Clone IP10371 Report

Search the DGRC for IP10371

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:103
Well:71
Vector:pOT2
Associated Gene/TranscriptCG9458-RA
Protein status:IP10371.pep: gold
Preliminary Size:795
Sequenced Size:920

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9458 2005-01-01 Successful iPCR screen
CG9458 2008-04-29 Release 5.5 accounting
CG9458 2008-08-15 Release 5.9 accounting
CG9458 2008-12-18 5.12 accounting

Clone Sequence Records

IP10371.complete Sequence

920 bp assembled on 2006-11-09

GenBank Submission: BT023378

> IP10371.complete
CACAATCGCAATGTTGGGTGATCTAGTGGACTTTTTGGGCAAATCCCCAC
CCGATCCTGTGCGCCTGCCACTCCTGGCCAGCCACAAGCCCGTCCTGATG
GTATTGGCCACCTACCTGTTCTTCGTAAAGATAGCGGGTCCAAAGATCAT
GCGGAATCGAAAGCCCTTTGACCTTCGCGGTCTGATAAAGGCGTACAACA
TCATGCAGATCGTGTACAATGTCATCATGTGCTTTTTTGCTGTCCACTTC
ATGCTGGGACCCGGAGACTATAACTTTAAGTGCATCAAGAACCTGCCGCC
GGATCATGAGTACAAGACCTGGGAGCGCTGGCTTACGTACTCGTACTTCT
TCAATAAGCTGCTCGATCTGCTGGAGACGGTCTTCTTTGTGCTGCGAAAG
AAGGATCGCCAGATATCCTTTCTGCACGTCTTCCATCACATGTACATGCT
GTACTTCAGCTTTATGTATCTGTACTACTACGGATACGGTGGTCATGGGT
TCTTTATGTGCTTCTTCAACGTCGTCGTGCACATCATGATGTACAGCTAC
TACTATCAGTCGTCGCTCAATCGCGATTCGAAGGGCGATCTGTGGTGGAA
GAAGTACATCACTATCGTTCAGCTCATCCAGTTTGGAATCGTTCTGGGGC
ATAGTATCTACACCCTAAAGCAACCGGACTGTCCATCAGCCCGGTTCTCG
GCGACCTGTGCCGGCAGCATCTCCGTTGTGTTCATCATCTTATTTAGCAA
CTTCTATTTTCATGCCTATATTCGACCCAAGAAAAGGAAACAGAAAAACA
TCTAAGCTAGAGCCAGTCATCAGATTTGTTCTGTGCAGCATTTAGATCTC
TATAGAGAAACCTATTTTAATTTTAGAGCTAATAAAAAACATAAAGATGT
AAAAAAAAAAAAAAAAAAAA

IP10371.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9458-RA 1046 CG9458-RA 147..1046 1..900 4500 100 Plus
CG9459.a 1071 CG9459.a 380..821 194..635 845 79.4 Plus
CG9459-RA 1071 CG9459-RA 380..821 194..635 845 79.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:11:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5644734..5645395 900..239 3280 99.7 Minus
chr3R 27901430 chr3R 5645459..5645697 239..1 1195 100 Minus
chr3R 27901430 chr3R 5643494..5643888 635..241 790 80 Minus
chr3R 27901430 chr3R 5639094..5639252 281..439 390 83 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:01:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:11:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9818913..9819575 901..239 3315 100 Minus
3R 32079331 3R 9819639..9819877 239..1 1195 100 Minus
3R 32079331 3R 9817675..9818069 635..241 790 80 Minus
3R 32079331 3R 9813275..9813433 281..439 390 83 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9559744..9560406 901..239 3315 100 Minus
3R 31820162 3R 9560470..9560708 239..1 1195 100 Minus
3R 31820162 3R 9558506..9558900 635..241 790 80 Minus
3R 31820162 3R 9554106..9554264 281..439 390 83 Plus
3R 31820162 3R 9557300..9557383 439..356 165 79.7 Minus
Blast to na_te.dros performed on 2019-03-16 10:11:31 has no hits.

