCTGAAGTCGTTGCGAGAAAAGATTCTCAGCCAGAAGA
ACGAAGTCACAACAAAGATCATCAAGGTGGATAAGCAGATACAATCGTTG
GAAAAAACCAAGACCGAAGGCTCACAGATGAACCATGAACAAAATTAATA
AAGTGTAGCTGAAACATTAAAAAAAAAAAAAAAAAAAAA
IP09861.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:47:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42560-RA | 878 | CG42560-RA | 61..878 | 1..818 | 4090 | 100 | Plus |
CG42559-RC | 940 | CG42559-RC | 61..711 | 1..651 | 3255 | 100 | Plus |
CG42559-RB | 937 | CG42559-RB | 61..648 | 1..588 | 2940 | 100 | Plus |
CG42559-RB | 937 | CG42559-RB | 707..937 | 588..818 | 1155 | 100 | Plus |
CG42559-RC | 940 | CG42559-RC | 773..940 | 651..818 | 840 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:24:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19486302..19486502 | 502..302 | 975 | 99 | Minus |
chr2R | 21145070 | chr2R | 19485764..19485931 | 818..651 | 825 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 19486852..19486974 | 123..1 | 615 | 100 | Minus |
chr2R | 21145070 | chr2R | 19486686..19486797 | 234..123 | 560 | 100 | Minus |
chr2R | 21145070 | chr2R | 19486115..19486193 | 588..510 | 395 | 100 | Minus |
chr2R | 21145070 | chr2R | 19486560..19486627 | 302..235 | 340 | 100 | Minus |
chr2R | 21145070 | chr2R | 19485993..19486056 | 651..588 | 305 | 98.4 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:59:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:24:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23600046..23600255 | 511..302 | 1050 | 100 | Minus |
2R | 25286936 | 2R | 23599528..23599695 | 818..651 | 840 | 100 | Minus |
2R | 25286936 | 2R | 23600605..23600727 | 123..1 | 615 | 100 | Minus |
2R | 25286936 | 2R | 23600439..23600550 | 234..123 | 560 | 100 | Minus |
2R | 25286936 | 2R | 23599879..23599957 | 588..510 | 395 | 100 | Minus |
2R | 25286936 | 2R | 23600313..23600380 | 302..235 | 340 | 100 | Minus |
2R | 25286936 | 2R | 23599757..23599820 | 651..588 | 320 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:37:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 23601245..23601454 | 511..302 | 1050 | 100 | Minus |
2R | 25260384 | 2R | 23600727..23600894 | 818..651 | 840 | 100 | Minus |
2R | 25260384 | 2R | 23601804..23601926 | 123..1 | 615 | 100 | Minus |
2R | 25260384 | 2R | 23601638..23601749 | 234..123 | 560 | 100 | Minus |
2R | 25260384 | 2R | 23601078..23601156 | 588..510 | 395 | 100 | Minus |
2R | 25260384 | 2R | 23601512..23601579 | 302..235 | 340 | 100 | Minus |
2R | 25260384 | 2R | 23600956..23601019 | 651..588 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 13:24:46 has no hits.
IP09861.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:25:53 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19486686..19486796 | 124..234 | 100 | <- | Minus |
chr2R | 19486852..19486974 | 1..123 | 100 | | Minus |
chr2R | 19485764..19485930 | 652..818 | 99 | <- | Minus |
chr2R | 19485993..19486056 | 588..651 | 98 | <- | Minus |
chr2R | 19486116..19486192 | 511..587 | 100 | <- | Minus |
chr2R | 19486292..19486502 | 302..510 | 97 | <- | Minus |
chr2R | 19486561..19486627 | 235..301 | 100 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:43:25 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30182-RA | 1..750 | 41..798 | 96 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:17:38 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RC | 1..459 | 41..499 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:13:54 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 1..459 | 41..499 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:01:56 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30182-RA | 1..750 | 41..798 | 96 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:13:09 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 1..459 | 41..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:17:14 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30182-RA | 28..837 | 1..818 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:17:38 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42560-RA | 61..878 | 1..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:13:54 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 61..878 | 1..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:01:57 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30182-RA | 28..837 | 1..818 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:09 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 61..878 | 1..818 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:25:53 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600047..23600255 | 302..510 | 100 | <- | Minus |
