BDGP Sequence Production Resources |
Search the DGRC for IP09950
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 99 |
Well: | 50 |
Vector: | pOT2 |
Associated Gene/Transcript | slx1-RB |
Protein status: | IP09950.pep: gold |
Preliminary Size: | 925 |
Sequenced Size: | 1145 |
Gene | Date | Evidence |
---|---|---|
CG18271 | 2008-04-29 | Release 5.5 accounting |
MED31 | 2008-08-15 | Release 5.9 accounting |
MED31 | 2008-12-18 | 5.12 accounting |
1145 bp (1145 high quality bases) assembled on 2006-09-19
GenBank Submission: BT029079
> IP09950.complete TCGCCGGCCATCAACAATCCAAATGAACTCCTACGACCCACAGGACACAG CTTCTCAACAGGAGGAATCCGTCGCGCTGAAGGGCCACTTCTACGGCGTC TATTTGCTATGCAGTCAGAGCTTGGATCCTCGCTACCGGGGAAAATGCTA CGTGGGCTTCACCGTGAACCCCAAACGGCGGATACGCCAACACAATCTTG GTTGTGATTTCGGTGGCGCGAGGAAAACCAGTCGCAAAGGGCCGTGGCTG ATGGTAATGATCGTGCACGGATTCCCGAATAATACAGTGGCACTCCAGTT TGAATGGGCTTGGCAACAGCCGTCGCTTTCAACTAGGCTTAAAATGTACC CTGAATTAAAACGAAAACTGCCCAGGGAGACGTTCTTTGACTACAACTTT AGGATCCTTAGTAATATGCTGGGGGTTGGCCCTTGGAATAGATTACCGCT CACCGTTCGCTGGCTAGAAACGGATTACGAGAGGCCATTCAGCAAGGCAC TGCCTAAACACATGGAAATTGTGAGTGGCAAGGTTTCCATTAGTGCCTCA CAACGTAGGAGACCTGATGATGCAGTACCTCCTCCACCTGTGGCGTGGGC TTCCGAGTGCCACCTTTGTATGCAGGAAATGGAGCAACCGGAGAAATCCC GCCTGGGATGCACAAATCAAATGTGTCGGCTGACATGCCATATGGTGTGC CTGGCCAATTACCTTCTGGGCGACGAGCCAGGTCATTACATCCCAGTTGG AGGAGAGTGTCCGCTTTGTGAGACTCGTCTCAGCTGGGCAGCACTGCTGC AGCGCAAACGTCTTCTTTTGGGCGTGCCTGAAGAACTGCAGGATCATGAC GAGGATCTGAGCGACGACATTGATGTAGACAGCGATATTGAAGATACCCC GGAGCTCAGCGATTAGTTGAGGACCCATTTCATTTTATTTACAAATGCTA AGGTATCGCATAAGCTAAAAGTATCTAGGCAAACACCATCTTAATGCGCT TGTAAAAGTAAACATTTTAACTAAATACTTTAAAAATATTTCCAATAGAT AATACTGAGTATAATTTAGATTTGTTTGCGGTATTTAAGGTTTAAACGAA AGAAATTAAATGCTGAAATTTAAAGTGTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 469253..470346 | 35..1128 | 5470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4643543..4644642 | 35..1134 | 5485 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G7 | 1192 | G7 G7 1192bp | 1085..1170 | 1094..1010 | 121 | 61.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 467684..467718 | 1..35 | 100 | -> | Plus |
chr3R | 469254..470346 | 36..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18271-RA | 33..924 | 24..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18271-RB | 1..894 | 23..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slx1-RB | 1..894 | 23..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18271-RA | 33..924 | 24..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slx1-RB | 1..894 | 23..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18271-RA | 34..925 | 24..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18271-RB | 1..1128 | 1..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slx1-RB | 12..1139 | 1..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18271-RA | 34..925 | 24..916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
slx1-RB | 12..1139 | 1..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4641974..4642008 | 1..35 | 100 | -> | Plus |
3R | 4643544..4644636 | 36..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4641974..4642008 | 1..35 | 100 | -> | Plus |
3R | 4643544..4644636 | 36..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4641974..4642008 | 1..35 | 100 | -> | Plus |
3R | 4643544..4644636 | 36..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 467696..467730 | 1..35 | 100 | -> | Plus |
arm_3R | 469266..470358 | 36..1128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4382805..4382839 | 1..35 | 100 | -> | Plus |
3R | 4384375..4385467 | 36..1128 | 100 | Plus |
Translation from 0 to 915
> IP09950.hyp RRPSTIQMNSYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCY VGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQF EWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLPL TVRWLETDYERPFSKALPKHMEIVSGKVSISASQRRRPDDAVPPPPVAWA SECHLCMQEMEQPEKSRLGCTNQMCRLTCHMVCLANYLLGDEPGHYIPVG GECPLCETRLSWAALLQRKRLLLGVPEELQDHDEDLSDDIDVDSDIEDTP ELSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slx1-PB | 297 | CG18271-PB | 1..297 | 8..304 | 1626 | 100 | Plus |
Translation from 1 to 915
> IP09950.pep RRPSTIQMNSYDPQDTASQQEESVALKGHFYGVYLLCSQSLDPRYRGKCY VGFTVNPKRRIRQHNLGCDFGGARKTSRKGPWLMVMIVHGFPNNTVALQF EWAWQQPSLSTRLKMYPELKRKLPRETFFDYNFRILSNMLGVGPWNRLPL TVRWLETDYERPFSKALPKHMEIVSGKVSISASQRRRPDDAVPPPPVAWA SECHLCMQEMEQPEKSRLGCTNQMCRLTCHMVCLANYLLGDEPGHYIPVG GECPLCETRLSWAALLQRKRLLLGVPEELQDHDEDLSDDIDVDSDIEDTP ELSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16665-PA | 299 | GF16665-PA | 13..294 | 19..297 | 1246 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12527-PA | 304 | GG12527-PA | 15..304 | 12..300 | 1434 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19497-PA | 286 | GH19497-PA | 9..269 | 22..290 | 946 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
slx1-PB | 297 | CG18271-PB | 1..297 | 8..304 | 1626 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23768-PA | 303 | GI23768-PA | 7..303 | 16..304 | 1017 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22073-PA | 291 | GL22073-PA | 6..291 | 20..304 | 1202 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27368-PA | 291 | GA27368-PA | 6..291 | 20..304 | 1188 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10768-PA | 308 | GM10768-PA | 15..287 | 12..284 | 1375 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17776-PA | 183 | GD17776-PA | 15..178 | 12..175 | 869 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23950-PA | 303 | GJ23950-PA | 1..261 | 18..278 | 1078 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19194-PA | 225 | GK19194-PA | 1..219 | 84..297 | 801 | 70.3 | Plus |