Clone IP10135 Report

Search the DGRC for IP10135

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:101
Well:35
Vector:pOT2
Associated Gene/Transcriptl(2)35Bc-RA
Protein status:IP10135.pep: gold
Preliminary Size:861
Sequenced Size:1094

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4103 2005-01-01 Successful iPCR screen
CG4103 2008-04-29 Release 5.5 accounting
CG4103 2008-08-15 Release 5.9 accounting
CG4103 2008-12-18 5.12 accounting

Clone Sequence Records

IP10135.complete Sequence

1094 bp (1094 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023310

> IP10135.complete
GAAAACATCAATCAGCTGTTGCATGGCCTGCAGCAGATTCGAGTACGTTA
AATCCTTTGAGCAGGACGACAGCATACTGCCTAATGTGTGGATAGTCATA
CGAATAGACGGCAAAAAGTTCCACAAGTTCTCCAAGACGCACGATTTTGA
AAAGCCCAACGATGAAAATGCTCTCAATGTGATGAATGCTGCTGCCACGG
CGGTGATGCAGGAGTTTCGGGATATTGTCCTCGCCTACGGTCAAAGTGAT
GAGTACTCCTTTGTTTTTCGCAAAGAGACGGCAGCGTTCAAGCGACGATC
CGCCAAACTGCTCACCTACGTCACCAGCTTGTTCTCCTCGAGCTATGTAA
TGCAATGGTCCAAGTGGATGAATCTGCCATTGGCCTATGCTCCGTGTTTC
GATGGTCGCGTTGTTCTGTATCCTTCGGAGCAGAATCTAAAGGACTATCT
CAGCTGGCGACAGGCCGATGTGCATGTGAACAACCTGTACAATACCGCCT
TTTGGAAACTCGTTTTGGAAAAAGGCCTGACGAACCAGCAAGCCGAGGCG
AAACTCCGTGGCACCTTTTCGGCGGACAAAAATGAGCTGCTCTTCCAGGA
ATTCGGGATAAATTACAACAATCTGCCGGCAATGTACAGAAAGGGAACGA
TTCTGCTGAGAAAACGCGTGATATTGGGTGAGAAGAGCAGGCAGGCCGTG
GTGCCGCTGCACGAGGATCTGATATCTTCGCAGTTCTGGAAGGAACACAC
CGAAATATTGGGAAAATATGTGCCAGGCACATACGACGCACCACAAACTT
TTCCCCGATTGGTGGAGATGCAAATAAATGGCAAGGATGACAATGAGGCG
GAGGAGCCACAAAATCTGGCTGGTACCAGCTGATATAATAACGAATAGTC
TTGCATTTTTAAAGATTAAAGTTACGATACATCTAAGGAAGTCGTTTCGG
AGATTGAGGATGCGGTGCCCAGGCTGCTGGAGTGAAGGACAAACGGATGA
TCCGTAATGAAGAGTAGCTAATAGTTGAAAGTTCAACTTATGGCATATAT
TTTAAGATTAAATCTACACTAAGCTCAAAAAAAAAAAAAAAAAA

IP10135.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4103.a 1076 CG4103.a 1..1076 1..1076 5380 100 Plus
CG4103.b 1099 CG4103.b 138..1099 21..982 4810 100 Plus
NC2beta.a 660 NC2beta.a 610..660 1077..1027 255 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15007282..15008188 1076..170 4535 100 Minus
chr2L 23010047 chr2L 15008243..15008392 170..21 750 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:01:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15008488..15009395 1077..170 4540 100 Minus
2L 23513712 2L 15009450..15009599 170..21 750 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15008488..15009395 1077..170 4540 100 Minus
2L 23513712 2L 15009450..15009599 170..21 750 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:15:18 has no hits.

