Clone IP09930 Report

Search the DGRC for IP09930

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:99
Well:30
Vector:pOT2
Associated Gene/TranscriptCG16815-RB
Protein status:IP09930.pep: gold
Preliminary Size:768
Sequenced Size:1267

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16815 2008-04-29 Release 5.5 accounting
CG16815 2008-08-15 Release 5.9 accounting
CG16815 2008-12-18 5.12 accounting

Clone Sequence Records

IP09930.complete Sequence

1267 bp (1267 high quality bases) assembled on 2006-04-05

GenBank Submission: BT025114

> IP09930.complete
ACGACAATTAGCGCTGTGATAGAGCAGGTCATAAAATATGCTGCTTAATC
CAGGACGGAGATTACCTAATGCGGAATGGATGCGCTAATCCCTTTGTTGA
CAGACCCAAAACAAAGGGATTTCCCTATGTGGCTACCTGTACCGCCTACC
TACTGTGCTTATAACCAGGATATCAATCTCGAAGCCAATCATTCAGCAAG
CGATCGTCCAACGAGTCACATCATCACCACAACTCATTCGGAGTCATATT
ATCGAAATACAAAAATGGAGAACTCATCGAGCTACACCCACAAGAAGTTT
GCCGTCAGCAAGCGGAAACGGGAAGTGGACCATGACAAGGAGAACCAAAC
TCAGCAGTCGGAACAGCCGATCTTCAAGCGCCGTCAGACACAGGGATTCT
TCCGACCTTGGTTGGATAATGAGCAGAACCAACAGGCGGAGAAGGAGACG
TCAACGGCGGCGAAACCCAGTGGCCCAGGATCCTCGGTCAGCCAGTACCG
TGCCAACATGGTGCGCCGCAGTAACACCAATCGCCAGCGTAGCCCCAAGG
AGCAGATGCGCCGCGATAGAAACACGCTGGCTTGCCTACTCAGCCGGCGG
GCCAAGCAAGCACAGGAGGAGCAAGTGGGTCAGCAGTACGAGCAGTATCG
GAGTCATCATGCCGCCATGCTGGAACAGCAGGTGCGCCTTAGTCTATACT
ACCGCCACATCCTACAACAGGCGGTGTTCCAGCGTGCCATAAATCCGGCA
CCGGGTCACATCCTGCCGCAGCAGCAACAACAGTTCCTCCAGCAGATGGC
CCTCTCCCAGCAGATGCTCATCTTTGGTGGCCAGCACTGCTGACCGTCCA
AAATCATATCATAATCAGCGACTATGGATAGCCCAATCATGTGATTTAGT
TTATTAAGCCTTAATCATTAATATTTATTGTTGACTTTGAAATAAATCAA
AAATTATGCATTTAATTTAAATTGCCGGTTTTGTTAACTGGGGGTTATCA
CTTGGAAAATTCGAAATTTAATCTAAAATGATTGTTAAATTTGTTAGGAG
GTCAGTGGATCGCAACCATTACATTTTTTTGGTGTGTGGATTACCTGGAT
TATCGGACAAATGTGGCCACCGGAACAGGAAAGTTCTGGACCGAACAACT
GTTATGCAGGCGATGCATTTTTTTATTGACCTGCATGACACAATTTGTTG
TGGCACCGTGTGTGGTCCCTTTGGCTCCTGGTTCCTCAGCACACTTTGTT
TTAATTCCCTGGAAATT

IP09930.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:33:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG16815-RB 1079 CG16815-RB 1..1079 1..1079 5290 99.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13228313..13229392 1..1080 5280 99.3 Plus
chr2L 23010047 chr2L 13228098..13228291 1267..1074 970 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:00:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13229642..13230721 1..1080 5295 99.4 Plus
2L 23513712 2L 13229427..13229620 1267..1074 970 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13229642..13230721 1..1080 5295 99.3 Plus
2L 23513712 2L 13229427..13229620 1267..1074 970 100 Minus
Blast to na_te.dros performed 2019-03-16 02:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6845..6877 763..795 111 81.8 Plus

IP09930.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:31:06 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13228313..13229390 1..1078 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:44:03 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..579 265..843 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:56:55 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..579 265..843 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:20:44 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..579 265..843 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:37:46 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..579 265..843 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:13:27 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..579 265..843 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:35:44 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..1079 1..1079 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:56:55 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..1079 1..1079 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:20:44 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..781 191..971 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:37:46 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..1079 1..1079 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:13:27 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
CG16815-RB 1..718 191..908 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:31:06 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13229642..13230719 1..1078 99 <- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:31:06 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13229642..13230719 1..1078 99 <- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:31:06 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13229642..13230719 1..1078 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:20:44 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13229642..13230719 1..1078 99 <- Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:16:19 Download gff for IP09930.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13229642..13230719 1..1078 99 <- Plus

IP09930.pep Sequence

Translation from 75 to 842

> IP09930.pep
MDALIPLLTDPKQRDFPMWLPVPPTYCAYNQDINLEANHSASDRPTSHII
TTTHSESYYRNTKMENSSSYTHKKFAVSKRKREVDHDKENQTQQSEQPIF
KRRQTQGFFRPWLDNEQNQQAEKETSTAAKPSGPGSSVSQYRANMVRRSN
TNRQRSPKEQMRRDRNTLACLLSRRAKQAQEEQVGQQYEQYRSHHAAMLE
QQVRLSLYYRHILQQAVFQRAINPAPGHILPQQQQQFLQQMALSQQMLIF
GGQHC*

