Clone IP10471 Report

Search the DGRC for IP10471

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:104
Well:71
Vector:pOT2
Associated Gene/TranscriptCG34375-RA
Protein status:IP10471.pep: validated full length
Preliminary Size:1041
Sequenced Size:2074

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13835 2005-01-01 Successful iPCR screen
CG34375 2008-04-29 Release 5.5 accounting
CG34375 2008-08-15 Release 5.9 accounting
CG34375 2008-12-18 5.12 accounting

Clone Sequence Records

IP10471.complete Sequence

2074 bp (2074 high quality bases) assembled on 2006-09-12

GenBank Submission: BT029080

> IP10471.complete
ATCTACGCCTGCGCGAACGGCACATTGGGACTGAATTTGAGCCGTGCCCC
CTGGGATCCGTATCCTTGGGTTAGCGGGGTGCAGGCCAAGTCGAGTGCGG
AAAGGGGCGGAGTTCGTTTGGGCGACACCCTGCTGGAGCTGAATGGAGCC
GATGTCCTGGGGCTAAAAATCAGTGAGTTGGCCAATCGGTTGCAGGATCA
CTGGCAGAGCGGCGCCGAGGTCGTGACCCTGATGATGTGGCGCCAGCAGG
CGAACATCGACCCCAATGAGGATCCTGCCGAGGCATCACATGCTGTGCAC
GGCATTAATCAACAATCGCTGCAAAAGTTTGCAACATGCCTGCAACATAT
TTCCCAATTACTGGAGTGTCCTGTGTGCCTTGAGGTCATCAAACCACCTG
GCTGGCAGTGCTGCAATGGACACGTGCTCTGCAATAATTGCCGCAGTCGC
TCCGTAAAGTGTCCCGTGTGCCGAGTTCCTTTGGGGCCGAGAGGCCGCTG
TCTGCTGTCGGACAAACTGTTCACCCTGCTGGCGGAGAGTTTCCCCTGCG
ATGGCGGGAAAACCAACAAGGTGGCTGCCTCCCAGGGCCATGGAAAGCTG
AGCAGCGTCAACAAGTGCACAAATGAATATCATAATCAACCGAAAATGGC
GCTGGCGAAGACGAGTTCCGGCAAGTCCAAGTGCGGCAAGCAAATCTCCA
GGCAACTCGAAACAGTTTTGGTGGACCAAAGTCCTCGGGAAATCAGAAGA
AAGAGTCAGCAGGGGCAGGAGCAGGAGCAGGCGGTGCAGGAGGCTGTCCT
GCCACGTTGCACGCTGATAAAAGTGCAGCATCAGGAGGCCGCTGTCGAGC
ACTTTTCGGAGGAAGGTCACAACAATATGCTCGTTAAACCAAAGTTAAAG
TTGAGTAAGAAAAGTTGGCGGATTACTGGGCCAGATCAAGACGGATTGCG
CTGCGATGAAGTTGCCACCATAAATAATGGTGTCCAGGTGCAGGAGCAAC
AGCAGCAGCAGGAGCGGCAGCAGCTGGGGCATGAGAAGTCAGCAAGCAGC
GAGAGCGAGTATCAAAATTATCATTGCCCAACTGGGAAATCATGCAGCAG
CCACAGTTACCAACTTGGCCAGCCAGTGGCCAACAAATTGTCAACAGTCG
CGATGCAGGCGCTGGCGGTGGTTGAGAACTCGGGAGGTGCATCCTTATCA
GCGGGGAGCCATAAACAGGCGCCGGCAGCCGGAGTAAATCAGGAGCTGCC
ACTGGAGGCGGGGTCAATAGGTCGGCGGGAATGGCAGTTGTTGCGACATT
TGAGCGGCGACCACCGGCTGGCAGTGTTGCAAATCTACGGCACGTTCGGC
GAACGCTTGCACGTCCGCCCCCAGCTGCCCCTGGAGGGCGTGGCCTGCCT
GCGGCTGAGCGAGGAGTCCTCCACTTTTGGCCACGTCAGAGTGCACACAT
TTTTCTTGGCTGTCATTGCGATCGGCGGCGGCGATGAGCACGCCGTCTTC
CTGTGGCACCTAGACCACCTGCCACATGGACCCACTTTCGAGACTGTCAT
CGAGACTCCGGGCCACCGATTCCTGGGACCTGCTCACTCGCTCCGGTGCA
GCTGGCCGGAGATTAGGGCATCCGGCCAGTTCCTCACCCTCCGCAATCTG
GCTGCCAAGTGCGAGGTGACCATCAAAAGCAGGTAGACCCCATCATGCAC
CCAAGACTGGTCCCAAAACATAGGTATTCTAAGCTAATTAGCAGGTAGTA
ATCGTGTTTAAGAGCTTTGAGGCAAGTTTAAGAACTGATGGCTGCGAAAG
CGGCGATAGAGCAAACCAAAATGCAATGAACATAAAATAAGAATAAAATG
TGAAATGTATGCTTTGTAAATTATATTTGCATTTTTTCCATCGACCGCGT
ATTTATACGAAAAATGCAAAACGCAATTTGGAAATGTGTTTAATTTGCAA
TATTTTTAATTAATAAAAACATTTAGAAATGTGCTGGCCTGGCAGTTTGA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

