Clone IP10665 Report

Search the DGRC for IP10665

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:106
Well:65
Vector:pOT2
Associated Gene/TranscriptCG13690-RA
Protein status:IP10665.pep: gold
Preliminary Size:1044
Sequenced Size:1230

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13690 2005-01-01 Successful iPCR screen
CG13690 2008-04-29 Release 5.5 accounting
CG13690 2008-08-15 Release 5.9 accounting
CG13690 2008-12-18 5.12 accounting

Clone Sequence Records

IP10665.complete Sequence

1230 bp (1230 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023255

> IP10665.complete
CATAGCGTCGTTTAAACGTAAACAAAAAAAAGCGCGCGAAAATGTCGGAC
CAAGAAGACGTAGTTGTAAAAAAAGAAAAAAAATGTATAGAAAATATTGA
TGAGAACGACGAAGAGCCCGATGATGTAGATTTTAAGGACAGCGGAAAAA
TAAGCTCCTTGAAGGCCCTGGGTCCATTTATAGCCGGCAAGGAGAATAGC
CGCAACACGGTTTACCTCAGCGATGTTCCGGATATTTGCAAGGATAAACC
GTGCATGCTGGGCGTGGACGAAGCAGGGCGTGGTCCCGTCCTGGGACCTA
TGGTATATGGGATCTCCTACTGTCCACTGGAAAGTAACAAGGCTTTAGAG
GACCTGGGATGCGCCGATTCCAAACAACTAACCGAGGGGAAACGTGATAT
CATATTTAACGATATCAACACCAAGGAATATGCGACCAGTTGCGTTGGCT
GGGCCGTGGAGATCATATCGCCGAACACGATCAGCACCAGCATGTACCGG
CGGTCGAAGTGCTCCCTGAACGAAGTTTCCATGGACTCGGCCATGGGCCT
TATCCAACAGGCGATCGATGCGGGCGTCAATATAGCCGAGGTTTATGTGG
ATACGGTGGGTCCGCCGGAGAAGTACCAGGAGAAGTTGCTCAAACGTTTC
CCCAGCTTTAAAATCACCGTGGCGAAAAAAGCTGACTCCACCTATCCAAT
AGTCTCTGCTGCTAGTATATGCGCCAAAGTCACCCGTGATCATGCCCTCA
AGGTGTGGAGCTTCCCCGAGGGCTTGGTCATTAAGGATAACGAGTTCGGC
AGTGGATATCCGGGAGATCCGGTCACAAGAAGATTTCTGACCGAGTACAT
CGATCTAGTGTTTGGATTTCCACGACTTGTGCGCTTCAGTTGGTCCACCG
CGGAAAACGCACTGGCGGACAAGGCCTATGACATGGAGTTCGACGAGCCG
GATTCCGAGAAGCCCAAGTACGCCGGCACCAAGCTCACAAAGTTCTTTAA
GGGCACAACAAAATCCGGCGAAATAATTCGCGAGGAGTGCCGCTTCTTTA
AGCAACGCCATCTGGAAAGTGTCATGGAGTTTTAGCAACAAATGAAAATA
AAATTAAGTTCAGGAGTATCTATATTTACAAAGAATAAAGTTTAATTTAA
GTACTTTAGTATTAAATTTTAAAATGCTAAAATACAAAAAACACCCAGGC
CCAAAACGAAAAAAAAAAAAAAAAAAAAAA

IP10665.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG13690-RA 1213 CG13690-RA 1..1213 1..1212 5980 99.6 Plus
ebi-RA 3457 ebi-RA 3349..3457 1212..1104 545 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:47:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 418448..419655 1208..1 6025 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:47:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 418430..419642 1212..1 5970 99.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 418430..419642 1212..1 5980 99.6 Minus
Blast to na_te.dros performed 2019-03-16 23:47:10
Subject Length Description Subject Range Query Range Score Percent Strand
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 2548..2637 1184..1095 125 62.6 Minus
HMS-Beagle2 7220 HMS-Beagle2 Beagle2 7220bp 724..764 1186..1146 124 78 Minus

IP10665.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:48:04 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 418448..419655 1..1208 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:43 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1044 42..1085 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:07 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1044 42..1085 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:09 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1044 42..1085 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:48 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1044 42..1085 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:59:23 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1044 42..1085 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:04:53 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1209 1..1208 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:07 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1209 1..1208 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:09 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 11..1219 1..1208 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:49 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 1..1209 1..1208 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:59:23 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
CG13690-RA 11..1219 1..1208 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:04 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
2L 418434..419642 1..1208 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:04 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
2L 418434..419642 1..1208 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:48:04 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
2L 418434..419642 1..1208 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:09 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 418434..419642 1..1208 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:02 Download gff for IP10665.complete
Subject Subject Range Query Range Percent Splice Strand
2L 418434..419642 1..1208 99   Minus

IP10665.hyp Sequence

Translation from 41 to 1084

> IP10665.hyp
MSDQEDVVVKKEKKCIENIDENDEEPDDVDFKDSGKISSLKALGPFIAGK
ENSRNTVYLSDVPDICKDKPCMLGVDEAGRGPVLGPMVYGISYCPLESNK
ALEDLGCADSKQLTEGKRDIIFNDINTKEYATSCVGWAVEIISPNTISTS
MYRRSKCSLNEVSMDSAMGLIQQAIDAGVNIAEVYVDTVGPPEKYQEKLL
KRFPSFKITVAKKADSTYPIVSAASICAKVTRDHALKVWSFPEGLVIKDN
EFGSGYPGDPVTRRFLTEYIDLVFGFPRLVRFSWSTAENALADKAYDMEF
DEPDSEKPKYAGTKLTKFFKGTTKSGEIIREECRFFKQRHLESVMEF*

IP10665.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13690-PA 347 CG13690-PA 1..347 1..347 1816 100 Plus

IP10665.pep Sequence

Translation from 41 to 1084

> IP10665.pep
MSDQEDVVVKKEKKCIENIDENDEEPDDVDFKDSGKISSLKALGPFIAGK
ENSRNTVYLSDVPDICKDKPCMLGVDEAGRGPVLGPMVYGISYCPLESNK
ALEDLGCADSKQLTEGKRDIIFNDINTKEYATSCVGWAVEIISPNTISTS
MYRRSKCSLNEVSMDSAMGLIQQAIDAGVNIAEVYVDTVGPPEKYQEKLL
KRFPSFKITVAKKADSTYPIVSAASICAKVTRDHALKVWSFPEGLVIKDN
EFGSGYPGDPVTRRFLTEYIDLVFGFPRLVRFSWSTAENALADKAYDMEF
DEPDSEKPKYAGTKLTKFFKGTTKSGEIIREECRFFKQRHLESVMEF*

IP10665.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24795-PA 347 GF24795-PA 1..347 1..347 1608 86.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24650-PA 347 GG24650-PA 1..347 1..347 1707 91.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10519-PA 334 GH10519-PA 2..334 5..347 1505 81.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG13690-PA 347 CG13690-PA 1..347 1..347 1816 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18036-PA 342 GI18036-PA 2..342 5..347 1516 83.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19264-PA 340 GL19264-PA 2..340 5..347 1572 85.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12461-PA 340 GA12461-PA 2..340 5..347 1567 85.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16670-PA 347 GM16670-PA 1..347 1..347 1795 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22959-PA 347 GD22959-PA 1..347 1..347 1790 96.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19740-PA 339 GJ19740-PA 2..339 5..347 1522 82.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22869-PA 336 GK22869-PA 11..336 21..347 1490 84.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16128-PA 347 GE16128-PA 1..347 1..347 1738 93.7 Plus