Clone IP10641 Report

Search the DGRC for IP10641

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:106
Well:41
Vector:pOT2
Associated Gene/TranscriptCG12947-RB
Protein status:IP10641.pep: wuzgold
Preliminary Size:1005
Sequenced Size:1829

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12947 2005-01-01 Successful iPCR screen
CG12947 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

IP10641.complete Sequence

1829 bp assembled on 2011-09-06

GenBank Submission: BT128876.1

> IP10641.complete
AAACAACGTAGTCGCGCTTGCCTAACCAAGATGTGTGATTAGTAGTGAGT
GTGTGATATAAACTGTAGTGATTCCAACGAAAGGTCAGTGGCTCATCGAC
CACTCAAGTGATCCCCACTCGCAATGAGATTGATCTGGCTGCAGCTCCTG
GCTGCTGGGGTTGCTCTCTATCTGGCAAACGGTTGTGCAACGGCCGCCAA
GGCATCCACAAGCCGCGGAGTTGCACAATACAAGCTCCCGCTCCCTGCTC
CATTGCCAGACCACGAATCTGTCGCGGTTTCAGGCGCGGATCAGGCTAGG
CGACAGCAGCAGCAGCAGCAGAAGGGAGCATCCAACCAGCGAAGGCGCAC
TCAGGTCGTGCGGCGGCGCAGGCCCTCCTCTACAACAACTACTTCATCCA
CCTCAACCACAACGACAACCACATCGACAACAACTACAACGACGACAACA
ACAACTCCGCGTCCCAGCCTGGCCAACGGCTTCAACTTCTTTAATCGGAA
CTTCTGGAGTTTCGGCCAGCAGAGTCTGGTGGCAGTGCGTCCGCCCACCA
AGCAGGCCCATCCGCCGAAAAAGTTTAGTCCCAAGGACGAAAAGTCCGGC
CAACGAAAAGTGGCCAAGACCACTAGGAAACCGATGGATCAGAGAACGAG
TACAACTAGTCGAAGCGCAACAACAACTAGCACACAAAAACCCACTACAG
ATGGACCCTTTCGCATTGCACTGCCCACCTTGAACTTCCCACGCGACAAC
CAGGATAAGAACAGGGATAGGGAAACGGAGAAGGGCAAGAGGTCGGCTGC
CGAGCTGCGCTTGAGGTTCGATTGTCCGCGGGAGAACGAGGTGAGGTTCC
AGCTATTCCCCAAGATCTGCAAGGCGGATCGAGACTGTGCCGTGTGGCAA
CGGGATGAGCTGTGCTGTGATATCTTTGGAGCAAGCAGCTGTGTCTCTGG
CGTTCCAAAGCCGCTAGAGGAGACTCCACATGCTCGTAAGTGGGTTTAAT
CCTTAGCTGCTATAGATATTATTCAATTTATTGCTCTTGCTAGCCATTCT
GGGCTTGATACCTCGCAAGTGCCCGAGTAGACCGCTCGCCGAGCTCTGGT
GGGACGTCCAGGAGTGCTCCACAGACATGGACTGCTGGCCAAGGGTCTGT
TGCCCGGATGGGCGTAGGAGATACTGCCGCACCTCGCAGCCGGAGTTGGA
AACAGCTCCAGTGCCAGTGAAGCGATCCTTCGACTATCGTAAGTTAAAAG
TTTTCCGTATGATAACCGAAATCAATCGAAGCCTTGCGCTTTTCCAGTTA
CAGAGTACCTGGAGTGCACAGCCCCGCCGCCGCCCATCTTTGACCTTCAT
CCCAAGGCGTGCACCTCCACCTTGGATTGCTTTCCGAATGTGTGCTGCCA
GGAGGCGGGACTGCGCCACTGCCGGCCGCCCAAGAAGTCCGTGCTCACAC
TGATGGCCAACTTTCTCAACGTGGACTTCGTGAAGCGACTGGCACAGAAT
ATCGTTATCAAGTAGGGCGAACCGTGAATTTCCCACTATTTTTCAACGTG
CGTCGAGCACCTTCGACAGAACCATTTCGAAACCGCCGTGAAATCTCGCC
CGGGTTTGTTTGGCCACGCTGATAACCAAAAAGAAGATATGCCCACACCC
ATACCATTCATAGACATACATATGTATGCACCTTTGTATACTGCGCACCC
CATCCATTCGTAATTCTCCATTAAGTATTGTTCACCTAGCCTAGTATTAG
ACCTAAGCTGCATTCGTAGGCTAGCAAAGTAAATAAAGTATATATGTATG
TATACGAACCATAAAAAAAAAAAAAAAAA

