Clone IP10134 Report

Search the DGRC for IP10134

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:101
Well:34
Vector:pOT2
Associated Gene/TranscriptCG4074-RA
Protein status:IP10134.pep: gold
Preliminary Size:888
Sequenced Size:1023

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4074 2005-01-01 Successful iPCR screen
CG4074 2008-04-29 Release 5.5 accounting
CG4074 2008-08-15 Release 5.9 accounting
CG4074 2008-12-18 5.12 accounting

Clone Sequence Records

IP10134.complete Sequence

1023 bp (1023 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023306

> IP10134.complete
CTCTTCGATATAAAATTAAAGAGAGAGAATAAGGTTTACCATGAAAATGA
CATGCTGTTGGGCTGCGTGCAGTTTCAGTGCGCCCAGGAGACAAAACACG
AAGGAATTATATTGTATCTGGAGGGAATCGTTAATCTGCAACTTAGTGCT
AAGACCGTTGGGCTTTTCGATGCTTTCTATAACTCGGTGAAACCTATTAA
TCTGCTGCAGAATAGCCTGGAGTTATCTGCGCCCGGAAAACTGAGCGCCG
GCCGTTCGGAGTTCCATTTCGAACTGCCTTTGGTGTGCAAAAAGGAACCG
CGAATTCTATATGAAACATACCACGGAGTATTCATTAACGTGAATTACCA
ACTCACTTGCACTGTAAAAAGGAATTTTCTTGGCAAAGCCACGACCAAAA
TCCAGCAGTTCTGCGTGCAATACAAACCGGTGCCTCTAAGCGAGGATTCA
AAGAAAGTGGTTCCTTTTAGTTTGAGTCCGGACTCACTGCAGAAGAATGC
CAGCGCCAAGGAGAGACTTTCCATGCCGAGATTCCTTATAACTGGGCGCC
TGGACCGGAGTGAATTCTGCGTAACAACTCCGATTACTGGCAGCATTACG
GTGCAACACACGGAGGCGGCCATTAAGTCCATTGAGATGCAATTGGTTCG
TGTGGAAACCTGCGGTTGCGACGAGGGGTACTCCAAGGATGCCACCGAAA
TCCAGACCATTCAAATAGCCGACGGCAATGTACTGCCGAAGCTAGAACTA
CCCATCCATATGGTCCTGCCCAGATTGTTCACCTGCCCTACGTTGCTCAC
GAAGAACTTCAAAATCGAGTTTGAACTTAATCTGATTGTTGTATTTAAAG
AGGACTACACGGTTAGTGAGAACTTCAAAATAGTCCTTAAACGTTCGACA
GGTCCTCTTCCCAGCAAAGTAACAACTGCAGGACGCTAAACAAATAAACT
TTCCAATATGGCAGCTATTTTATGAACATAAAAGTTAAACAACCTCGAAA
GTGTAAAAAAAAAAAAAAAAAAA

IP10134.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4074-RA 1458 CG4074-RA 320..1336 1..1017 5055 99.8 Plus
CG4074.a 1458 CG4074.a 320..1336 1..1017 5055 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20757615..20758383 817..49 3845 100 Minus
chr3L 24539361 chr3L 20757364..20757551 1004..817 940 100 Minus
chr3L 24539361 chr3L 20758438..20758486 49..1 245 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:01:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20768593..20769361 817..49 3845 100 Minus
3L 28110227 3L 20768329..20768529 1017..817 975 99 Minus
3L 28110227 3L 20769416..20769464 49..1 245 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20761693..20762461 817..49 3845 100 Minus
3L 28103327 3L 20761429..20761629 1017..817 975 99 Minus
3L 28103327 3L 20762516..20762564 49..1 245 100 Minus
Blast to na_te.dros performed on 2019-03-16 19:13:01 has no hits.