IP10371.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:12:18 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5644734..5645395 239..900 99 <- Minus
chr3R 5645460..5645697 1..238 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:45:41 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..795 11..805 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:19:34 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..795 11..805 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:38:01 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..795 11..805 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:35:38 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..795 11..805 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:59:25 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..795 11..805 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:47:56 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..900 1..900 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:19:34 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..900 1..900 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:01 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..900 1..900 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:35:39 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..900 1..900 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:59:25 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
CG9458-RA 1..900 1..900 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:12:18 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9818914..9819575 239..900 100 <- Minus
3R 9819640..9819877 1..238 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:12:18 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9818914..9819575 239..900 100 <- Minus
3R 9819640..9819877 1..238 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:12:18 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9818914..9819575 239..900 100 <- Minus
3R 9819640..9819877 1..238 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:01 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5644636..5645297 239..900 100 <- Minus
arm_3R 5645362..5645599 1..238 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:48:54 Download gff for IP10371.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9559745..9560406 239..900 100 <- Minus
3R 9560471..9560708 1..238 100   Minus

IP10371.hyp Sequence

Translation from 0 to 804

> IP10371.hyp
TIAMLGDLVDFLGKSPPDPVRLPLLASHKPVLMVLATYLFFVKIAGPKIM
RNRKPFDLRGLIKAYNIMQIVYNVIMCFFAVHFMLGPGDYNFKCIKNLPP
DHEYKTWERWLTYSYFFNKLLDLLETVFFVLRKKDRQISFLHVFHHMYML
YFSFMYLYYYGYGGHGFFMCFFNVVVHIMMYSYYYQSSLNRDSKGDLWWK
KYITIVQLIQFGIVLGHSIYTLKQPDCPSARFSATCAGSISVVFIILFSN
FYFHAYIRPKKRKQKNI*

IP10371.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:26:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9458-PA 264 CG9458-PA 1..264 4..267 1436 100 Plus
CG9459-PA 265 CG9459-PA 1..260 4..263 1025 69.6 Plus
CG8534-PA 265 CG8534-PA 14..252 18..257 710 56.2 Plus
eloF-PA 257 CG16905-PA 3..253 15..265 679 49.4 Plus
CG16904-PA 262 CG16904-PA 11..258 18..265 645 46 Plus

IP10371.pep Sequence

Translation from 10 to 804

> IP10371.pep
MLGDLVDFLGKSPPDPVRLPLLASHKPVLMVLATYLFFVKIAGPKIMRNR
KPFDLRGLIKAYNIMQIVYNVIMCFFAVHFMLGPGDYNFKCIKNLPPDHE
YKTWERWLTYSYFFNKLLDLLETVFFVLRKKDRQISFLHVFHHMYMLYFS
FMYLYYYGYGGHGFFMCFFNVVVHIMMYSYYYQSSLNRDSKGDLWWKKYI
TIVQLIQFGIVLGHSIYTLKQPDCPSARFSATCAGSISVVFIILFSNFYF
HAYIRPKKRKQKNI*

