Clone IP09970 Report

Search the DGRC for IP09970

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:99
Well:70
Vector:pOT2
Associated Gene/TranscriptCG30495-RA
Protein status:IP09970.pep: gold
Preliminary Size:898
Sequenced Size:1348

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30495 2008-04-29 Release 5.5 accounting
CG30495 2008-08-15 Release 5.9 accounting
CG30495 2008-12-18 5.12 accounting

Clone Sequence Records

IP09970.complete Sequence

1348 bp (1348 high quality bases) assembled on 2005-06-08

GenBank Submission: BT023521

> IP09970.complete
CGGACCGCTTAGCCAGTATGGAAATTGTTATAAGGTTTCTGCAAAGCATA
GCACCCGTCTTCTTGGCCCATGGGATTGTCGGCATTATCGCCTTCTGCGT
GAGGCTGTATATGCAGGGCGGAAAGTTTAGGAAGCAGACCGATGAGACGG
GAAAAGTGGCCATCGTTACTGGCGGAAATACGGGTCTTGGCAAGGAGACC
GTGATGGAGTTGGCCAGGAGAGGAGCCACCGTTTACATGGCATGCCGCAA
CAAAGAAAAGGTGGAGAGAGCGCGCAGGGAAATCGTAAAGGAGACCGGAA
ACTCCAATGTCTTCTCACGGGAGTGCGACTTGTCGTCCCTGGATTCCATT
CGAAAGTTTGCAGAGAACTTCAAGAAAGAGCAGAGGGTGCTGCACATCCT
CATCAACAATGCTGGTGTGTTTTGGGAACCGCATAGATTGACGAAAGAGG
GATTCGAAATGCACCTGGGTGTAAACCACATCGGACACTTCCTGCTAACC
AACCTACTGCTCGGCGTGCTGGAGAGGTCGGCTCCTAGTCGGGTGGTGGT
GGTCGCCAGCAGGGCCCACGAACGGGGTCAGATTAAGGTGGATGACATCA
ACAGCTCTGATTTTTACGACGAGGGAGTAGCCTACTGCCAAAGTAAGCTG
GCCAACATACTCTTCACCCGCGAACTGGCCAAGCGGTTGGAGGGAACGGG
CGTGACGGTCAACGCCCTTAATCCTGGAATAGCAGACACGGAGATAGCCA
GGAACATGATCTTCTTCCAAACAAAGTTTGCTCAAACCATTTTGAGGCCG
CTCCTTTGGGCCGTGATGAAGACGCCTAAGAACGGGGCCCAGACCACCTT
GTATGCTGCCTTGGATCCTGATCTCGAAAGAGTGTCGGGTCAGTACTTCA
GCGATTGCGCTCTGGCTCCGGTAGCTCCCGCTGCCCTCGACGACCAGATG
GCCCAGTGGTTGTGGGCGCAGTCCGAGAAGTGGGCGAAAATTGCGCTGTA
AATGGGCTACTGGAATAGTGTGATTGGGCTAGTCGCAATTAAAGCCACTT
AAATTTCACAACAGCCGTGGTTATTGAAGTACGCACTCTTAGTATAATAG
GATATACCAGATTCAATGGCCTGTACTAGGTAATAAGAACAATTAAAGGA
TTTGCTAGTCGAGGAACATGATATCCTGATTCATATATCCTACCTGTTAC
GTGGACCTTAACTACAATAATTTAGGTTGATTGTTACTTTACAAGTAAAT
CGTATAGTTAGTTCAGGTAATATGTTAGATAGGAACATGTGTCATATTTA
CTAAATAAAATTTAAACTATATGTAAGCTAAAAAAAAAAAAAAAAAAA

