Clone IP10051 Report

Search the DGRC for IP10051

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:100
Well:51
Vector:pOT2
Associated Gene/TranscriptCG6576-RA
Protein status:IP10051.pep: gold
Preliminary Size:804
Sequenced Size:1199

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6576 2005-01-01 Successful iPCR screen
CG6576 2008-04-29 Release 5.5 accounting
CG6576 2008-08-15 Release 5.9 accounting
CG6576 2008-12-18 5.12 accounting

Clone Sequence Records

IP10051.complete Sequence

1199 bp (1199 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023266

> IP10051.complete
TTGTAGTGTAGCACAAAGGAAGGCGGTGATAGGCGCTTCTCAAATAGGCT
TCGAGATAAGGATTTATGAATCAAGCTATCTGAGTCCGAGATTATCCACG
CACACTCACCCGTCCACCCAACTGCCACCCAAGCCCCCCACAACACTCGA
ACACAGACACAAGTCAAGGACATTTTTTGATAAAAAGATAAAAAATGACA
CGGCGTCGACGTCCACGATGTAAGGTGAATCCCTCGATAGCGCTGAGAAA
GAAGAAACAGGAGACTGCACCCAGTGCAGAAAAGGTAGAGCCACAACGTC
CACCGCCCTTGCCGGATCCGCCCAGCGAAGAGCCACCGGAAGTCGTCAGC
ACTTCGAGCGTAGAATCTGAAATCGAATCGGATTACAAACTCTTCCCGGA
ACTCTACGATCGCCAGCCGTCGATGCCCACGTTTGCTGATCTTTTTGGTC
AGCCCTCTTATGAATCAGTGTTGCAGGAGCCCGAGGTGGCATCTACCTCC
TCCTCAACGAACACAAATGCCGCGGGAATACGTAGTACAGACGATGGGAA
ATTCACTAATATTCCGGCCACGATGCTGTCAGATCAATTTGGGATCATTG
GGCTGCTGGCCGCCATGAGGACTACGCAAACGGATCCGGGCGCCACGCAG
CTGGTCTTTGGTGAGGATCTAACCACCTACGGACTAGATTTGGCTGCCCA
GGGAGACATTTATGTGCATTTCAATGGGCCTCTAACCCGCGAACCACCTG
ACAGAAATTCCATGGACTGCGCCCTTGAGATGGGAATGCGTGCCATGCGT
GATTCGATTATCAATGAACCACCGAAGGCTCCGTGTTGGGATCCATTTGA
GCCAGAGACCCAAGATCTGGGACTTGTGGGCAGTCTTGAACCGGATGAGT
TTACGAAATCCGATCCAGATACGGAAACGGATCCACCGCCAACTACTGAT
TTGACTGAAGATCCGGAAACGGATCGAGATGATAATCAGTATAGATAACA
CATTTGGAATCGGCGCCAAGGATAAAAAAGAAAGACTAGTCCCAAATAGA
ATAGCAATTTGGCAGTTGGTTAGATCTTTGAATACTTGGTAAAATTGTTG
ATCTTCGTGAATTGGTAGCCCTTCTGTATAAGAACTTGTTTGGCTTTAAA
TATAGAATTGGCTGAGGAGTAAAAACGGGAAAAAAAAAAAAAAAAAAAA

IP10051.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG6576-RA 1181 CG6576-RA 1..1181 1..1181 5905 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8747965..8749143 1..1179 5790 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:00:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:27:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8755989..8757169 1..1181 5905 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8749089..8750269 1..1181 5905 100 Plus
Blast to na_te.dros performed 2019-03-16 10:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy4 6852 gypsy4 GYPSY4 6852bp 2638..2697 923..864 111 65 Minus

IP10051.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:28:31 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8747965..8749143 1..1179 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:44:56 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..804 195..998 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:18 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..804 195..998 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:01:58 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..804 195..998 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:57 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..804 195..998 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:09:19 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..804 195..998 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:05:14 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..1179 1..1179 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:18 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..1179 1..1179 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:01:58 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..1179 1..1179 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:58 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..1179 1..1179 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:09:19 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
CG6576-RA 1..1179 1..1179 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:28:31 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8755989..8757167 1..1179 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:28:31 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8755989..8757167 1..1179 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:28:31 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8755989..8757167 1..1179 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:01:58 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8749089..8750267 1..1179 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:11 Download gff for IP10051.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8749089..8750267 1..1179 100   Plus