IP10371.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17148-PA 263 GF17148-PA 1..262 1..264 915 67.4 Plus
Dana\GF15498-PA 253 GF15498-PA 3..253 12..261 650 48.2 Plus
Dana\GF15497-PA 253 GF15497-PA 3..252 12..259 646 50.8 Plus
Dana\GF22463-PA 260 GF22463-PA 3..253 12..262 590 45.8 Plus
Dana\GF13996-PA 269 GF13996-PA 2..257 9..263 581 46.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17318-PA 264 GG17318-PA 1..264 1..264 1182 87.9 Plus
Dere\GG17319-PA 264 GG17319-PA 1..261 1..261 881 67.8 Plus
Dere\GG17214-PA 265 GG17214-PA 1..259 5..262 671 51.3 Plus
Dere\GG17320-PA 260 GG17320-PA 1..258 5..262 606 43.4 Plus
Dere\GG11234-PA 253 GG11234-PA 6..253 11..261 573 42.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 00:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22831-PA 416 GH22831-PA 185..415 34..264 517 44 Plus
Dgri\GH19804-PA 261 GH19804-PA 10..259 14..262 489 40.4 Plus
Dgri\GH22831-PA 416 GH22831-PA 6..181 9..185 417 45.2 Plus
Dgri\GH17398-PA 285 GH17398-PA 38..262 27..253 415 40.4 Plus
Dgri\GH19803-PA 217 GH19803-PA 1..217 47..262 408 39.5 Plus
Dgri\GH19244-PA 298 GH19244-PA 16..256 8..253 367 37.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9458-PA 264 CG9458-PA 1..264 1..264 1436 100 Plus
CG9459-PA 265 CG9459-PA 1..260 1..260 1025 69.6 Plus
CG8534-PA 265 CG8534-PA 14..252 15..254 710 56.2 Plus
eloF-PA 257 CG16905-PA 3..253 12..262 679 49.4 Plus
CG16904-PA 262 CG16904-PA 11..258 15..262 645 46 Plus
CG31141-PA 253 CG31141-PA 11..252 15..260 578 43.3 Plus
CG18609-PA 263 CG18609-PA 11..257 15..260 526 42.5 Plus
CG17821-PA 262 CG17821-PA 5..262 5..261 501 36.9 Plus
CG5326-PA 277 CG5326-PA 38..262 27..253 428 38.8 Plus
bond-PC 322 CG6921-PC 28..261 21..257 415 38.2 Plus
bond-PA 322 CG6921-PA 28..261 21..257 415 38.2 Plus
bond-PB 322 CG6921-PB 28..261 21..257 415 38.2 Plus
CG2781-PA 329 CG2781-PA 13..260 4..255 409 37 Plus
sit-PA 295 CG5278-PA 29..260 21..261 406 40.5 Plus
CG31522-PH 364 CG31522-PH 27..257 20..253 388 35.1 Plus
CG31522-PG 364 CG31522-PG 27..257 20..253 388 35.1 Plus
CG31522-PA 364 CG31522-PA 27..257 20..253 388 35.1 Plus
CG6660-PA 272 CG6660-PA 19..267 14..263 387 35.7 Plus
CG31522-PF 365 CG31522-PF 27..258 20..253 379 34.6 Plus
CG31522-PB 365 CG31522-PB 27..258 20..253 379 34.6 Plus
CG31522-PD 365 CG31522-PD 27..258 20..253 379 34.6 Plus
CG31522-PI 392 CG31522-PI 27..285 20..253 367 33.3 Plus
CG33110-PA 337 CG33110-PA 55..300 14..261 357 33.7 Plus
CG31523-PF 354 CG31523-PF 14..269 4..264 352 32.5 Plus
CG31523-PE 354 CG31523-PE 14..269 4..264 352 32.5 Plus
CG31523-PG 354 CG31523-PG 14..269 4..264 352 32.5 Plus
CG31523-PD 354 CG31523-PD 14..269 4..264 352 32.5 Plus
CG31523-PA 354 CG31523-PA 14..269 4..264 352 32.5 Plus
CG31523-PB 354 CG31523-PB 14..269 4..264 352 32.5 Plus
CG31523-PC 354 CG31523-PC 14..269 4..264 352 32.5 Plus
Elo68beta-PB 269 CG11801-PB 30..259 20..253 298 31.8 Plus
CG30008-PA 266 CG30008-PA 25..258 28..262 285 31.7 Plus
