Clone IP10673 Report

Search the DGRC for IP10673

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:106
Well:73
Vector:pOT2
Associated Gene/TranscriptCG13950-RA
Protein status:IP10673.pep: gold
Preliminary Size:951
Sequenced Size:1096

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13950 2005-01-01 Successful iPCR screen
CG13950 2008-04-29 Release 5.5 accounting
CG13950 2008-08-15 Release 5.9 accounting
CG13950 2008-12-18 5.12 accounting

Clone Sequence Records

IP10673.complete Sequence

1096 bp (1096 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023251

> IP10673.complete
CGTGGAGCCGCGATGAACGTTTGGAAAGCAAAGGTCCTAACGGAGGTCCC
ATTCGGACACGTCCTCATCGTCAGTGGGCGCGTCAAGCCTCATCCGAATA
AAATTTCGCTGGACCTCACGGACAATGTGAACGCGCAGAACGAGAGCGAA
ACGGTGTTCCTGAAGATCGAGGCCAATTTCCGCGAGGGCCAAATCATCCG
CAGCATGTTCCAGCCGGGCGGGGGATGGCAGCAGGAGGAGATCTCGAAGA
ACTGGAAGTGCGACGGCCCAAAGAACCCGCTGCAGCCTGGCCAGAGCTTC
ACCTTCCGGGTGGCGGTGCTGCAGCGATGCTTCGAGATCTACGTGAACGA
CCAGCTGTACGGGTCCTTCGAGTTCGTCAAGTTCCCCAAGCAAATCAACT
ACGTGCGCACCTACGGCGACTTCGAGAAGATCACCCAGTTCCACCACCGC
ATGCTCTTTCCGCTCGTCTTCCCCAGAACGCTCATGTGTCCGGACAAGGT
GGCCTTCCAGAGCGACGTGCCCAGGCGGTATGAAACCGGCACAGTGGTGG
CCATGGAGTGCATCGCCAAGGGCCCGCCGACCACGGAGTTCTCCATCTGC
TTCCAGTGCAACGACACCGGGCGTACGGTGCTCCGGTTCCACGTGAACTT
CGATCGGACAACCGTGTCACGCAGCTACCAGCGTGAAGACAACAGTTTTG
CCTTGAGCGACGAGGAGACCGAGGGCGAATTCCCATTTGTGCGCGGAAAG
CTCTTCAAGATCGCTTTTGGGCTCGGGGATCGGGCTTTCCTGATCGCCGT
CAACGGGCAGTACTTCACCTACTACAACTTTCCCGGACGCCCCTTCTCCA
TATCCACTCTGAAGTGCTTCACCAACGAAGTGGGCGACTTCGCCGTGCGG
AGCCTGGAGTACCACTCCGATTCTCCGCTTCTGGCCCGCGTGGAGAAGTT
GTCCATCATTTAATCGATTCGAGTTCTCGTAGTATGCTCTTTGTTCAATC
GTTGGCTTTGATCACCGTACAGCACCAGTTAACTTCTTCTTGTGAGCATC
CAAATAAAGCAAAGCAGCTCTCCAAAAAAAAAAAAAAAAAAAAAAA

IP10673.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13950-RA 1364 CG13950-RA 291..1364 1..1074 5370 100 Plus
CG13950.a 1548 CG13950.a 556..1548 1..993 4965 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 860670..861263 102..695 2925 99.5 Plus
chr2L 23010047 chr2L 861333..861712 694..1073 1900 100 Plus
chr2L 23010047 chr2L 860203..860303 1..101 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 860764..861357 102..695 2970 100 Plus
2L 23513712 2L 861427..861809 694..1076 1915 100 Plus
2L 23513712 2L 860309..860409 1..101 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 860764..861357 102..695 2970 100 Plus
2L 23513712 2L 861427..861809 694..1076 1915 100 Plus
2L 23513712 2L 860309..860409 1..101 505 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:48:34 has no hits.

IP10673.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:49:40 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 860203..860303 1..101 100 -> Plus
chr2L 860670..861263 102..695 99 -> Plus
chr2L 861335..861712 696..1073 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:46 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:09 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:01:56 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:49 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:18:57 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:04:56 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:08 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..1073 1..1073 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:01:56 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..1073 1..1073 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:50 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..951 13..963 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:18:57 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG13950-RA 1..1073 1..1073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:49:40 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
2L 860764..861357 102..695 100 -> Plus
2L 861429..861806 696..1073 100   Plus
2L 860309..860409 1..101 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:49:40 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
2L 860764..861357 102..695 100 -> Plus
2L 861429..861806 696..1073 100   Plus
2L 860309..860409 1..101 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:49:40 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
2L 860764..861357 102..695 100 -> Plus
2L 861429..861806 696..1073 100   Plus
2L 860309..860409 1..101 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:01:56 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 860309..860409 1..101 100 -> Plus
arm_2L 860764..861357 102..695 100 -> Plus
arm_2L 861429..861806 696..1073 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:03 Download gff for IP10673.complete
Subject Subject Range Query Range Percent Splice Strand
2L 860764..861357 102..695 100 -> Plus
2L 861429..861806 696..1073 100   Plus
2L 860309..860409 1..101 100 -> Plus

