Clone IP10617 Report

Search the DGRC for IP10617

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:106
Well:17
Vector:pOT2
Associated Gene/TranscriptCG10996-RA
Protein status:IP10617.pep: gold
Preliminary Size:1245
Sequenced Size:1273

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10996 2005-01-01 Successful iPCR screen
CG10996 2008-04-29 Release 5.5 accounting
CG10996 2008-08-15 Release 5.9 accounting
CG10996 2008-12-18 5.12 accounting

Clone Sequence Records

IP10617.complete Sequence

1273 bp (1273 high quality bases) assembled on 2006-01-20

GenBank Submission: BT024330

> IP10617.complete
AAAAGGTTTATCCCTAATTATGGTTAAGGTTGTGGAGGACATCTTTGGTA
TTGCGACCAATCCGTTTACCAAACAGGCCCAAGTGATTCGTCGCTACACG
ATGACCAACACCAATCGCCTGTCCGTGGCCATCATCCAGCTGGGCGCAAC
AATCCAGAGCATTCAAGTGCCAGATGCCTATCACCAGTTGTCCGATGTGG
TCCTCGGATTCGATGATGTTGCCGGGTATACGAAATATAGAAATTATCAT
TTTGGTTGCACGATTGGCAGAGTCTCGGATGTGGTGGGCAACGGCGAGTT
CATCATGGACGAGCGACGTGTCGTTGTATCCAAAAATCTCGGCCAGAAAC
ACCAAACTAATGGTGGCTTTGTGGGCTTCGATCAGGTCATTTGGGATCTG
GAAATGAAACGACCGGATGGCGTCACCTTGCGTCATATATCCCCGGATGG
ACACGAAGGTTATCCTGGGACCTTGAAAGTATTACTTCACTTCACCATAA
ATGACGACAATCGTTTTTTTATACAAATTGAAGCTACCACTAATCAAACG
ACGCCGGTAAATATATCCAATCATATCATCTTTAATCTGGCTGGCCAGTC
TACCGGAATCAAGGGCATTTTTGACCATCAAATCAATATTGAGGCAATAG
AAACGATGGAAACATCAAATGGCGACGGACTTCCCACGGGTCGATTTAAG
AACGTTAATGATTCCGTATACGATATCCGATTGCCAGTATTCATGGGCGA
CCGAGTGCGTCAGTTTGAAAAGAAACCGGTAAAGGGTTACGATGTTTGCT
TTGCTCTCGACAAGGAGTTTGATGCAATTAGAACGCGTTATGTGGGCAGA
TTTTTGCATCCGGATTCGGGCAGATTTATGGAAATATTCAGCAATCAGCC
GTGTGTTAAATTCACCACCGGCAATTGTTTTCCCCAGGAACCGCTTGGTG
AGCCACCAATATTGGGTAAAAAGTGCACCCGCTATTGGCAACATTGTGGC
TTTAGTCTTCAGCTACTTAACTATCCGGATGCCGTAAATCAGCCGGATTT
TCCACGCATCTTCATCAATCCGGGCGAGCATTATTTCCATGAAACCATCT
ACCATTTTGGCGTTCAGGAATCGTGGAAATGCTGTGCCGATCCGGAGGAA
CTGGAAGCCCTGGGCGAAGAACCACTGCGGAAACCAAAGGCCGTTTGAAA
AGCGCAGAGAAGGGCCCTTGAATGGCCGCTACTTATGTAGGCCGTTTGAG
AAAAAAAAAAAAAAAAAAAAAAA

IP10617.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG10996-RA 1250 CG10996-RA 1..1250 1..1250 6235 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13687118..13688367 1250..1 6235 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13796387..13797638 1252..1 6245 99.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13804485..13805736 1252..1 6245 99.9 Minus
Blast to na_te.dros performed on 2019-03-15 19:33:56 has no hits.