IP10135.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:16:06 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15007282..15008187 171..1076 100 <- Minus
chr2L 15008243..15008391 22..170 100 <- Minus
chr2L 15008497..15008517 1..21 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:45:18 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
CG4103-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:22 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Bc-RB 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:41:20 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Bc-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:56:00 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
CG4103-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:47:29 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Bc-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:05:20 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
CG4103-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:22 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Bc-RB 1..1076 1..1076 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:20 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Bc-RB 1..1076 1..1076 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:56:01 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
CG4103-RA 1..861 23..883 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:47:29 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)35Bc-RB 1..1076 1..1076 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:06 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15008489..15009394 171..1076 100 <- Minus
2L 15009450..15009598 22..170 100 <- Minus
2L 15009704..15009724 1..21 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:06 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15008489..15009394 171..1076 100 <- Minus
2L 15009450..15009598 22..170 100 <- Minus
2L 15009704..15009724 1..21 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:06 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15008489..15009394 171..1076 100 <- Minus
2L 15009450..15009598 22..170 100 <- Minus
2L 15009704..15009724 1..21 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:20 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15009450..15009598 22..170 100 <- Minus
arm_2L 15008489..15009394 171..1076 100 <- Minus
arm_2L 15009704..15009724 1..21 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:15 Download gff for IP10135.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15008489..15009394 171..1076 100 <- Minus
2L 15009450..15009598 22..170 100 <- Minus
2L 15009704..15009724 1..21 100   Minus

IP10135.hyp Sequence

Translation from 0 to 882

> IP10135.hyp
KTSISCCMACSRFEYVKSFEQDDSILPNVWIVIRIDGKKFHKFSKTHDFE
KPNDENALNVMNAAATAVMQEFRDIVLAYGQSDEYSFVFRKETAAFKRRS
AKLLTYVTSLFSSSYVMQWSKWMNLPLAYAPCFDGRVVLYPSEQNLKDYL
SWRQADVHVNNLYNTAFWKLVLEKGLTNQQAEAKLRGTFSADKNELLFQE
FGINYNNLPAMYRKGTILLRKRVILGEKSRQAVVPLHEDLISSQFWKEHT
EILGKYVPGTYDAPQTFPRLVEMQINGKDDNEAEEPQNLAGTS*

IP10135.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)35Bc-PB 286 CG4103-PB 1..286 8..293 1501 100 Plus
l(2)35Bc-PA 286 CG4103-PA 1..286 8..293 1501 100 Plus

IP10135.pep Sequence

Translation from 22 to 882

> IP10135.pep
MACSRFEYVKSFEQDDSILPNVWIVIRIDGKKFHKFSKTHDFEKPNDENA
LNVMNAAATAVMQEFRDIVLAYGQSDEYSFVFRKETAAFKRRSAKLLTYV
TSLFSSSYVMQWSKWMNLPLAYAPCFDGRVVLYPSEQNLKDYLSWRQADV
HVNNLYNTAFWKLVLEKGLTNQQAEAKLRGTFSADKNELLFQEFGINYNN
LPAMYRKGTILLRKRVILGEKSRQAVVPLHEDLISSQFWKEHTEILGKYV
PGTYDAPQTFPRLVEMQINGKDDNEAEEPQNLAGTS*

IP10135.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14997-PA 286 GF14997-PA 1..286 1..286 1323 85 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24229-PA 287 GG24229-PA 1..287 1..286 1461 94.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10821-PA 286 GH10821-PA 1..283 1..276 1167 74.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
THG-PB 286 CG4103-PB 1..286 1..286 1501 100 Plus
THG-PA 286 CG4103-PA 1..286 1..286 1501 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17333-PA 284 GI17333-PA 1..279 1..276 1197 76.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25730-PA 293 GL25730-PA 1..293 1..286 1341 84.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17959-PA 293 GA17959-PA 1..293 1..286 1345 84.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14588-PA 287 GM14588-PA 1..287 1..286 1504 97.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21976-PA 287 GD21976-PA 1..287 1..286 1516 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16007-PA 278 GJ16007-PA 1..274 1..271 1191 78.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18307-PA 282 GK18307-PA 1..279 1..276 1228 80.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24732-PA 287 GE24732-PA 1..287 1..286 1455 94.1 Plus