IP10641.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5607533..5608890 455..1812 6790 100 Plus
chr3R 27901430 chr3R 5605900..5606353 1..454 2270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9781697..9783057 455..1815 6805 100 Plus
3R 32079331 3R 9780064..9780517 1..454 2270 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9522528..9523888 455..1815 6805 100 Plus
3R 31820162 3R 9520895..9521348 1..454 2270 100 Plus
Blast to na_te.dros performed 2019-03-15 10:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2803..2990 299..488 142 57 Plus

IP10641.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:53:48 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5605900..5606302 1..403 100 == Plus
chr3R 5607533..5608890 455..1812 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-06 11:39:56 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RB 1..876 124..999 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:29:06 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RC 1..862 124..985 100 == Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:15:32 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RC 1..862 124..985 100 == Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-06 11:39:56 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RB 1..1812 1..1812 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:29:06 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RC 1..985 1..985 100 == Plus
CG12947-RC 1181..1695 1298..1812 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:32 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
CG12947-RC 1..985 1..985 100 == Plus
CG12947-RC 1181..1695 1298..1812 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:48 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9780064..9780517 1..454 100 -> Plus
3R 9781697..9783054 455..1812 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:48 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9780064..9780517 1..454 100 -> Plus
3R 9781697..9783054 455..1812 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:48 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9780064..9780517 1..454 100 -> Plus
3R 9781697..9783054 455..1812 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:29:06 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5605786..5606239 1..454 100 -> Plus
arm_3R 5607419..5608776 455..1812 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:54 Download gff for IP10641.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9520895..9521348 1..454 100 -> Plus
3R 9522528..9523885 455..1812 100   Plus

IP10641.hyp Sequence

Translation from 123 to 998

> IP10641.hyp
MRLIWLQLLAAGVALYLANGCATAAKASTSRGVAQYKLPLPAPLPDHESV
AVSGADQARRQQQQQQKGASNQRRRTQVVRRRRPSSTTTTSSTSTTTTTT
STTTTTTTTTTPRPSLANGFNFFNRNFWSFGQQSLVAVRPPTKQAHPPKK
FSPKDEKSGQRKVAKTTRKPMDQRTSTTSRSATTTSTQKPTTDGPFRIAL
PTLNFPRDNQDKNRDRETEKGKRSAAELRLRFDCPRENEVRFQLFPKICK
ADRDCAVWQRDELCCDIFGASSCVSGVPKPLEETPHARKWV*

IP10641.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:19:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12947-PC 424 CG12947-PC 1..287 1..287 1500 100 Plus

IP10641.pep Sequence

Translation from 123 to 998

> IP10641.pep
MRLIWLQLLAAGVALYLANGCATAAKASTSRGVAQYKLPLPAPLPDHESV
AVSGADQARRQQQQQQKGASNQRRRTQVVRRRRPSSTTTTSSTSTTTTTT
STTTTTTTTTTPRPSLANGFNFFNRNFWSFGQQSLVAVRPPTKQAHPPKK
FSPKDEKSGQRKVAKTTRKPMDQRTSTTSRSATTTSTQKPTTDGPFRIAL
PTLNFPRDNQDKNRDRETEKGKRSAAELRLRFDCPRENEVRFQLFPKICK
ADRDCAVWQRDELCCDIFGASSCVSGVPKPLEETPHARKWV*

IP10641.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17841-PA 426 GF17841-PA 1..289 1..287 709 64 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17158-PA 333 GG17158-PA 23..196 111..287 707 87 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17412-PA 456 GH17412-PA 68..318 28..286 527 52.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG12947-PC 424 CG12947-PC 1..287 1..287 1500 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22742-PA 434 GI22742-PA 56..297 22..287 585 57.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24307-PA 370 GL24307-PA 64..233 113..287 633 75.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11930-PB 426 GA11930-PB 16..289 14..287 727 67.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23840-PA 337 GM23840-PA 24..200 111..287 765 94.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18650-PA 146 GD18650-PA 1..144 1..136 301 79.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22743-PA 501 GJ22743-PA 119..364 22..287 605 58.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:33:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11968-PA 315 GK11968-PA 2..178 112..287 523 67 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25989-PA 337 GE25989-PA 23..200 111..287 717 86 Plus