Clone IP10506 Report

Search the DGRC for IP10506

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:105
Well:6
Vector:pOT2
Associated Gene/TranscriptCG10352-RA
Protein status:IP10506.pep: wuzgold
Preliminary Size:963
Sequenced Size:1273

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10352 2005-01-01 Successful iPCR screen
CG10352 2008-04-29 Release 5.5 accounting
CG10352 2008-08-15 Release 5.9 accounting
CG10352 2008-12-18 5.12 accounting

Clone Sequence Records

IP10506.complete Sequence

1273 bp (1273 high quality bases) assembled on 2006-04-05

GenBank Submission: BT025110

> IP10506.complete
CGATGAGTTCTTTGACTCATTCGATTTGGTTTTCTGCGATTGCGATGGCA
AGTTTGTTTCATTTGTACCTACACTATATATGGTCATATGTGGGTCTTGT
ACCGCCAGGTGTTGTTTGGTATCCACTGAGGGATTTCATACCCGGTTCCG
CCGAGGCATTGGCCCATTTGGCCCATCTTGGCAAGGATGTGACCTTCGTG
ACCAACAACAGCATCAGTTCGGTGAAGGAGCACATCGAGAAGTTTGAGAA
ACAGGGCCATCTAAAGATTGATGAGCATCAAATCGTTCATCCTGCCCAAA
CCATCTGCGATCACTTGAGGTCCATTAAATTCGAGGGACTCATCTACTGC
CTGGCCACGTCGCCATTTAAGGAAATCCTCGTAAATGCCGGATTTCGTTT
GGCCCAAGAGAATGGTTCGGGAATCATCACGAGGCTGAAGGATCTGCACG
AGGCCATCTTCTCTGGCGAATCGGTGGATGCGGTCATCATCGACGTTGAC
TTCAACCTGTCGGCGGCCAAGTTGATGCGTGCCCATTTCCAGCTACAGAA
TCCGAAGTGCCTTTTCCTCGCCGGAGCTGCCGATGCTTTGATTCCATTTG
GCAAGGGTGAAATCATAGGACCTGGAGCCTTTATCGACGTGGTGACCCAG
GCCGTTGGCCGTCAGCCCATAACCTTGGGCAAACCGGGCGAGGATCTGCG
CAAGCTTCTACTGGAACGCCATCGGGAAATTCCGCCCAGCCGCGTGCTCT
TCGTGGGCGATAGCCTGGCCAGCGATATTGGATTCGCTCGCGCCAGTGGC
TACCAGACGCTCCTCGTCCTTACCGGCGGCACAAAGCTGGAGGATGTCCA
GCGACTGCCGATTGACCATTCCCAGATGCCCGACTATCTGGCCGATTGCC
TGGGCCAGATAGCAATCAATAATAATCCGGCATCGAGTAACTCTGACTCG
GCGCATTCGGTGTGATGATAGTGTTCAAGTATTTGTCAATCTTATCTGCT
GATTTTTAACCAAGTTTGTTTGTTGGTAATAGGCGGAAACCCAAAGTGAC
TCCGATTACTCACTGCACAATGTGTTCCTTGACTTTGGAAGTGAGGAATA
CCCTATAATCTAGACATTATCTACTATAATTAGTGCAAAAGTTTCAATTA
ACTTGCATCTCTTTTTTGTTTTTTAAAAGGCATTAAATCTATATTTTTTT
TGGCGAAATTTATAAATAAAACTAAACTTTTTATTTGTTCACAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA

IP10506.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG10352.a 1387 CG10352.a 253..1387 108..1242 5675 100 Plus
CG10352.b 1119 CG10352.b 1..1119 3..1121 5595 100 Plus
CG10352-RA 963 CG10352-RA 1..963 3..965 4815 100 Plus
CG10352.a 1387 CG10352.a 207..254 1..48 240 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:22:54
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11766435..11767059 1242..617 3020 99.2 Minus
chrX 22417052 chrX 11767577..11767851 275..1 1375 100 Minus
chrX 22417052 chrX 11767119..11767329 619..409 1040 99.5 Minus
chrX 22417052 chrX 11767384..11767520 410..274 670 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:22:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11875304..11875931 1244..617 3140 100 Minus
X 23542271 X 11876449..11876723 275..1 1375 100 Minus
X 23542271 X 11875991..11876201 619..409 1055 100 Minus
X 23542271 X 11876256..11876392 410..274 685 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:23:41
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 11883402..11884029 1244..617 3140 100 Minus
X 23527363 X 11884547..11884821 275..1 1375 100 Minus
X 23527363 X 11884089..11884299 619..409 1055 100 Minus
X 23527363 X 11884354..11884490 410..274 685 100 Minus
Blast to na_te.dros performed 2019-03-15 17:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy10 6006 gypsy10 GYPSY10 6006bp 756..859 1239..1135 126 59 Minus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 976..1093 1088..1197 112 61.7 Plus

