Clone IP10670 Report

Search the DGRC for IP10670

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:106
Well:70
Vector:pOT2
Associated Gene/TranscriptCG13833-RA
Protein status:IP10670.pep: gold
Preliminary Size:966
Sequenced Size:1097

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13833 2005-01-01 Successful iPCR screen
CG13833 2008-04-29 Release 5.5 accounting
CG13833 2008-08-15 Release 5.9 accounting
CG13833 2008-12-18 5.12 accounting

Clone Sequence Records

IP10670.complete Sequence

1097 bp (1097 high quality bases) assembled on 2006-01-24

GenBank Submission: BT024327

> IP10670.complete
CGCCATTCTCTCGGCACGGTTGTGACTCAAAAGTTGGTGGTTAAAAAATA
AGAAAAATGTCAGAAGTAGTACGAAACACTCTGGTAAAACTGCAGGCCAT
AATCGCACTGATCGGTTTGGCGGCCATAACGCCACTACTCATTTTGGTAG
CACTACTCGGCCGACTGATCGCCAAACTCTGCTGGTGCTCGGCGCCGAAA
AGTATCGCGGGAGAAGTGGCCGTGGTCACTGGAGCTGGTCATGGACTAGG
TCGTGCCATATCCTTGGAACTGGCTAAAAAAGGCTGTCACATCGCCGTGG
TGGATATCAATGTTTCCGGAGCGGAAGACACCGTCAAGCAAATCCAAGAT
ATCTATAAGGTTCGCGCAAAGGCATACAAGGCCAATGTAACCAATTACGA
CGATCTAGTTGAGCTGAACTCCAAAGTGGTCGAGGAAATGGGTCCAGTTA
CCGTCCTGGTTAATAATGCTGGTGTCATGATGCATCGCAATATGTTTAAT
CCGGACCCGGCCGATGTGCAGCTAATGATCAATGTTAACCTTACGTCGCA
TTTCTGGACCAAGCTGGTTTTCCTACCCAAAATGAAGGAATTGCGCAAAG
GTTTCATTGTTACAATCAGTTCATTGGCAGGTGTTTTCCCATTGCCCTAC
AGTGCGACTTACACCACCACCAAATCTGGCGCCTTGGCGCACATGAGGAC
CCTGCGCATGGAGTTGGATCTGGAGAACCAGAAGGACATCCATGTGACCA
CCGTGCTGCCCAGTTTTCTGCGCACGAACAGTGATGTTACGCAGCTGACG
CATACCATAGGATTTGGCGACGTATATCCACTGTTCACCGGAGAGGAGGT
CGCCCAGCGTATAGTGGCCGGAATGGTGAGGGGTGAGGCCGAGATCACCG
TGCCGGGAATGGCATGCCTACTCTACCGAGTGATTCTCATACTTCCGGCT
GACTGGCAAGATCGAATTATCCTATTGTTCAGCAGGAATAAATTTAAGAA
GCTCCGAGATGAGCATTCCTGAGGAGGATCCGGCGGATGGAGGTGAATAA
AAATATTGGTCCGGTTACGGAAAAATAAAAAAAAAAAAAAAAAAAAA

IP10670.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG13833.a 1402 CG13833.a 320..1397 1..1078 5390 100 Plus
CG13833-RA 1402 CG13833-RA 320..1397 1..1078 5390 100 Plus
CG13833.b 1554 CG13833.b 472..1549 1..1078 5390 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:55:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18856688..18857136 1076..628 2245 100 Minus
chr3R 27901430 chr3R 18858742..18858967 226..1 1115 99.6 Minus
chr3R 27901430 chr3R 18857339..18857517 557..379 895 100 Minus
chr3R 27901430 chr3R 18857631..18857788 381..224 790 100 Minus
chr3R 27901430 chr3R 18857198..18857274 633..557 385 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:55:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23033282..23033732 1078..628 2255 100 Minus
3R 32079331 3R 23035338..23035563 226..1 1130 100 Minus
3R 32079331 3R 23033935..23034113 557..379 895 100 Minus
3R 32079331 3R 23034227..23034384 381..224 790 100 Minus
3R 32079331 3R 23033794..23033870 633..557 385 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22774113..22774563 1078..628 2255 100 Minus
3R 31820162 3R 22776169..22776394 226..1 1130 100 Minus
3R 31820162 3R 22774766..22774944 557..379 895 100 Minus
3R 31820162 3R 22775058..22775215 381..224 790 100 Minus
3R 31820162 3R 22774625..22774701 633..557 385 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:55:32 has no hits.