IP10134.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:13:39 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20757364..20757550 818..1004 100 <- Minus
chr3L 20757615..20758383 49..817 100 <- Minus
chr3L 20758439..20758486 1..48 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:45:17 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:20 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:33:33 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:59 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:03:15 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:05:18 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:20 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 19..1022 1..1004 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:33:33 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 19..1022 1..1004 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:56:00 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 1..888 52..939 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:03:15 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
CG4074-RA 19..1022 1..1004 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:39 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20768342..20768528 818..1004 100 <- Minus
3L 20768593..20769361 49..817 100 <- Minus
3L 20769417..20769464 1..48 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:39 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20768342..20768528 818..1004 100 <- Minus
3L 20768593..20769361 49..817 100 <- Minus
3L 20769417..20769464 1..48 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:13:39 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20768342..20768528 818..1004 100 <- Minus
3L 20768593..20769361 49..817 100 <- Minus
3L 20769417..20769464 1..48 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:33:33 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20761442..20761628 818..1004 100 <- Minus
arm_3L 20761693..20762461 49..817 100 <- Minus
arm_3L 20762517..20762564 1..48 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:13 Download gff for IP10134.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20762517..20762564 1..48 100   Minus
3L 20761693..20762461 49..817 100 <- Minus
3L 20761442..20761628 818..1004 100 <- Minus

IP10134.hyp Sequence

Translation from 0 to 938

> IP10134.hyp
LFDIKLKRENKVYHENDMLLGCVQFQCAQETKHEGIILYLEGIVNLQLSA
KTVGLFDAFYNSVKPINLLQNSLELSAPGKLSAGRSEFHFELPLVCKKEP
RILYETYHGVFINVNYQLTCTVKRNFLGKATTKIQQFCVQYKPVPLSEDS
KKVVPFSLSPDSLQKNASAKERLSMPRFLITGRLDRSEFCVTTPITGSIT
VQHTEAAIKSIEMQLVRVETCGCDEGYSKDATEIQTIQIADGNVLPKLEL
PIHMVLPRLFTCPTLLTKNFKIEFELNLIVVFKEDYTVSENFKIVLKRST
GPLPSKVTTAGR*

IP10134.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG4074-PB 295 CG4074-PB 1..295 18..312 1515 100 Plus
CG4074-PA 295 CG4074-PA 1..295 18..312 1515 100 Plus

IP10134.pep Sequence

Translation from 51 to 938

> IP10134.pep
MLLGCVQFQCAQETKHEGIILYLEGIVNLQLSAKTVGLFDAFYNSVKPIN
LLQNSLELSAPGKLSAGRSEFHFELPLVCKKEPRILYETYHGVFINVNYQ
LTCTVKRNFLGKATTKIQQFCVQYKPVPLSEDSKKVVPFSLSPDSLQKNA
SAKERLSMPRFLITGRLDRSEFCVTTPITGSITVQHTEAAIKSIEMQLVR
VETCGCDEGYSKDATEIQTIQIADGNVLPKLELPIHMVLPRLFTCPTLLT
KNFKIEFELNLIVVFKEDYTVSENFKIVLKRSTGPLPSKVTTAGR*

IP10134.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24116-PA 316 GF24116-PA 22..316 1..295 1445 90.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13288-PA 182 GG13288-PA 2..182 115..295 905 94.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16978-PA 291 GH16978-PA 1..291 1..295 1272 79.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG4074-PB 295 CG4074-PB 1..295 1..295 1515 100 Plus
CG4074-PA 295 CG4074-PA 1..295 1..295 1515 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11892-PA 314 GI11892-PA 24..314 1..295 1282 80.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12756-PA 184 GL12756-PA 45..184 140..295 574 75.6 Plus
Dper\GL12756-PA 184 GL12756-PA 1..70 1..70 344 91.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17938-PA 302 GA17938-PA 1..295 1..295 1447 91.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22191-PA 295 GM22191-PA 1..295 1..295 1539 98.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12166-PA 295 GD12166-PA 1..295 1..295 1547 99.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13770-PA 314 GJ13770-PA 24..314 1..295 1289 80.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12303-PA 295 GK12303-PA 1..291 1..284 1258 82.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22736-PA 295 GE22736-PA 1..295 1..295 1508 96.3 Plus
Dyak\GE22386-PA 295 GE22386-PA 1..295 1..295 1503 95.9 Plus