IP09970.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG30495-RA 1674 CG30495-RA 340..1671 1..1332 6660 100 Plus
CG30495.a 1386 CG30495.a 43..826 1..784 3920 100 Plus
CG30495.b 1382 CG30495.b 43..826 1..784 3920 100 Plus
CG30495.a 1386 CG30495.a 838..1386 784..1332 2745 100 Plus
CG30495.b 1382 CG30495.b 834..1381 785..1332 2740 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3545527..3546071 785..1329 2725 100 Plus
chr2R 21145070 chr2R 3545041..3545457 368..784 2085 100 Plus
chr2R 21145070 chr2R 3544717..3544982 102..367 1315 99.6 Plus
chr2R 21145070 chr2R 3544503..3544606 1..104 520 100 Plus
chr2R 21145070 chr2R 3551347..3551483 111..247 250 78.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:00:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7658220..7658772 785..1337 2750 99.8 Plus
2R 25286936 2R 7657734..7658150 368..784 2085 100 Plus
2R 25286936 2R 7657410..7657675 102..367 1330 100 Plus
2R 25286936 2R 7657196..7657299 1..104 520 100 Plus
2R 25286936 2R 7664040..7664176 111..247 250 78.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7659419..7659971 785..1337 2750 99.8 Plus
2R 25260384 2R 7658933..7659349 368..784 2085 100 Plus
2R 25260384 2R 7658609..7658874 102..367 1330 100 Plus
2R 25260384 2R 7658395..7658498 1..104 520 100 Plus
2R 25260384 2R 7665239..7665375 111..247 250 78.8 Plus
2R 25260384 2R 7665894..7665949 645..700 175 87.5 Plus
2R 25260384 2R 7663369..7663502 108..241 175 75.3 Plus
2R 25260384 2R 7667348..7667440 107..199 165 78.4 Plus
2R 25260384 2R 7665623..7665695 439..511 155 80.8 Plus
Blast to na_te.dros performed 2019-03-16 16:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 6012..6080 1211..1280 113 64.3 Plus

IP09970.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:19:19 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3545041..3545457 368..784 100 -> Plus
chr2R 3544503..3544605 1..103 100 -> Plus
chr2R 3544719..3544982 104..367 99 -> Plus
chr2R 3545527..3546071 785..1329 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:44:27 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..984 18..1001 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:00:00 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..984 18..1001 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:07:08 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..984 18..1001 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:40:30 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..984 18..1001 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:24:46 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..984 18..1001 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:42:23 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..1329 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:00:00 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..1329 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:07:08 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 27..1355 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:40:32 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 1..1329 1..1329 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:24:46 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
CG30495-RA 27..1355 1..1329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:19:19 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7657196..7657298 1..103 100 -> Plus
2R 7657412..7657675 104..367 100 -> Plus
2R 7657734..7658150 368..784 100 -> Plus
2R 7658220..7658764 785..1329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:19:19 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7657196..7657298 1..103 100 -> Plus
2R 7657412..7657675 104..367 100 -> Plus
2R 7657734..7658150 368..784 100 -> Plus
2R 7658220..7658764 785..1329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:19:19 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7657196..7657298 1..103 100 -> Plus
2R 7657412..7657675 104..367 100 -> Plus
2R 7657734..7658150 368..784 100 -> Plus
2R 7658220..7658764 785..1329 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:07:08 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3544701..3544803 1..103 100 -> Plus
arm_2R 3544917..3545180 104..367 100 -> Plus
arm_2R 3545239..3545655 368..784 100 -> Plus
arm_2R 3545725..3546269 785..1329 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:19:29 Download gff for IP09970.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7658611..7658874 104..367 100 -> Plus
2R 7658933..7659349 368..784 100 -> Plus
2R 7659419..7659963 785..1329 100   Plus
2R 7658395..7658497 1..103 100 -> Plus

IP09970.pep Sequence

Translation from 2 to 1000

> IP09970.pep
DRLASMEIVIRFLQSIAPVFLAHGIVGIIAFCVRLYMQGGKFRKQTDETG
KVAIVTGGNTGLGKETVMELARRGATVYMACRNKEKVERARREIVKETGN
SNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAGVFWEPHRLTKEG
FEMHLGVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDIN
SSDFYDEGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIAR
NMIFFQTKFAQTILRPLLWAVMKTPKNGAQTTLYAALDPDLERVSGQYFS
DCALAPVAPAALDDQMAQWLWAQSEKWAKIAL*