IP10670.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:56:13 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18857632..18857787 225..380 100 <- Minus
chr3R 18857201..18857273 558..630 100 <- Minus
chr3R 18857339..18857515 381..557 100 <- Minus
chr3R 18856688..18857133 631..1076 100 <- Minus
chr3R 18858744..18858967 1..224 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:45 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:35:41 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:53:17 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:10:22 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:49:26 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:07:09 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:35:40 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..1076 1..1076 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:17 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..1076 1..1076 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:10:22 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..966 57..1022 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:49:26 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
CG13833-RA 1..1076 1..1076 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:56:13 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23033284..23033729 631..1076 100 <- Minus
3R 23033797..23033869 558..630 100 <- Minus
3R 23033935..23034111 381..557 100 <- Minus
3R 23034228..23034383 225..380 100 <- Minus
3R 23035340..23035563 1..224 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:56:13 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23033284..23033729 631..1076 100 <- Minus
3R 23033797..23033869 558..630 100 <- Minus
3R 23033935..23034111 381..557 100 <- Minus
3R 23034228..23034383 225..380 100 <- Minus
3R 23035340..23035563 1..224 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:56:13 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23033284..23033729 631..1076 100 <- Minus
3R 23033797..23033869 558..630 100 <- Minus
3R 23033935..23034111 381..557 100 <- Minus
3R 23034228..23034383 225..380 100 <- Minus
3R 23035340..23035563 1..224 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:17 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18859006..18859451 631..1076 100 <- Minus
arm_3R 18859519..18859591 558..630 100 <- Minus
arm_3R 18859657..18859833 381..557 100 <- Minus
arm_3R 18859950..18860105 225..380 100 <- Minus
arm_3R 18861062..18861285 1..224 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:59:25 Download gff for IP10670.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22774115..22774560 631..1076 100 <- Minus
3R 22774628..22774700 558..630 100 <- Minus
3R 22774766..22774942 381..557 100 <- Minus
3R 22775059..22775214 225..380 100 <- Minus
3R 22776171..22776394 1..224 100   Minus

IP10670.pep Sequence

Translation from 56 to 1021

> IP10670.pep
MSEVVRNTLVKLQAIIALIGLAAITPLLILVALLGRLIAKLCWCSAPKSI
AGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDIY
KVRAKAYKANVTNYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPD
PADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSA
TYTTTKSGALAHMRTLRMELDLENQKDIHVTTVLPSFLRTNSDVTQLTHT
IGFGDVYPLFTGEEVAQRIVAGMVRGEAEITVPGMACLLYRVILILPADW
QDRIILLFSRNKFKKLRDEHS*