IP10617.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:34:49 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13687118..13688367 1..1250 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:31 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1179 20..1198 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:37:37 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1179 20..1198 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:54:10 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1179 20..1198 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:12:31 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1179 20..1198 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:20:44 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1179 20..1198 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:09:23 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1250 1..1250 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:37:37 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1250 1..1250 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:54:10 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1250 1..1250 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:12:32 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1250 1..1250 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:20:44 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
CG10996-RA 1..1250 1..1250 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:49 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
X 13796389..13797638 1..1250 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:49 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
X 13796389..13797638 1..1250 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:49 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
X 13796389..13797638 1..1250 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:54:10 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13690422..13691671 1..1250 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:46 Download gff for IP10617.complete
Subject Subject Range Query Range Percent Splice Strand
X 13804487..13805736 1..1250 99   Minus

IP10617.hyp Sequence

Translation from 0 to 1197

> IP10617.hyp
KGLSLIMVKVVEDIFGIATNPFTKQAQVIRRYTMTNTNRLSVAIIQLGAT
IQSIQVPDAYHQLSDVVLGFDDVAGYTKYRNYHFGCTIGRVSDVVGNGEF
IMDERRVVVSKNLGQKHQTNGGFVGFDQVIWDLEMKRPDGVTLRHISPDG
HEGYPGTLKVLLHFTINDDNRFFIQIEATTNQTTPVNISNHIIFNLAGQS
TGIKGIFDHQINIEAIETMETSNGDGLPTGRFKNVNDSVYDIRLPVFMGD
RVRQFEKKPVKGYDVCFALDKEFDAIRTRYVGRFLHPDSGRFMEIFSNQP
CVKFTTGNCFPQEPLGEPPILGKKCTRYWQHCGFSLQLLNYPDAVNQPDF
PRIFINPGEHYFHETIYHFGVQESWKCCADPEELEALGEEPLRKPKAV*

IP10617.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10996-PA 392 CG10996-PA 1..392 7..398 2114 100 Plus
CG32444-PA 370 CG32444-PA 3..367 8..380 908 43.4 Plus
CG32445-PA 367 CG32445-PA 1..361 7..370 840 45.3 Plus
CG10467-PA 364 CG10467-PA 1..362 7..371 837 46.2 Plus
CG4988-PA 368 CG4988-PA 3..365 8..378 825 42.6 Plus

IP10617.pep Sequence

Translation from 19 to 1197

> IP10617.pep
MVKVVEDIFGIATNPFTKQAQVIRRYTMTNTNRLSVAIIQLGATIQSIQV
PDAYHQLSDVVLGFDDVAGYTKYRNYHFGCTIGRVSDVVGNGEFIMDERR
VVVSKNLGQKHQTNGGFVGFDQVIWDLEMKRPDGVTLRHISPDGHEGYPG
TLKVLLHFTINDDNRFFIQIEATTNQTTPVNISNHIIFNLAGQSTGIKGI
FDHQINIEAIETMETSNGDGLPTGRFKNVNDSVYDIRLPVFMGDRVRQFE
KKPVKGYDVCFALDKEFDAIRTRYVGRFLHPDSGRFMEIFSNQPCVKFTT
GNCFPQEPLGEPPILGKKCTRYWQHCGFSLQLLNYPDAVNQPDFPRIFIN
PGEHYFHETIYHFGVQESWKCCADPEELEALGEEPLRKPKAV*