IP10051.pep Sequence

Translation from 194 to 997

> IP10051.pep
MTRRRRPRCKVNPSIALRKKKQETAPSAEKVEPQRPPPLPDPPSEEPPEV
VSTSSVESEIESDYKLFPELYDRQPSMPTFADLFGQPSYESVLQEPEVAS
TSSSTNTNAAGIRSTDDGKFTNIPATMLSDQFGIIGLLAAMRTTQTDPGA
TQLVFGEDLTTYGLDLAAQGDIYVHFNGPLTREPPDRNSMDCALEMGMRA
MRDSIINEPPKAPCWDPFEPETQDLGLVGSLEPDEFTKSDPDTETDPPPT
TDLTEDPETDRDDNQYR*

IP10051.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24352-PA 306 GF24352-PA 1..241 1..222 698 59.1 Plus
Dana\GF18660-PA 590 GF18660-PA 387..461 110..184 190 45.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14346-PA 268 GG14346-PA 1..268 1..267 1016 84.8 Plus
Dere\GG10926-PA 585 GG10926-PA 382..456 110..184 189 45.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22228-PA 205 GH22228-PA 1..197 1..228 399 39.9 Plus
Dgri\GH17541-PA 571 GH17541-PA 368..442 110..184 185 44 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG6576-PA 267 CG6576-PA 1..267 1..267 1414 100 Plus
Rga-PC 579 CG2161-PC 368..450 102..184 190 43.4 Plus
Rga-PB 579 CG2161-PB 368..450 102..184 190 43.4 Plus
Rga-PA 585 CG2161-PA 374..456 102..184 190 43.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12927-PA 272 GI12927-PA 1..247 1..228 427 39.7 Plus
Dmoj\GI22524-PA 567 GI22524-PA 364..438 110..184 182 44 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10339-PA 578 GL10339-PA 426..548 63..190 378 56.2 Plus
Dper\GL23025-PA 568 GL23025-PA 365..439 110..184 189 45.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19696-PB 568 GA19696-PB 421..541 63..190 372 55.5 Plus
Dpse\GA15276-PA 573 GA15276-PA 370..444 110..184 189 45.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25089-PA 267 GM25089-PA 1..267 1..267 1204 93.3 Plus
Dsec\GM10612-PA 579 GM10612-PA 376..450 110..184 190 45.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14125-PA 267 GD14125-PA 1..267 1..267 1193 92.1 Plus
Dsim\GD19600-PA 579 GD19600-PA 376..450 110..184 188 45.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13071-PA 236 GJ13071-PA 1..221 1..228 473 45.6 Plus
Dvir\GJ10128-PA 569 GJ10128-PA 366..440 110..184 183 44 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:51:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13370-PA 576 GK13370-PA 373..447 110..184 188 45.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20776-PA 266 GE20776-PA 1..266 1..267 1033 86.9 Plus
Dyak\GE24156-PA 585 GE24156-PA 382..456 110..184 188 45.3 Plus

IP10051.hyp Sequence

Translation from 194 to 997

> IP10051.hyp
MTRRRRPRCKVNPSIALRKKKQETAPSAEKVEPQRPPPLPDPPSEEPPEV
VSTSSVESEIESDYKLFPELYDRQPSMPTFADLFGQPSYESVLQEPEVAS
TSSSTNTNAAGIRSTDDGKFTNIPATMLSDQFGIIGLLAAMRTTQTDPGA
TQLVFGEDLTTYGLDLAAQGDIYVHFNGPLTREPPDRNSMDCALEMGMRA
MRDSIINEPPKAPCWDPFEPETQDLGLVGSLEPDEFTKSDPDTETDPPPT
TDLTEDPETDRDDNQYR*

IP10051.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6576-PA 267 CG6576-PA 1..267 1..267 1414 100 Plus
Rga-PC 579 CG2161-PC 368..450 102..184 190 43.4 Plus
Rga-PB 579 CG2161-PB 368..450 102..184 190 43.4 Plus
Rga-PA 585 CG2161-PA 374..456 102..184 190 43.4 Plus