IP10670.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:17:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18273-PA 321 GF18273-PA 1..318 1..318 1138 64.5 Plus
Dana\GF18272-PA 363 GF18272-PA 67..349 26..308 462 37 Plus
Dana\GF20987-PA 323 GF20987-PA 57..289 48..283 318 32.9 Plus
Dana\GF24197-PA 404 GF24197-PA 86..329 48..297 318 30.3 Plus
Dana\GF15490-PA 325 GF15490-PA 52..296 48..298 259 28.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:17:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12469-PA 321 GG12469-PA 1..321 1..321 1421 81.6 Plus
Dere\GG12468-PA 361 GG12468-PA 88..347 48..308 452 37.9 Plus
Dere\GG17587-PA 320 GG17587-PA 55..300 49..297 320 31.6 Plus
Dere\GG21531-PA 408 GG21531-PA 91..334 48..297 267 30.3 Plus
Dere\GG25019-PA 325 GG25019-PA 52..296 48..298 251 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18225-PA 314 GH18225-PA 3..309 5..316 794 50 Plus
Dgri\GH18214-PA 370 GH18214-PA 97..354 48..306 453 37.5 Plus
Dgri\GH12947-PA 164 GH12947-PA 1..164 127..293 411 49.7 Plus
Dgri\GH24349-PA 325 GH24349-PA 51..305 40..297 319 31.3 Plus
Dgri\GH11338-PA 420 GH11338-PA 82..325 48..297 267 29.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13833-PA 321 CG13833-PA 1..321 1..321 1620 100 Plus
CG17121-PA 361 CG17121-PA 52..347 9..308 455 35.9 Plus
CG9265-PD 399 CG9265-PD 82..317 48..289 320 30.1 Plus
CG9265-PC 399 CG9265-PC 82..317 48..289 320 30.1 Plus
CG9265-PB 399 CG9265-PB 82..317 48..289 320 30.1 Plus
CG9265-PA 399 CG9265-PA 82..317 48..289 320 30.1 Plus
Ldsdh1-PA 320 CG2254-PA 56..286 50..283 317 33.6 Plus
firl-PE 318 CG14946-PE 51..289 48..290 316 31.1 Plus
firl-PC 318 CG14946-PC 51..289 48..290 316 31.1 Plus
firl-PD 318 CG14946-PD 51..289 48..290 316 31.1 Plus
CG15629-PA 325 CG15629-PA 52..296 48..298 291 28.5 Plus
spidey-PA 321 CG1444-PA 40..242 40..241 210 29 Plus
CG3699-PA 251 CG3699-PA 2..185 49..241 203 29 Plus
CG10425-PA 336 CG10425-PA 7..219 15..235 201 25.8 Plus
Mfe2-PB 598 CG3415-PB 12..184 52..219 195 31.5 Plus
Mfe2-PA 598 CG3415-PA 12..184 52..219 195 31.5 Plus
CG13284-PE 325 CG13284-PE 8..242 12..240 190 28.3 Plus
CG13284-PA 325 CG13284-PA 8..242 12..240 190 28.3 Plus
CG13284-PC 338 CG13284-PC 21..255 12..240 190 28.3 Plus
CG13284-PD 339 CG13284-PD 22..256 12..240 190 28.3 Plus
CG13284-PB 339 CG13284-PB 22..256 12..240 190 28.3 Plus
CG7601-PA 326 CG7601-PA 51..288 50..282 186 27.4 Plus
CG3603-PB 249 CG3603-PB 6..193 50..240 183 27.8 Plus
CG3603-PA 249 CG3603-PA 6..193 50..240 183 27.8 Plus
CG31548-PA 256 CG31548-PA 2..190 49..241 178 25.4 Plus
CG6012-PA 308 CG6012-PA 5..235 12..240 177 26.3 Plus
CG12171-PA 257 CG12171-PA 3..190 49..240 176 27.6 Plus
CG40485-PA 231 CG40485-PA 8..207 54..244 169 26.5 Plus
CG31546-PA 264 CG31546-PA 12..198 51..241 158 26.8 Plus
CG31549-PB 257 CG31549-PB 3..191 49..241 156 24.4 Plus
CG31549-PA 257 CG31549-PA 3..191 49..241 156 24.4 Plus
CG40486-PC 247 CG40486-PC 8..224 54..270 155 26.7 Plus
CG40486-PB 247 CG40486-PB 8..224 54..270 155 26.7 Plus
CG40485-PC 247 CG40485-PC 8..201 54..240 152 25.6 Plus
CG40485-PB 247 CG40485-PB 8..201 54..240 152 25.6 Plus
CG18814-PB 267 CG18814-PB 3..216 50..277 151 25.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10766-PA 283 GI10766-PA 19..276 57..314 802 53.5 Plus
Dmoj\GI10765-PA 319 GI10765-PA 31..312 37..314 793 52.1 Plus