2R | 23600314..23600380 | 235..301 | 100 | <- | Minus |
2R | 23600439..23600549 | 124..234 | 100 | <- | Minus |
2R | 23600605..23600727 | 1..123 | 100 | | Minus |
2R | 23599880..23599956 | 511..587 | 100 | <- | Minus |
2R | 23599528..23599694 | 652..818 | 100 | <- | Minus |
2R | 23599757..23599820 | 588..651 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:25:53 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600047..23600255 | 302..510 | 100 | <- | Minus |
2R | 23600314..23600380 | 235..301 | 100 | <- | Minus |
2R | 23600439..23600549 | 124..234 | 100 | <- | Minus |
2R | 23600605..23600727 | 1..123 | 100 | | Minus |
2R | 23599880..23599956 | 511..587 | 100 | <- | Minus |
2R | 23599528..23599694 | 652..818 | 100 | <- | Minus |
2R | 23599757..23599820 | 588..651 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:25:53 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23600047..23600255 | 302..510 | 100 | <- | Minus |
2R | 23600314..23600380 | 235..301 | 100 | <- | Minus |
2R | 23600439..23600549 | 124..234 | 100 | <- | Minus |
2R | 23600605..23600727 | 1..123 | 100 | | Minus |
2R | 23599880..23599956 | 511..587 | 100 | <- | Minus |
2R | 23599528..23599694 | 652..818 | 100 | <- | Minus |
2R | 23599757..23599820 | 588..651 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:13:54 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19487051..19487217 | 652..818 | 100 | <- | Minus |
arm_2R | 19487280..19487343 | 588..651 | 100 | <- | Minus |
arm_2R | 19487403..19487479 | 511..587 | 100 | <- | Minus |
arm_2R | 19487570..19487778 | 302..510 | 100 | <- | Minus |
arm_2R | 19487837..19487903 | 235..301 | 100 | <- | Minus |
arm_2R | 19487962..19488072 | 124..234 | 100 | <- | Minus |
arm_2R | 19488128..19488250 | 1..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:37:44 Download gff for
IP09861.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23601264..23601472 | 302..510 | 100 | <- | Minus |
2R | 23601531..23601597 | 235..301 | 100 | <- | Minus |
2R | 23601656..23601766 | 124..234 | 100 | <- | Minus |
2R | 23601822..23601944 | 1..123 | 100 | | Minus |
2R | 23600745..23600911 | 652..818 | 100 | <- | Minus |
2R | 23600974..23601037 | 588..651 | 100 | <- | Minus |
2R | 23601097..23601173 | 511..587 | 100 | <- | Minus |
IP09861.hyp Sequence
Translation from 40 to 498
> IP09861.hyp
MFPVARILGSASCNRLFQPQVLCQERVCWPSNELHRNLPRHRNFYHGRNI
FHPRSNNNLNEFPAKRQFTDKFSEKGRGEELNYVLKLASEQFMKIKKNRV
KEIANDIVKLKEEIKILESKTSHKSRKHKENLLKELKALKDLLEQFKKSL
EK*
IP09861.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:37:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42559-PC | 152 | CG42559-PC | 1..152 | 1..152 | 794 | 100 | Plus |
CG42559-PB | 152 | CG42559-PB | 1..152 | 1..152 | 794 | 100 | Plus |
CG42559-PA | 152 | CG42559-PA | 1..152 | 1..152 | 794 | 100 | Plus |
IP09861.pep Sequence
Translation from 495 to 797
> IP09861.pep
MTYQTDTMLKLVEKLFQLLRPRMCQFSQSNKNISKHLFEKARAEENIHFL
KLQREQLKSLREKILSQKNEVTTKIIKVDKQIQSLEKTKTEGSQMNHEQN
*
IP09861.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:08:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF11834-PA | 179 | GF11834-PA | 92..172 | 8..88 | 256 | 60.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:08:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20017-PA | 85 | GG20017-PA | 1..85 | 8..92 | 373 | 87.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42560-PB | 93 | CG42560-PB | 1..93 | 8..100 | 462 | 100 | Plus |
CG42560-PA | 93 | CG42560-PA | 1..93 | 8..100 | 462 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:08:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI19034-PA | 97 | GI19034-PA | 33..91 | 33..91 | 135 | 47.5 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL17600-PA | 89 | GL17600-PA | 1..87 | 8..94 | 192 | 49.4 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA30494-PA | 89 | GA30494-PA | 1..87 | 8..94 | 199 | 49.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:08:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15528-PA | 254 | GM15528-PA | 160..254 | 6..100 | 456 | 94.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:08:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25032-PA | 254 | GD25032-PA | 160..254 | 6..100 | 468 | 96.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:08:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11553-PA | 93 | GE11553-PA | 1..93 | 8..100 | 421 | 88.2 | Plus |