IP10471.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG34375-RA 2243 CG34375-RA 220..2221 1..2002 10010 100 Plus
CG34375-RB 2269 CG34375-RB 243..2247 1..2002 9955 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18823536..18824979 1999..556 7220 100 Minus
chr3R 27901430 chr3R 18831389..18831685 297..1 1485 100 Minus
chr3R 27901430 chr3R 18826238..18826412 557..383 875 100 Minus
chr3R 27901430 chr3R 18829980..18830069 386..297 450 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23000136..23001582 2002..556 7235 100 Minus
3R 32079331 3R 23008002..23008298 297..1 1485 100 Minus
3R 32079331 3R 23002841..23003015 557..383 875 100 Minus
3R 32079331 3R 23006593..23006682 386..297 450 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22740967..22742413 2002..556 7235 100 Minus
3R 31820162 3R 22748833..22749129 297..1 1485 100 Minus
3R 31820162 3R 22743672..22743846 557..383 875 100 Minus
3R 31820162 3R 22747424..22747513 386..297 450 100 Minus
Blast to na_te.dros performed 2019-03-15 23:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 661..722 803..744 125 71.4 Minus
Rt1c 5443 Rt1c RT1C 5443bp 4290..4374 721..801 119 62.4 Plus

IP10471.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:13:31 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18829982..18830068 298..384 100 <- Minus
chr3R 18823536..18824978 557..1999 100 <- Minus
chr3R 18826239..18826410 385..556 100 <- Minus
chr3R 18831389..18831685 1..297 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:07 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 19..1704 1..1686 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:27:22 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 19..1704 1..1686 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:39 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 19..1704 1..1686 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:50:23 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 19..1704 1..1686 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:06 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 19..1704 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:58:03 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 220..2218 1..1999 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:27:22 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 220..2218 1..1999 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:39 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 220..2218 1..1999 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:50:24 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 220..2218 1..1999 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:06 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34375-RA 220..2218 1..1999 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:31 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23000139..23001581 557..1999 100 <- Minus
3R 23002842..23003013 385..556 100 <- Minus
3R 23006595..23006681 298..384 100 <- Minus
3R 23008002..23008298 1..297 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:31 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23000139..23001581 557..1999 100 <- Minus
3R 23002842..23003013 385..556 100 <- Minus
3R 23006595..23006681 298..384 100 <- Minus
3R 23008002..23008298 1..297 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:31 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23000139..23001581 557..1999 100 <- Minus
3R 23002842..23003013 385..556 100 <- Minus
3R 23006595..23006681 298..384 100 <- Minus
3R 23008002..23008298 1..297 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:39 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18825861..18827303 557..1999 100 <- Minus
arm_3R 18828564..18828735 385..556 100 <- Minus
arm_3R 18832317..18832403 298..384 100 <- Minus
arm_3R 18833724..18834020 1..297 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:53:58 Download gff for IP10471.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22740970..22742412 557..1999 100 <- Minus
3R 22743673..22743844 385..556 100 <- Minus
3R 22747426..22747512 298..384 100 <- Minus
3R 22748833..22749129 1..297 100   Minus

IP10471.hyp Sequence

Translation from 0 to 1685

> IP10471.hyp
IYACANGTLGLNLSRAPWDPYPWVSGVQAKSSAERGGVRLGDTLLELNGA
DVLGLKISELANRLQDHWQSGAEVVTLMMWRQQANIDPNEDPAEASHAVH
GINQQSLQKFATCLQHISQLLECPVCLEVIKPPGWQCCNGHVLCNNCRSR
SVKCPVCRVPLGPRGRCLLSDKLFTLLAESFPCDGGKTNKVAASQGHGKL
SSVNKCTNEYHNQPKMALAKTSSGKSKCGKQISRQLETVLVDQSPREIRR
KSQQGQEQEQAVQEAVLPRCTLIKVQHQEAAVEHFSEEGHNNMLVKPKLK
LSKKSWRITGPDQDGLRCDEVATINNGVQVQEQQQQQERQQLGHEKSASS
ESEYQNYHCPTGKSCSSHSYQLGQPVANKLSTVAMQALAVVENSGGASLS
AGSHKQAPAAGVNQELPLEAGSIGRREWQLLRHLSGDHRLAVLQIYGTFG
ERLHVRPQLPLEGVACLRLSEESSTFGHVRVHTFFLAVIAIGGGDEHAVF
LWHLDHLPHGPTFETVIETPGHRFLGPAHSLRCSWPEIRASGQFLTLRNL
AAKCEVTIKSR*