IP10506.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:24:10 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11766435..11767057 619..1242 99 <- Minus
chrX 11767120..11767327 411..618 99 <- Minus
chrX 11767384..11767518 276..410 99 <- Minus
chrX 11767577..11767851 1..275 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:10 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RA 1..963 3..965 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:56:45 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RA 1..963 3..965 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:33:44 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RB 86..948 104..965 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:37:32 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RA 1..963 3..965 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:35:18 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RB 86..948 104..965 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:35:24 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RA 1..963 3..965 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:56:45 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RA 99..1340 1..1242 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:33:44 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RB 357..1491 108..1242 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:37:32 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RA 1..963 3..965 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:35:18 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
CG10352-RB 357..1491 108..1242 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:24:10 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
X 11875306..11875929 619..1242 100 <- Minus
X 11875992..11876199 411..618 100 <- Minus
X 11876256..11876390 276..410 100 <- Minus
X 11876449..11876723 1..275 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:24:10 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
X 11875306..11875929 619..1242 100 <- Minus
X 11875992..11876199 411..618 100 <- Minus
X 11876256..11876390 276..410 100 <- Minus
X 11876449..11876723 1..275 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:24:10 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
X 11875306..11875929 619..1242 100 <- Minus
X 11875992..11876199 411..618 100 <- Minus
X 11876256..11876390 276..410 100 <- Minus
X 11876449..11876723 1..275 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:33:44 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11770289..11770423 276..410 100 <- Minus
arm_X 11770482..11770756 1..275 100   Minus
arm_X 11769339..11769962 619..1242 100 <- Minus
arm_X 11770025..11770232 411..618 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:16:08 Download gff for IP10506.complete
Subject Subject Range Query Range Percent Splice Strand
X 11883404..11884027 619..1242 100 <- Minus
X 11884090..11884297 411..618 100 <- Minus
X 11884354..11884488 276..410 100 <- Minus
X 11884547..11884821 1..275 100   Minus

IP10506.hyp Sequence

Translation from 2 to 964

> IP10506.hyp
MSSLTHSIWFSAIAMASLFHLYLHYIWSYVGLVPPGVVWYPLRDFIPGSA
EALAHLAHLGKDVTFVTNNSISSVKEHIEKFEKQGHLKIDEHQIVHPAQT
ICDHLRSIKFEGLIYCLATSPFKEILVNAGFRLAQENGSGIITRLKDLHE
AIFSGESVDAVIIDVDFNLSAAKLMRAHFQLQNPKCLFLAGAADALIPFG
KGEIIGPGAFIDVVTQAVGRQPITLGKPGEDLRKLLLERHREIPPSRVLF
VGDSLASDIGFARASGYQTLLVLTGGTKLEDVQRLPIDHSQMPDYLADCL
GQIAINNNPASSNSDSAHSV*

IP10506.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG10352-PB 315 CG10352-PB 31..315 36..320 1464 100 Plus
CG15739-PB 308 CG15739-PB 31..297 36..304 590 45.6 Plus
CG15739-PA 308 CG15739-PA 31..297 36..304 590 45.6 Plus
CG2680-PB 305 CG2680-PB 31..293 36..300 315 34.2 Plus
CG5567-PA 330 CG5567-PA 48..318 36..303 258 27.5 Plus

IP10506.pep Sequence

Translation from 2 to 964

> IP10506.pep
MSSLTHSIWFSAIAMASLFHLYLHYIWSYVGLVPPGVVWYPLRDFIPGSA
EALAHLAHLGKDVTFVTNNSISSVKEHIEKFEKQGHLKIDEHQIVHPAQT
ICDHLRSIKFEGLIYCLATSPFKEILVNAGFRLAQENGSGIITRLKDLHE
AIFSGESVDAVIIDVDFNLSAAKLMRAHFQLQNPKCLFLAGAADALIPFG
KGEIIGPGAFIDVVTQAVGRQPITLGKPGEDLRKLLLERHREIPPSRVLF
VGDSLASDIGFARASGYQTLLVLTGGTKLEDVQRLPIDHSQMPDYLADCL
GQIAINNNPASSNSDSAHSV*

