BDGP Sequence Production Resources |
Search the DGRC for IP10364
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 103 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | Rrp42-RA |
Protein status: | IP10364.pep: gold |
Preliminary Size: | 915 |
Sequenced Size: | 1280 |
Gene | Date | Evidence |
---|---|---|
CG8395 | 2005-01-01 | Successful iPCR screen |
Rrp42 | 2008-04-29 | Release 5.5 accounting |
Rrp42 | 2008-08-15 | Release 5.9 accounting |
Rrp42 | 2008-12-18 | 5.12 accounting |
1280 bp (1280 high quality bases) assembled on 2006-01-26
GenBank Submission: BT024331
> IP10364.complete CGCAGACCGAAACAAAAGTGAAAACGTGCAAAAAACCAAACCCAAAAACA AATTCAACCGAGAAGTAGAAGCAAGCGGCAAAGAAGAGAGCGAGAGGGCG ACCAATACAAAAGCGACAAAATGTGCGACGCTGCGGCGGCAACAGCGACA ACAACAACAACAGCAGCAGTAGCAGCAGCCGTCGCAACAACAACAGCATC GGTAGCATTGGAGGCCACAGCGACACAGCCTGGAACGACAACGACGACGG TAGCCACTGCGTCAGCGGGAACCACATCCCCTGAAGCGGCCATTCCAACA GCAGCAACAGCAACATCGCCGACCGTTCGCTGTTTCTTGAATTAAGTCTA AAATGGCATACGTTGCACTGAGCGAAGCTGAAAAAACATATATTCTACAC GGCGTGGAGGATGACTTTCGTTGCGATGGACGTTCACGACGAGATTACCG GCCCATGGACCTGGAAACTGGACTGGTTAGCAATGCCAGTGGATCCGCTC GCCTTCGGCTGGCGAACACAGACATACTGGTGGGCGTCAAAACCGAGATT GATGTACCCAACCCGCTGACGCCCGAGTTTGGTAAACTGGAATTTTTTGT GGATTGCTCTGCTAATGCCACGCCGGAGTTTGAAGGACGCGGGGGCTCGG ATCTGGCCCAAGAACTTATTCTCTCCCTGCAGAACGCCTACGAATCGCCA TTGGCCTTCAACTACCGCACGTTGTGCCTCATTCCGGGTCAGCAGTGCTG GAAGCTGTACATAGACATCCTGATTCTGGAGTGTGGCGGCAATCTACACG ACGCAGTGTCGCTGGCCGCCAAAGCGGCTCTGTTCAACACAAAGCTGCCC CGGGTGACAGCCACCATGTTGGATGCCGGCATCACAGACCTCATCATATC GGACAATCCGTATGACTGCACCCGCATCGGCATCGAGACGGTTCCGCTGT TGGTCACAGTTTGCAAGATCGGTGATTATGTCCTGGTGGATCCTTCGGCG GAGGAGGAAGTCTGCAGCACAGTGAGCATGGTTGTGTCAGTTTCCATGCG GAATGGACAGGCATTCCTTTCGGGTACACACTTGACCGGCGGCGGAGCCA TGCACCGGGACACCATGCGCAACTGTCTGGAGCTGGGTCTGGCCATTGGC GAGCATCTGGACCGGCTGCTCACTAAAATGCTAAATCTGGAGCAGCAGCG CGTCGGACTCAAGCGACCGCAAATAGTAGGATTTCTTAAATAAAGCGGCA AAGTCTTGTAATGAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11902828..11903319 | 772..1263 | 2460 | 100 | Plus |
chrX | 22417052 | chrX | 16312882..16313203 | 1..322 | 1595 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 11902359..11902557 | 408..606 | 995 | 100 | Plus |
chr2R | 21145070 | chr2R | 11902608..11902774 | 606..772 | 835 | 100 | Plus |
chr2R | 21145070 | chr2R | 11902227..11902304 | 333..410 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16015559..16016054 | 772..1267 | 2480 | 100 | Plus |
X | 23542271 | X | 16423160..16423481 | 1..322 | 1595 | 99.7 | Plus |
2R | 25286936 | 2R | 16015090..16015288 | 408..606 | 995 | 100 | Plus |
2R | 25286936 | 2R | 16015339..16015505 | 606..772 | 835 | 100 | Plus |
2R | 25286936 | 2R | 16014958..16015035 | 333..410 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16016758..16017253 | 772..1267 | 2480 | 100 | Plus |
X | 23527363 | X | 16431258..16431579 | 1..322 | 1595 | 99.6 | Plus |
2R | 25260384 | 2R | 16016289..16016487 | 408..606 | 995 | 100 | Plus |
2R | 25260384 | 2R | 16016538..16016704 | 606..772 | 835 | 100 | Plus |
2R | 25260384 | 2R | 16016157..16016234 | 333..410 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6898 | 149..325 | 291 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2514 | 140..323 | 288 | 63.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2671..2988 | 6..323 | 257 | 57.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6699..6923 | 90..314 | 254 | 59.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2380..2665 | 32..315 | 232 | 58.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2320..2646 | 11..323 | 175 | 54.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6863 | 184..317 | 172 | 61.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2598..2817 | 108..323 | 153 | 56.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6828 | 215..315 | 147 | 62.4 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 90..177 | 234..321 | 134 | 65.9 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9120..9207 | 234..321 | 134 | 65.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6776 | 263..317 | 131 | 70.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2397 | 239..323 | 130 | 63.5 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3192..3332 | 186..332 | 127 | 61.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6818 | 218..317 | 126 | 62 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6797 | 257..317 | 125 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2148..2384 | 83..325 | 119 | 52.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2427 | 191..317 | 118 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2364 | 259..317 | 115 | 66.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2218..2343 | 193..317 | 113 | 58.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2309..2397 | 225..317 | 112 | 62.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11902223..11902303 | 326..409 | 96 | -> | Plus |