IP10471.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:27:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG34375-PA 567 CG34375-PA 7..567 1..561 2977 100 Plus
CG34375-PC 568 CG34375-PC 7..568 1..561 2965 99.8 Plus
CG34375-PB 568 CG34375-PB 7..568 1..561 2965 99.8 Plus
CG6688-PA 424 CG6688-PA 40..201 10..181 334 40.7 Plus

IP10471.pep Sequence

Translation from 231 to 1685

> IP10471.pep
MMWRQQANIDPNEDPAEASHAVHGINQQSLQKFATCLQHISQLLECPVCL
EVIKPPGWQCCNGHVLCNNCRSRSVKCPVCRVPLGPRGRCLLSDKLFTLL
AESFPCDGGKTNKVAASQGHGKLSSVNKCTNEYHNQPKMALAKTSSGKSK
CGKQISRQLETVLVDQSPREIRRKSQQGQEQEQAVQEAVLPRCTLIKVQH
QEAAVEHFSEEGHNNMLVKPKLKLSKKSWRITGPDQDGLRCDEVATINNG
VQVQEQQQQQERQQLGHEKSASSESEYQNYHCPTGKSCSSHSYQLGQPVA
NKLSTVAMQALAVVENSGGASLSAGSHKQAPAAGVNQELPLEAGSIGRRE
WQLLRHLSGDHRLAVLQIYGTFGERLHVRPQLPLEGVACLRLSEESSTFG
HVRVHTFFLAVIAIGGGDEHAVFLWHLDHLPHGPTFETVIETPGHRFLGP
AHSLRCSWPEIRASGQFLTLRNLAAKCEVTIKSR*

IP10471.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:44:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19939-PA 379 GF19939-PA 1..375 139..484 666 50.9 Plus
Dana\GF18277-PA 167 GF18277-PA 85..164 2..110 373 67.9 Plus
Dana\GF16720-PA 474 GF16720-PA 140..214 29..104 179 47.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12473-PA 342 GG12473-PA 1..342 139..484 1370 85.7 Plus
Dere\GG12471-PA 165 GG12471-PA 84..164 1..110 406 71.8 Plus
Dere\GG11176-PA 427 GG11176-PA 130..204 29..104 191 48.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18245-PA 465 GH18245-PA 83..253 1..164 606 67.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG34375-PA 567 CG34375-PA 84..567 1..484 2574 100 Plus
CG34375-PC 568 CG34375-PC 84..568 1..484 2562 99.8 Plus
CG34375-PB 568 CG34375-PB 84..568 1..484 2562 99.8 Plus
CG6688-PA 424 CG6688-PA 127..201 29..104 192 48.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10770-PA 90 GI10770-PA 1..88 29..116 422 87.5 Plus
Dmoj\GI10772-PA 361 GI10772-PA 88..342 211..469 411 43.9 Plus
Dmoj\GI22002-PA 290 GI22002-PA 132..255 29..157 158 32.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27362-PA 431 GL27362-PA 1..419 139..484 663 49.2 Plus
Dper\GL20581-PA 150 GL20581-PA 1..85 29..113 448 95.3 Plus
Dper\GL27120-PA 501 GL27120-PA 132..206 29..104 186 46.1 Plus
Dper\GL20853-PA 340 GL20853-PA 87..133 38..84 151 53.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30099-PA 594 GA30099-PA 84..582 1..484 1286 61.2 Plus
Dpse\GA19782-PA 500 GA19782-PA 132..206 29..104 186 46.1 Plus
Dpse\GA11985-PA 340 GA11985-PA 87..133 38..84 151 53.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23603-PA 352 GM23603-PA 1..352 139..484 1520 91.5 Plus
Dsec\GM26478-PA 451 GM26478-PA 129..203 29..104 190 48.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18417-PA 333 GD18417-PA 1..326 139..454 1396 92.3 Plus
Dsim\GD20994-PA 424 GD20994-PA 127..201 29..104 191 48.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14369-PA 378 GJ14369-PA 1..359 139..469 484 42.2 Plus
Dvir\GJ14368-PA 241 GJ14368-PA 83..194 1..110 479 79.5 Plus
Dvir\GJ14356-PA 252 GJ14356-PA 133..207 29..104 161 40.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19199-PA 402 GK19199-PA 3..401 139..484 484 39.4 Plus
Dwil\GK11612-PA 96 GK11612-PA 1..83 29..111 441 96.4 Plus
Dwil\GK11484-PA 642 GK11484-PA 134..208 29..104 179 42.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23997-PA 348 GE23997-PA 1..348 139..484 1443 86.2 Plus
Dyak\GE23996-PA 209 GE23996-PA 84..209 1..126 593 89 Plus
Dyak\GE10344-PA 432 GE10344-PA 127..201 29..104 191 48.7 Plus