IP09930.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23086-PA 199 GF23086-PA 1..198 64..253 599 75.3 Plus
Dana\GF23075-PA 188 GF23075-PA 1..172 64..228 247 43.6 Plus
Dana\GF21687-PA 215 GF21687-PA 96..171 138..214 158 42.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23826-PA 192 GG23826-PA 1..192 64..255 909 94.8 Plus
Dere\GG16673-PA 54 GG16673-PA 1..53 1..53 275 92.5 Plus
Dere\GG23825-PA 184 GG23825-PA 3..178 69..234 251 44.8 Plus
Dere\GG10217-PA 208 GG10217-PA 1..170 64..214 145 28.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:41:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25090-PA 200 GH25090-PA 6..199 64..253 491 60.9 Plus
Dgri\GH22261-PA 200 GH22261-PA 6..199 64..253 491 60.9 Plus
Dgri\GH25089-PA 194 GH25089-PA 13..164 70..217 301 46.5 Plus
Dgri\GH22260-PA 194 GH22260-PA 13..164 70..217 301 46.5 Plus
Dgri\GH25114-PA 214 GH25114-PA 103..198 138..233 169 34 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG16815-PB 192 CG16815-PB 1..192 64..255 996 100 Plus
CG16813-PB 184 CG16813-PB 3..178 69..234 320 44.5 Plus
CG16813-PA 184 CG16813-PA 3..178 69..234 320 44.5 Plus
Mabi-PA 206 CG15479-PA 1..168 64..214 175 29 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17611-PA 198 GI17611-PA 4..197 66..253 539 64 Plus
Dmoj\GI17610-PA 190 GI17610-PA 1..171 64..239 286 48.4 Plus
Dmoj\GI10694-PA 211 GI10694-PA 99..211 138..255 159 33.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26309-PA 177 GL26309-PA 4..177 72..254 327 46.5 Plus
Dper\GL26308-PA 193 GL26308-PA 1..163 64..217 282 49.4 Plus
Dper\GL26179-PA 150 GL26179-PA 1..149 64..253 196 37.3 Plus
Dper\GL26695-PA 236 GL26695-PA 108..189 138..221 165 41.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28811-PA 184 GA28811-PA 1..184 64..254 362 49.7 Plus
Dpse\GA14163-PA 193 GA14163-PA 1..163 64..217 282 49.4 Plus
Dpse\GA28059-PA 162 GA28059-PA 1..161 64..253 265 39.4 Plus
Dpse\GA13758-PA 234 GA13758-PA 105..199 137..232 171 40.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10290-PA 192 GM10290-PA 1..192 64..255 909 95.8 Plus
Dsec\GM10279-PA 184 GM10279-PA 2..178 68..234 274 44.3 Plus
Dsec\GM25716-PA 206 GM25716-PA 92..168 137..214 154 39.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23875-PA 192 GD23875-PA 1..192 64..255 908 95.3 Plus
Dsim\GD23874-PA 184 GD23874-PA 2..178 68..234 278 44.8 Plus
Dsim\GD24073-PA 98 GD24073-PA 1..92 145..234 173 51.1 Plus
Dsim\GD22077-PA 206 GD22077-PA 92..168 137..214 154 39.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17956-PA 207 GJ17956-PA 12..207 66..254 520 64.3 Plus
Dvir\GJ17955-PA 182 GJ17955-PA 1..176 64..240 312 45.6 Plus
Dvir\GJ18272-PA 225 GJ18272-PA 114..189 138..214 158 36.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14548-PA 177 GK14548-PA 5..177 84..254 499 65.9 Plus
Dwil\GK14547-PA 180 GK14547-PA 3..154 69..219 254 46.8 Plus
Dwil\GK14550-PA 199 GK14550-PA 84..161 138..216 164 38 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18629-PA 255 GE18629-PA 1..255 1..255 1208 92.5 Plus
Dyak\GE18628-PA 184 GE18628-PA 3..178 69..234 267 44 Plus
Dyak\GE11787-PA 206 GE11787-PA 92..168 137..214 154 39.7 Plus

IP09930.hyp Sequence

Translation from 75 to 842

> IP09930.hyp
MDALIPLLTDPKQRDFPMWLPVPPTYCAYNQDINLEANHSASDRPTSHII
TTTHSESYYRNTKMENSSSYTHKKFAVSKRKREVDHDKENQTQQSEQPIF
KRRQTQGFFRPWLDNEQNQQAEKETSTAAKPSGPGSSVSQYRANMVRRSN
TNRQRSPKEQMRRDRNTLACLLSRRAKQAQEEQVGQQYEQYRSHHAAMLE
QQVRLSLYYRHILQQAVFQRAINPAPGHILPQQQQQFLQQMALSQQMLIF
GGQHC*

IP09930.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG16815-PB 192 CG16815-PB 1..192 64..255 996 100 Plus
CG16813-PB 184 CG16813-PB 3..178 69..234 320 44.5 Plus
CG16813-PA 184 CG16813-PA 3..178 69..234 320 44.5 Plus
CG15479-PA 206 CG15479-PA 1..168 64..214 175 29 Plus