IP09970.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13189-PA 327 GF13189-PA 1..327 6..332 1465 83.5 Plus
Dana\GF13188-PA 331 GF13188-PA 3..326 9..331 1062 62 Plus
Dana\GF13193-PA 327 GF13193-PA 9..324 16..331 1061 64.2 Plus
Dana\GF13191-PA 300 GF13191-PA 1..294 37..330 981 63.9 Plus
Dana\GF13190-PA 328 GF13190-PA 21..320 28..327 949 62.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:53:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23292-PA 296 GG23292-PA 1..296 37..332 1493 93.6 Plus
Dere\GG23294-PA 329 GG23294-PA 1..320 6..327 1070 63.7 Plus
Dere\GG23291-PA 331 GG23291-PA 6..327 12..332 1014 61.8 Plus
Dere\GG23293-PA 327 GG23293-PA 19..327 22..332 980 62.1 Plus
Dere\GG19587-PA 405 GG19587-PA 50..349 26..326 691 50.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:53:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21882-PA 325 GH21882-PA 9..320 16..327 1089 66.3 Plus
Dgri\GH21880-PA 325 GH21880-PA 20..320 27..327 1064 67.4 Plus
Dgri\GH21876-PA 334 GH21876-PA 3..324 9..329 1005 62.7 Plus
Dgri\GH21883-PA 573 GH21883-PA 272..566 33..327 982 64.1 Plus
Dgri\GH21881-PA 304 GH21881-PA 25..303 52..329 918 64.2 Plus
Dgri\GH21883-PA 573 GH21883-PA 46..273 34..261 782 67.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30495-PA 327 CG30495-PA 1..327 6..332 1677 100 Plus
CG30495-PB 331 CG30495-PB 1..331 6..332 1662 98.8 Plus
CG2064-PA 330 CG2064-PA 9..320 16..327 1093 64.7 Plus
CG30491-PB 331 CG30491-PB 6..324 12..329 1016 62.4 Plus
CG30491-PA 331 CG30491-PA 6..324 12..329 1016 62.4 Plus
CG2065-PB 300 CG2065-PB 1..294 37..330 1001 65.3 Plus
CG2065-PA 300 CG2065-PA 1..294 37..330 1001 65.3 Plus
CG2070-PB 325 CG2070-PB 11..323 18..330 990 61.7 Plus
CG2070-PA 325 CG2070-PA 11..323 18..330 990 61.7 Plus
CG3842-PD 406 CG3842-PD 47..349 25..326 705 51.5 Plus
CG3842-PC 406 CG3842-PC 47..349 25..326 705 51.5 Plus
CG3842-PB 406 CG3842-PB 47..349 25..326 705 51.5 Plus
CG3842-PA 406 CG3842-PA 47..349 25..326 705 51.5 Plus
CG7675-PD 336 CG7675-PD 14..329 16..330 574 40.6 Plus
CG7675-PB 336 CG7675-PB 14..329 16..330 574 40.6 Plus
CG7675-PE 287 CG7675-PE 3..280 50..330 553 43.3 Plus
CG7675-PC 287 CG7675-PC 3..280 50..330 553 43.3 Plus
CG7675-PA 287 CG7675-PA 3..280 50..330 553 43.3 Plus
CG31235-PB 406 CG31235-PB 26..347 26..326 442 35 Plus
CG31235-PA 406 CG31235-PA 26..347 26..326 442 35 Plus
CG11200-PC 355 CG11200-PC 44..328 24..311 410 35.6 Plus
CG11200-PA 355 CG11200-PA 44..328 24..311 410 35.6 Plus
CG11200-PB 355 CG11200-PB 44..328 24..311 410 35.6 Plus
Wwox-PB 409 CG7221-PB 118..397 47..325 374 33 Plus
Wwox-PA 409 CG7221-PA 118..397 47..325 374 33 Plus
CG12171-PA 257 CG12171-PA 7..194 51..250 163 27.2 Plus
CG7322-PC 242 CG7322-PC 3..184 46..248 160 30.2 Plus
CG7322-PB 242 CG7322-PB 3..184 46..248 160 30.2 Plus
CG7322-PA 242 CG7322-PA 3..184 46..248 160 30.2 Plus
CG3699-PA 251 CG3699-PA 4..190 49..252 158 29.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20381-PA 417 GI20381-PA 114..407 31..324 1020 67 Plus
Dmoj\GI15186-PA 397 GI15186-PA 45..344 26..326 714 51.7 Plus
Dmoj\GI24262-PA 336 GI24262-PA 31..329 31..330 587 42.6 Plus
Dmoj\GI24267-PA 373 GI24267-PA 21..344 21..324 417 35.9 Plus
Dmoj\GI18778-PA 354 GI18778-PA 41..344 24..330 409 33.1 Plus
Dmoj\GI20381-PA 417 GI20381-PA 6..114 12..119 310 61.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20021-PA 296 GL20021-PA 1..296 37..332 1244 79.7 Plus
Dper\GL11532-PA 327 GL11532-PA 9..320 16..327 1032 64.7 Plus
Dper\GL20020-PA 332 GL20020-PA 6..322 12..327 998 63.1 Plus
Dper\GL26852-PA 356 GL26852-PA 45..311 25..326 553 45.6 Plus
Dper\GL23193-PA 336 GL23193-PA 33..329 33..330 542 42.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15882-PB 324 GA15882-PB 26..324 34..332 1267 79.6 Plus
Dpse\GA15218-PA 327 GA15218-PA 9..323 16..330 1018 62.9 Plus
Dpse\GA15878-PA 332 GA15878-PA 6..322 12..327 997 62.8 Plus
Dpse\GA17725-PA 394 GA17725-PA 45..349 25..326 682 50.5 Plus
Dpse\GA16110-PA 404 GA16110-PA 26..346 26..326 420 36 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:53:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20969-PA 327 GM20969-PA 1..327 6..332 1564 95.4 Plus
Dsec\GM20972-PA 330 GM20972-PA 9..320 16..327 1096 65.7 Plus
Dsec\GM20968-PA 331 GM20968-PA 6..327 12..332 1011 62.1 Plus
Dsec\GM20970-PA 325 GM20970-PA 9..325 16..332 995 60.3 Plus
Dsec\GM20971-PA 300 GM20971-PA 1..294 37..330 986 64.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10498-PA 327 GD10498-PA 1..327 6..332 1702 97.2 Plus
Dsim\GD10497-PA 331 GD10497-PA 6..327 12..332 1009 62.1 Plus
Dsim\GD10499-PA 325 GD10499-PA 9..325 16..332 991 59.9 Plus
Dsim\GD10500-PA 329 GD10500-PA 10..323 17..330 973 61.8 Plus
Dsim\GD20174-PA 336 GD20174-PA 18..329 20..330 581 41.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:53:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22106-PA 327 GJ22106-PA 9..320 16..327 1091 67 Plus
Dvir\GJ22105-PA 333 GJ22105-PA 6..322 12..327 1001 64.6 Plus
Dvir\GJ22107-PA 327 GJ22107-PA 9..320 16..327 990 61.5 Plus
Dvir\GJ17066-PA 358 GJ17066-PA 39..338 26..326 699 49.7 Plus
Dvir\GJ17067-PA 390 GJ17067-PA 44..343 26..326 694 50.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:53:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18000-PA 297 GK18000-PA 1..296 37..331 1232 76 Plus
Dwil\GK18001-PA 325 GK18001-PA 9..320 16..327 1085 67.3 Plus
Dwil\GK17999-PA 337 GK17999-PA 6..322 12..327 1001 63.5 Plus
Dwil\GK14728-PA 292 GK14728-PA 3..292 36..331 927 64.5 Plus
Dwil\GK14727-PA 336 GK14727-PA 44..331 38..331 901 62.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19138-PA 327 GE19138-PA 1..327 6..332 1533 93.6 Plus
Dyak\GE19140-PA 329 GE19140-PA 10..323 17..330 1018 62.1 Plus
Dyak\GE19137-PA 331 GE19137-PA 19..327 24..332 1009 63.1 Plus
Dyak\GE19139-PA 326 GE19139-PA 9..323 16..330 986 60.6 Plus
Dyak\GE19141-PA 314 GE19141-PA 9..299 16..327 971 61.5 Plus