IP10506.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:40:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21591-PA 273 GF21591-PA 1..271 33..304 1078 75.4 Plus
Dana\GF21574-PA 310 GF21574-PA 33..299 36..304 664 48.9 Plus
Dana\GF22487-PA 305 GF22487-PA 31..294 36..301 336 32.5 Plus
Dana\GF25232-PA 316 GF25232-PA 33..303 36..303 282 29.6 Plus
Dana\GF10231-PA 308 GF10231-PA 33..278 36..283 216 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18824-PA 305 GG18824-PA 17..304 31..319 1360 89.3 Plus
Dere\GG18450-PA 308 GG18450-PA 31..297 36..304 588 45.9 Plus
Dere\GG18612-PA 305 GG18612-PA 31..294 36..301 319 34.1 Plus
Dere\GG15774-PA 315 GG15774-PA 33..303 36..303 273 27.9 Plus
Dere\GG22174-PA 314 GG22174-PA 33..285 36..291 252 29.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12470-PA 265 GH12470-PA 1..263 42..304 998 71.1 Plus
Dgri\GH12276-PA 311 GH12276-PA 34..296 38..301 561 43.1 Plus
Dgri\GH11944-PA 305 GH11944-PA 31..295 36..301 331 33 Plus
Dgri\GH14463-PA 316 GH14463-PA 33..303 36..303 273 29.2 Plus
Dgri\GH14574-PA 319 GH14574-PA 39..301 36..294 269 31.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10352-PB 315 CG10352-PB 31..315 36..320 1464 100 Plus
CG15739-PB 308 CG15739-PB 31..297 36..304 590 45.6 Plus
CG15739-PA 308 CG15739-PA 31..297 36..304 590 45.6 Plus
CG2680-PB 305 CG2680-PB 31..293 36..300 315 34.2 Plus
CG5567-PA 330 CG5567-PA 48..318 36..303 258 27.5 Plus
CG11291-PA 308 CG11291-PA 33..279 36..285 252 31.2 Plus
CG32487-PA 320 CG32487-PA 40..302 36..294 237 27.4 Plus
CG32488-PB 307 CG32488-PB 33..302 36..303 218 26.7 Plus
CG32488-PA 307 CG32488-PA 33..302 36..303 218 26.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:40:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11147-PA 305 GI11147-PA 33..305 36..308 1012 68.9 Plus
Dmoj\GI11145-PA 1237 GI11145-PA 965..1237 36..308 1002 68.1 Plus
Dmoj\GI10972-PA 323 GI10972-PA 46..307 38..300 586 46.6 Plus
Dmoj\GI14731-PA 303 GI14731-PA 30..293 36..301 322 33.1 Plus
Dmoj\GI13608-PA 316 GI13608-PA 33..303 36..303 291 30 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20404-PA 302 GL20404-PA 31..298 36..303 1122 76.5 Plus
Dper\GL20155-PA 312 GL20155-PA 34..301 36..304 593 45.8 Plus
Dper\GL19811-PA 305 GL19811-PA 31..294 36..301 333 32.8 Plus
Dper\GL18197-PA 321 GL18197-PA 41..303 36..294 260 30.1 Plus
Dper\GL13742-PA 308 GL13742-PA 33..303 36..303 257 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29193-PA 357 GA29193-PA 86..353 36..303 1135 77.2 Plus
Dpse\GA13927-PA 312 GA13927-PA 34..301 36..304 596 46.1 Plus
Dpse\GA15426-PA 305 GA15426-PA 31..294 36..301 331 32.8 Plus
Dpse\GA16942-PA 308 GA16942-PA 33..303 36..303 262 31.1 Plus
Dpse\GA16941-PA 321 GA16941-PA 41..303 36..294 258 30.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:40:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13035-PA 300 GM13035-PA 1..300 1..320 1480 89.7 Plus
Dsec\GM13036-PA 286 GM13036-PA 4..286 37..320 1428 95.4 Plus
Dsec\GM13116-PA 308 GM13116-PA 31..297 36..304 596 44.8 Plus
Dsec\GM18860-PA 305 GM18860-PA 31..294 36..301 315 33.7 Plus
Dsec\GM24299-PA 315 GM24299-PA 33..303 36..303 273 27.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:40:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15960-PA 305 GD15960-PA 22..305 36..320 1428 95.1 Plus
Dsim\GD17054-PA 300 GD17054-PA 23..289 36..304 595 44.8 Plus
Dsim\GD16358-PA 305 GD16358-PA 31..294 36..301 311 32.1 Plus
Dsim\GD12368-PA 315 GD12368-PA 33..303 36..303 273 27.9 Plus
Dsim\GD11653-PA 308 GD11653-PA 33..279 36..285 252 30 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:40:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18523-PA 278 GJ18523-PA 8..276 36..304 1001 69.5 Plus
Dvir\GJ18530-PA 311 GJ18530-PA 34..296 38..301 601 46.4 Plus
Dvir\GJ18537-PA 304 GJ18537-PA 30..293 36..301 348 33.8 Plus
Dvir\GJ13944-PA 316 GJ13944-PA 33..303 36..303 294 29.2 Plus
Dvir\GJ11756-PA 321 GJ11756-PA 41..303 36..294 292 33.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:40:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25422-PA 335 GK25422-PA 57..335 36..308 953 63.8 Plus
Dwil\GK25499-PA 314 GK25499-PA 36..301 36..303 634 49.1 Plus
Dwil\GK20059-PA 305 GK20059-PA 31..295 36..301 323 33.1 Plus
Dwil\GK20804-PA 298 GK20804-PA 33..297 36..297 276 30.6 Plus
Dwil\GK21181-PA 318 GK21181-PA 35..305 36..303 266 27.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:40:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17588-PA 305 GE17588-PA 22..305 36..320 1350 90.2 Plus
Dyak\GE15672-PA 308 GE15672-PA 31..297 36..304 590 45.6 Plus
Dyak\GE16927-PA 305 GE16927-PA 31..294 36..301 306 33.3 Plus
Dyak\GE22109-PA 315 GE22109-PA 33..303 36..303 271 27.9 Plus
Dyak\GE14167-PA 311 GE14167-PA 33..285 36..291 257 29.3 Plus