Dmoj\GI10764-PA 355 GI10764-PA 49..341 16..308 462 35.7 Plus
Dmoj\GI17845-PA 412 GI17845-PA 76..319 48..297 312 30.7 Plus
Dmoj\GI11003-PA 420 GI11003-PA 154..400 48..297 308 31.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27358-PA 319 GL27358-PA 3..314 5..316 963 58 Plus
Dper\GL27357-PA 363 GL27357-PA 90..349 48..308 451 37.5 Plus
Dper\GL26900-PA 323 GL26900-PA 58..303 49..297 305 31.6 Plus
Dper\GL25873-PA 425 GL25873-PA 94..337 48..297 262 29.5 Plus
Dper\GL19368-PA 325 GL19368-PA 52..301 48..301 255 27.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12556-PA 319 GA12556-PA 3..314 5..316 1036 59 Plus
Dpse\GA14334-PA 363 GA14334-PA 90..349 48..308 451 37.5 Plus
Dpse\GA15325-PA 323 GA15325-PA 57..303 48..297 311 31.9 Plus
Dpse\GA21656-PA 425 GA21656-PA 94..337 48..297 262 29.5 Plus
Dpse\GA13859-PA 325 GA13859-PA 52..301 48..301 255 27.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23600-PA 321 GM23600-PA 1..321 1..321 1581 91.9 Plus
Dsec\GM23599-PA 361 GM23599-PA 88..347 48..308 461 38.3 Plus
Dsec\GM11216-PA 318 GM11216-PA 53..284 49..283 321 33.1 Plus
Dsec\GM23287-PA 362 GM23287-PA 45..288 48..297 264 30.3 Plus
Dsec\GM18492-PA 325 GM18492-PA 52..296 48..298 250 28.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18413-PA 321 GD18413-PA 1..321 1..321 1582 91.9 Plus
Dsim\GD16132-PA 251 GD16132-PA 1..217 64..283 271 32.1 Plus
Dsim\GD21662-PA 362 GD21662-PA 45..288 48..297 264 30.3 Plus
Dsim\GD23300-PA 325 GD23300-PA 52..296 48..298 241 27.5 Plus
Dsim\GD22134-PA 300 GD22134-PA 51..271 48..290 230 26.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14366-PA 321 GJ14366-PA 3..320 5..317 835 51.9 Plus
Dvir\GJ14365-PA 352 GJ14365-PA 79..338 48..308 456 37.9 Plus
Dvir\GJ15602-PA 328 GJ15602-PA 56..294 43..283 321 31.7 Plus
Dvir\GJ17339-PA 405 GJ17339-PA 81..324 48..297 272 30.3 Plus
Dvir\GJ23984-PA 300 GJ23984-PA 51..281 48..298 263 29 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11608-PA 320 GK11608-PA 5..319 7..321 984 56.5 Plus
Dwil\GK11607-PA 377 GK11607-PA 104..365 48..310 460 38 Plus
Dwil\GK25275-PA 332 GK25275-PA 67..298 49..283 339 33.9 Plus
Dwil\GK24717-PA 410 GK24717-PA 86..317 48..285 263 30.6 Plus
Dwil\GK24179-PA 325 GK24179-PA 52..296 48..298 247 26.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23993-PA 321 GE23993-PA 1..321 1..321 1394 81 Plus
Dyak\GE23991-PA 361 GE23991-PA 88..347 48..308 455 37.9 Plus
Dyak\GE17487-PA 318 GE17487-PA 53..284 49..283 317 33.5 Plus
Dyak\GE13009-PA 399 GE13009-PA 82..325 48..297 270 29.9 Plus
Dyak\GE18307-PA 325 GE18307-PA 70..296 66..298 236 26.8 Plus

IP10670.hyp Sequence

Translation from 56 to 1021

> IP10670.hyp
MSEVVRNTLVKLQAIIALIGLAAITPLLILVALLGRLIAKLCWCSAPKSI
AGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDIY
KVRAKAYKANVTNYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPD
PADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSA
TYTTTKSGALAHMRTLRMELDLENQKDIHVTTVLPSFLRTNSDVTQLTHT
IGFGDVYPLFTGEEVAQRIVAGMVRGEAEITVPGMACLLYRVILILPADW
QDRIILLFSRNKFKKLRDEHS*

IP10670.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG13833-PA 321 CG13833-PA 1..321 1..321 1620 100 Plus
CG17121-PA 361 CG17121-PA 52..347 9..308 455 35.9 Plus
CG9265-PD 399 CG9265-PD 82..317 48..289 320 30.1 Plus
CG9265-PC 399 CG9265-PC 82..317 48..289 320 30.1 Plus
CG2254-PA 320 CG2254-PA 56..286 50..283 317 33.6 Plus