IP10673.hyp Sequence

Translation from 0 to 962

> IP10673.hyp
RGAAMNVWKAKVLTEVPFGHVLIVSGRVKPHPNKISLDLTDNVNAQNESE
TVFLKIEANFREGQIIRSMFQPGGGWQQEEISKNWKCDGPKNPLQPGQSF
TFRVAVLQRCFEIYVNDQLYGSFEFVKFPKQINYVRTYGDFEKITQFHHR
MLFPLVFPRTLMCPDKVAFQSDVPRRYETGTVVAMECIAKGPPTTEFSIC
FQCNDTGRTVLRFHVNFDRTTVSRSYQREDNSFALSDEETEGEFPFVRGK
LFKIAFGLGDRAFLIAVNGQYFTYYNFPGRPFSISTLKCFTNEVGDFAVR
SLEYHSDSPLLARVEKLSII*

IP10673.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG13950-PA 316 CG13950-PA 1..316 5..320 1685 100 Plus
CG5335-PA 321 CG5335-PA 15..270 18..277 221 26.9 Plus

IP10673.pep Sequence

Translation from 12 to 962

> IP10673.pep
MNVWKAKVLTEVPFGHVLIVSGRVKPHPNKISLDLTDNVNAQNESETVFL
KIEANFREGQIIRSMFQPGGGWQQEEISKNWKCDGPKNPLQPGQSFTFRV
AVLQRCFEIYVNDQLYGSFEFVKFPKQINYVRTYGDFEKITQFHHRMLFP
LVFPRTLMCPDKVAFQSDVPRRYETGTVVAMECIAKGPPTTEFSICFQCN
DTGRTVLRFHVNFDRTTVSRSYQREDNSFALSDEETEGEFPFVRGKLFKI
AFGLGDRAFLIAVNGQYFTYYNFPGRPFSISTLKCFTNEVGDFAVRSLEY
HSDSPLLARVEKLSII*

IP10673.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15081-PA 316 GF15081-PA 1..316 1..316 1646 96.8 Plus
Dana\GF11976-PA 321 GF11976-PA 13..287 12..298 252 28.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24753-PA 316 GG24753-PA 1..316 1..316 1690 99.4 Plus
Dere\GG21911-PA 321 GG21911-PA 13..270 12..273 221 26.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11249-PA 316 GH11249-PA 1..316 1..316 1566 90.8 Plus
Dgri\GH20302-PA 321 GH20302-PA 13..314 12..314 240 25.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13950-PB 316 CG13950-PB 1..316 1..316 1685 100 Plus
CG13950-PA 316 CG13950-PA 1..316 1..316 1685 100 Plus
CG5335-PA 321 CG5335-PA 15..270 14..273 221 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21857-PA 316 GI21857-PA 1..316 1..316 1600 93.4 Plus
Dmoj\GI19972-PA 321 GI19972-PA 13..268 12..270 245 27.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19503-PA 316 GL19503-PA 1..316 1..316 1634 96.2 Plus
Dper\GL17029-PA 321 GL17029-PA 13..268 12..270 223 26.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12649-PA 316 GA12649-PA 1..316 1..316 1627 95.9 Plus
Dpse\GA24336-PA 321 GA24336-PA 13..268 12..270 236 25.8 Plus
Dpse\GA18810-PA 321 GA18810-PA 13..268 12..270 223 26.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16774-PA 316 GM16774-PA 1..316 1..316 1687 99.1 Plus
Dsec\GM21902-PA 321 GM21902-PA 13..270 12..273 220 26.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11398-PA 321 GD11398-PA 13..270 12..273 223 26.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17801-PA 316 GJ17801-PA 1..316 1..316 1582 92.1 Plus
Dvir\GJ21223-PA 321 GJ21223-PA 13..268 12..270 240 27.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24442-PA 318 GK24442-PA 1..318 1..316 1543 89.6 Plus
Dwil\GK21966-PA 321 GK21966-PA 13..271 12..276 226 26 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17166-PA 316 GE17166-PA 1..316 1..316 1678 98.7 Plus
Dyak\GE11985-PA 321 GE11985-PA 13..270 12..273 226 26.3 Plus