chr2R | 11902361..11902557 | 410..606 | 100 | -> | Plus |
chr2R | 11902609..11902774 | 607..772 | 100 | -> | Plus |
chr2R | 11902829..11903319 | 773..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..891 | 353..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..891 | 353..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..891 | 353..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..891 | 353..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..891 | 353..1243 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..911 | 353..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..911 | 353..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 46..981 | 326..1263 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 1..911 | 353..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rrp42-RA | 46..981 | 326..1263 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16014953..16015034 | 326..409 | 96 | -> | Plus |
2R | 16015092..16015288 | 410..606 | 100 | -> | Plus |
2R | 16015340..16015505 | 607..772 | 100 | -> | Plus |
2R | 16015560..16016050 | 773..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16014953..16015034 | 326..409 | 96 | -> | Plus |
2R | 16015092..16015288 | 410..606 | 100 | -> | Plus |
2R | 16015340..16015505 | 607..772 | 100 | -> | Plus |
2R | 16015560..16016050 | 773..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16014953..16015034 | 326..409 | 96 | -> | Plus |
2R | 16015092..16015288 | 410..606 | 100 | -> | Plus |
2R | 16015340..16015505 | 607..772 | 100 | -> | Plus |
2R | 16015560..16016050 | 773..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11902458..11902539 | 326..409 | 96 | -> | Plus |
arm_2R | 11902597..11902793 | 410..606 | 100 | -> | Plus |
arm_2R | 11902845..11903010 | 607..772 | 100 | -> | Plus |
arm_2R | 11903065..11903555 | 773..1263 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16016152..16016233 | 326..409 | 96 | -> | Plus |
2R | 16016291..16016487 | 410..606 | 100 | -> | Plus |
2R | 16016539..16016704 | 607..772 | 100 | -> | Plus |
2R | 16016759..16017249 | 773..1263 | 100 | Plus |
Translation from 352 to 1242
> IP10364.pep MAYVALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSAR LRLANTDILVGVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSD LAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYIDILILECGGNLHD AVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLL VTVCKIGDYVLVDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAM HRDTMRNCLELGLAIGEHLDRLLTKMLNLEQQRVGLKRPQIVGFLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11284-PA | 296 | GF11284-PA | 1..296 | 1..296 | 1365 | 88.2 | Plus |
Dana\GF22565-PA | 412 | GF22565-PA | 13..293 | 7..295 | 178 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20559-PA | 296 | GG20559-PA | 1..296 | 1..296 | 1522 | 96.6 | Plus |
Dere\GG18224-PA | 415 | GG18224-PA | 13..281 | 7..283 | 155 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22060-PA | 296 | GH22060-PA | 1..296 | 1..296 | 1359 | 88.5 | Plus |
Dgri\GH14641-PA | 415 | GH14641-PA | 13..281 | 7..283 | 180 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rrp42-PA | 296 | CG8395-PA | 1..296 | 1..296 | 1525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19145-PA | 296 | GI19145-PA | 1..296 | 1..296 | 1355 | 88.5 | Plus |
Dmoj\GI11625-PA | 417 | GI11625-PA | 13..292 | 7..295 | 169 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10119-PA | 296 | GL10119-PA | 1..296 | 1..296 | 1362 | 87.8 | Plus |
Dper\GL26867-PA | 398 | GL26867-PA | 13..281 | 7..283 | 147 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21043-PA | 296 | GA21043-PA | 1..296 | 1..296 | 1356 | 87.2 | Plus |
Dpse\GA21908-PA | 398 | GA21908-PA | 13..288 | 7..288 | 148 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21652-PA | 467 | GM21652-PA | 1..140 | 1..140 | 757 | 98.6 | Plus |
Dsec\GM13365-PA | 405 | GM13365-PA | 13..280 | 7..282 | 148 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11151-PA | 281 | GD11151-PA | 4..281 | 19..296 | 1456 | 98.6 | Plus |
Dsim\GD15722-PA | 407 | GD15722-PA | 13..281 | 7..283 | 157 | 24.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22278-PA | 296 | GJ22278-PA | 1..296 | 1..296 | 1344 | 87.8 | Plus |
Dvir\GJ11305-PA | 423 | GJ11305-PA | 13..281 | 7..283 | 161 | 25.6 | Plus |
Translation from 352 to 1242
> IP10364.hyp MAYVALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSAR LRLANTDILVGVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSD LAQELILSLQNAYESPLAFNYRTLCLIPGQQCWKLYIDILILECGGNLHD AVSLAAKAALFNTKLPRVTATMLDAGITDLIISDNPYDCTRIGIETVPLL VTVCKIGDYVLVDPSAEEEVCSTVSMVVSVSMRNGQAFLSGTHLTGGGAM HRDTMRNCLELGLAIGEHLDRLLTKMLNLEQQRVGLKRPQIVGFLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rrp42-PA | 296 | CG8395-PA | 1..296 | 1..296 | 1525 | 100 | Plus |