Elo68alpha-PA 262 CG32072-PA 23..252 20..253 280 31.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10225-PA 258 GI10225-PA 3..258 7..262 579 43.8 Plus
Dmoj\GI10223-PA 260 GI10223-PA 1..255 5..260 557 41 Plus
Dmoj\GI20344-PA 262 GI20344-PA 13..262 14..262 521 44 Plus
Dmoj\GI20345-PA 249 GI20345-PA 6..249 20..262 512 43.9 Plus
Dmoj\GI20343-PA 262 GI20343-PA 1..262 21..261 469 41.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23222-PA 264 GL23222-PA 3..261 7..263 726 55.3 Plus
Dper\GL23223-PA 262 GL23223-PA 1..259 5..263 632 45.2 Plus
Dper\GL11311-PA 284 GL11311-PA 12..254 15..256 472 39.5 Plus
Dper\GL11310-PA 263 GL11310-PA 4..262 3..260 450 38.6 Plus
Dper\GL13683-PA 277 GL13683-PA 38..271 27..262 410 38.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21802-PA 264 GA21802-PA 3..261 7..263 732 56 Plus
Dpse\GA14209-PA 262 GA14209-PA 3..259 7..263 640 46.3 Plus
Dpse\GA15013-PA 286 GA15013-PA 12..254 15..256 472 39.5 Plus
Dpse\GA14683-PA 263 GA14683-PA 4..262 3..260 452 38.6 Plus
Dpse\GA18806-PA 277 GA18806-PA 38..271 27..262 410 38.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26204-PA 218 GM26204-PA 1..192 1..192 993 96.9 Plus
Dsec\GM26205-PA 270 GM26205-PA 1..261 1..261 913 69 Plus
Dsec\GM23845-PA 265 GM23845-PA 1..262 2..264 700 51.3 Plus
Dsec\GM23846-PA 258 GM23846-PA 3..254 12..263 678 50 Plus
Dsec\GM26206-PA 262 GM26206-PA 3..259 7..263 621 44.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:35:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20751-PA 264 GD20751-PA 1..264 1..264 1346 96.2 Plus
Dsim\GD20752-PA 265 GD20752-PA 1..262 1..262 901 67.9 Plus
Dsim\GD18652-PA 265 GD18652-PA 1..262 2..264 694 51 Plus
Dsim\GD18654-PA 263 GD18654-PA 3..256 12..263 672 49.6 Plus
Dsim\GD20753-PA 262 GD20753-PA 3..259 7..263 621 44.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 00:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11026-PA 263 GJ11026-PA 11..256 15..260 631 45.5 Plus
Dvir\GJ11028-PA 261 GJ11028-PA 3..257 7..261 551 42.7 Plus
Dvir\GJ22069-PA 248 GJ22069-PA 1..237 19..254 520 43.5 Plus
Dvir\GJ11027-PA 244 GJ11027-PA 3..231 7..256 494 42 Plus
Dvir\GJ22068-PA 217 GJ22068-PA 1..217 47..262 452 41.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 00:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20708-PA 255 GK20708-PA 11..255 15..259 473 39.2 Plus
Dwil\GK20709-PA 266 GK20709-PA 6..243 27..264 458 39.8 Plus
Dwil\GK20706-PA 215 GK20706-PA 1..215 47..261 437 44.7 Plus
Dwil\GK20710-PA 205 GK20710-PA 1..204 5..208 428 40.2 Plus
Dwil\GK14434-PA 285 GK14434-PA 38..262 27..253 409 40 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24722-PA 264 GE24722-PA 1..264 1..264 1246 92.8 Plus
Dyak\GE24723-PA 264 GE24723-PA 1..260 1..260 879 68.1 Plus
Dyak\GE25995-PA 254 GE25995-PA 3..254 12..263 677 49.6 Plus
Dyak\GE25994-PA 264 GE25994-PA 1..258 5..260 639 52.9 Plus
Dyak\GE24724-PA 262 GE24724-PA 1..259 5..263 621 44 Plus