IP10617.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19091-PA 388 GF19091-PA 1..387 1..387 1680 79.1 Plus
Dana\GF25157-PA 377 GF25157-PA 3..374 2..374 996 45.8 Plus
Dana\GF25159-PA 367 GF25159-PA 1..361 1..364 838 45.3 Plus
Dana\GF10927-PA 364 GF10927-PA 1..362 1..365 831 45.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19484-PA 391 GG19484-PA 1..391 1..391 2001 93.1 Plus
Dere\GG16211-PA 374 GG16211-PA 3..367 2..374 934 44 Plus
Dere\GG23731-PA 368 GG23731-PA 3..365 2..372 832 41.8 Plus
Dere\GG16212-PA 367 GG16212-PA 1..362 1..365 830 44.7 Plus
Dere\GG14088-PA 364 GG14088-PA 1..363 1..366 814 44.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11905-PA 389 GH11905-PA 1..387 1..387 1336 62.1 Plus
Dgri\GH16361-PA 375 GH16361-PA 3..373 2..374 1049 48.8 Plus
Dgri\GH16364-PA 367 GH16364-PA 1..362 1..365 840 43 Plus
Dgri\GH15657-PA 364 GH15657-PA 1..363 1..366 808 43.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10996-PA 392 CG10996-PA 1..392 1..392 2114 100 Plus
CG32444-PA 370 CG32444-PA 3..367 2..374 908 43.4 Plus
CG32445-PA 367 CG32445-PA 1..361 1..364 840 45.3 Plus
CG10467-PA 364 CG10467-PA 1..362 1..365 837 46.2 Plus
CG4988-PA 368 CG4988-PA 3..365 2..372 825 42.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21479-PA 388 GI21479-PA 1..386 1..387 1343 62 Plus
Dmoj\GI11552-PA 377 GI11552-PA 3..375 2..374 994 47.1 Plus
Dmoj\GI11556-PA 367 GI11556-PA 1..362 1..365 842 43.8 Plus
Dmoj\GI12703-PA 363 GI12703-PA 1..362 1..366 800 44 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20398-PA 390 GL20398-PA 1..388 1..387 1386 63.9 Plus
Dper\GL24849-PA 376 GL24849-PA 3..374 2..374 1006 46.9 Plus
Dper\GL15523-PA 365 GL15523-PA 1..342 1..345 800 46.4 Plus
Dper\GL24851-PA 369 GL24851-PA 1..364 1..365 686 40 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29171-PA 390 GA29171-PA 1..388 1..387 1379 64.2 Plus
Dpse\GA16909-PA 376 GA16909-PA 3..374 2..374 1006 46.9 Plus
Dpse\GA10332-PA 364 GA10332-PA 1..364 1..367 847 46.6 Plus
Dpse\GA16910-PA 367 GA16910-PA 1..362 1..365 827 44.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17584-PA 392 GM17584-PA 1..392 1..392 2072 97.2 Plus
Dsec\GM22392-PA 370 GM22392-PA 3..367 2..374 930 43.7 Plus
Dsec\GM22394-PA 367 GM22394-PA 1..361 1..364 849 45.3 Plus
Dsec\GM19161-PA 368 GM19161-PA 3..365 2..372 844 43.1 Plus
Dsec\GM13871-PA 364 GM13871-PA 1..363 1..366 822 45 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15872-PA 411 GD15872-PA 1..369 1..367 1850 93.2 Plus
Dsim\GD14982-PA 370 GD14982-PA 3..367 2..374 929 43.7 Plus
Dsim\GD14983-PA 367 GD14983-PA 1..361 1..364 848 45.3 Plus
Dsim\GD23786-PA 368 GD23786-PA 3..365 2..372 839 42.9 Plus
Dsim\GD13155-PA 364 GD13155-PA 1..363 1..366 835 45.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18510-PA 388 GJ18510-PA 1..386 1..387 1379 64.6 Plus
Dvir\GJ11231-PA 377 GJ11231-PA 3..375 2..374 1043 48.8 Plus
Dvir\GJ11129-PA 367 GJ11129-PA 1..362 1..365 836 44.4 Plus
Dvir\GJ11234-PA 367 GJ11234-PA 1..362 1..365 836 44.4 Plus
Dvir\GJ12686-PA 363 GJ12686-PA 1..362 1..366 833 44.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:21:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25047-PA 393 GK25047-PA 1..389 1..387 1386 63.3 Plus
Dwil\GK17132-PA 376 GK17132-PA 3..375 2..374 1006 47.6 Plus
Dwil\GK17052-PA 367 GK17052-PA 1..362 1..365 830 43.6 Plus
Dwil\GK16927-PA 367 GK16927-PA 1..362 1..365 819 45.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:21:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16137-PA 392 GE16137-PA 1..392 1..391 1992 94.1 Plus
Dyak\GE23041-PA 370 GE23041-PA 3..367 2..374 933 44.5 Plus
Dyak\GE19780-PA 370 GE19780-PA 3..367 2..374 933 44.5 Plus
Dyak\GE18537-PA 368 GE18537-PA 3..365 2..372 864 43.4 Plus
Dyak\GE20511-PA 364 GE20511-PA 1..363 1..366 832 45.5 Plus