IP09970.hyp Sequence

Translation from 2 to 1000

> IP09970.hyp
DRLASMEIVIRFLQSIAPVFLAHGIVGIIAFCVRLYMQGGKFRKQTDETG
KVAIVTGGNTGLGKETVMELARRGATVYMACRNKEKVERARREIVKETGN
SNVFSRECDLSSLDSIRKFAENFKKEQRVLHILINNAGVFWEPHRLTKEG
FEMHLGVNHIGHFLLTNLLLGVLERSAPSRVVVVASRAHERGQIKVDDIN
SSDFYDEGVAYCQSKLANILFTRELAKRLEGTGVTVNALNPGIADTEIAR
NMIFFQTKFAQTILRPLLWAVMKTPKNGAQTTLYAALDPDLERVSGQYFS
DCALAPVAPAALDDQMAQWLWAQSEKWAKIAL*

IP09970.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30495-PA 327 CG30495-PA 1..327 6..332 1677 100 Plus
CG30495-PB 331 CG30495-PB 1..331 6..332 1662 98.8 Plus
CG2064-PA 330 CG2064-PA 9..320 16..327 1093 64.7 Plus
CG30491-PB 331 CG30491-PB 6..324 12..329 1016 62.4 Plus
CG30491-PA 331 CG30491-PA 6..324 12..329 1016 62.4 Plus