Clone IP10714 Report

Search the DGRC for IP10714

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:107
Well:14
Vector:pOT2
Associated Gene/TranscriptCG10909-RA
Protein status:IP10714.pep: gold
Preliminary Size:1112
Sequenced Size:1210

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10909 2005-01-01 Successful iPCR screen
CG10909 2008-04-29 Release 5.5 accounting
CG10909 2008-08-15 Release 5.9 accounting
CG10909 2008-12-18 5.12 accounting

Clone Sequence Records

IP10714.complete Sequence

1210 bp (1210 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023239

> IP10714.complete
AATTTTGAGCATACAACCGATGTGGGGATAAATCGGTTTCGAATAAAATT
CAATAAAGTTGAGAAAAAACTGATGAGATGAGTATGGAATCCAAGTCGAA
GCGGCGGTCCCCTCCAAGCAGTACTCTTGAAGAAGAAGTTCCTGGAAAGA
CCATCCACCCTGAGGATCCGAAAATTACATCTAAAAACTTCGAGAATCCC
ACAAAAGAAACTTCCATCCAGAGCCCCATTAAGAACTCCATAAAACCATC
GTGGAATCCAGAACCCAAGATCACTAGGACCTCCATATGGGACATTGAAT
CCGCAGGAGGGGATTCAATACAAAATGATTGTCAAAGTGAATGTAACGTT
GAAGATCAAGGTCATGAGCAAGAGGTCACGTTGGAGACTAGGATATTTTC
TGGAACCTCAGACCGCATTGAACCGCACCGACATTACGGCGTCTATTTGT
TGCGCAACCGCTTCGATGCCATACAATTGCTCACCAGGAATACGAGCTCC
AGTGCGGATGACTACGGTGAGCGGAGGGTCATTTCGGAATACCGGGAAAT
GCGATGTGAATTCCGAGTCTGGTCTCCCTTCCAATCCAAACTGGCAGCTG
GAATAATGGGTGGTGTCAGTGATTTGCATCTGCAAATTGGCTCAAAGGTC
CTATACCTGGGAGCTGGGTTTGGGCGATCGGTATCCCACATCTCGGATAT
AGTGGGTGACTCCGGAATGGTTTATGCTGTGGAGCAGATTCCTTGGGCTG
GTCGTCAGCTGACCATAATGGCCAATCGTCGTTCAAATATCGTACCCATA
GTCGAGGATGCTACCATGCCATATAAATACCGCTATGAGGTTCCCGCTTG
CATTGACATTATCTTCGCTGATCTTCCGCCTTCGGTTCTGATTCGAGCTC
TGATGCTAAATGCTAGACACTTCCTGAACCCCGGTGGTCACTTCGTGGCC
TATTTACATTCGCCTACTAGTCAAGGTGTGGTCTTTAATAAGGATTCCTT
TGCCGCCGAGAGGAGACTTTTAAAGGAGAAGCAGCTGGAACCAAAGGAAA
TGGTTCTATTGGAGCCCTTTAAGGCCGGTTACGCCTTTGTTGTGGGCGTG
TACATTCGTAAGGATGTTTCCTTGTAGTTGTCATTATACATGTTTCATGT
TACTTTAAATCATTAATAAATTTAGACTTTGCGTTGCTAAAAAAAAAAAA
AAAAAAAAAA

IP10714.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10909-RA 1188 CG10909-RA 1..1188 1..1188 5940 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8735439..8736624 1187..1 5795 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:02:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:58:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12910118..12911307 1190..1 5950 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12650949..12652138 1190..1 5950 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:58:13 has no hits.

IP10714.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:59:25 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8735438..8736624 1..1188 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:50 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1050 78..1127 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:56 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1050 78..1127 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:53:52 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1050 78..1127 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:36 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1050 78..1127 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:51:01 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1050 78..1127 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:04:24 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1112 16..1127 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:56 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1173 16..1188 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:52 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1173 16..1188 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:36 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1112 16..1127 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:51:01 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
CG10909-RA 1..1173 16..1188 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:25 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12910120..12911307 1..1188 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:25 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12910120..12911307 1..1188 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:59:25 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12910120..12911307 1..1188 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:52 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8735842..8737029 1..1188 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:50 Download gff for IP10714.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12650951..12652138 1..1188 100   Minus

IP10714.pep Sequence

Translation from 77 to 1126

> IP10714.pep
MSMESKSKRRSPPSSTLEEEVPGKTIHPEDPKITSKNFENPTKETSIQSP
IKNSIKPSWNPEPKITRTSIWDIESAGGDSIQNDCQSECNVEDQGHEQEV
TLETRIFSGTSDRIEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERR
VISEYREMRCEFRVWSPFQSKLAAGIMGGVSDLHLQIGSKVLYLGAGFGR
SVSHISDIVGDSGMVYAVEQIPWAGRQLTIMANRRSNIVPIVEDATMPYK
YRYEVPACIDIIFADLPPSVLIRALMLNARHFLNPGGHFVAYLHSPTSQG
VVFNKDSFAAERRLLKEKQLEPKEMVLLEPFKAGYAFVVGVYIRKDVSL*

IP10714.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16918-PA 325 GF16918-PA 63..323 82..347 884 60.2 Plus
Dana\GF11304-PA 344 GF11304-PA 113..338 114..342 533 47.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17090-PA 349 GG17090-PA 1..349 1..349 1387 76.8 Plus
Dere\Fib-PA 345 GG20072-PA 114..339 114..342 532 46.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:51:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21076-PA 331 GH21076-PA 100..325 114..342 525 46.3 Plus
Dgri\GH19203-PA 275 GH19203-PA 52..272 114..342 482 45 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG10909-PA 349 CG10909-PA 1..349 1..349 1817 100 Plus
Fib-PA 344 CG9888-PA 108..338 109..342 526 46.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18675-PA 334 GI18675-PA 103..328 114..342 531 47.2 Plus
Dmoj\GI24236-PA 292 GI24236-PA 27..281 72..342 453 37.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:51:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23158-PA 308 GL23158-PA 69..304 114..344 635 51.7 Plus
Dper\GL10774-PA 342 GL10774-PA 111..336 114..342 535 47.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10632-PA 309 GA10632-PA 69..304 114..344 634 51.3 Plus
Dpse\GA24481-PA 342 GA24481-PA 111..336 114..342 535 47.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:51:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25973-PA 343 GM25973-PA 1..343 3..349 1590 86.5 Plus
Dsec\GM15587-PA 344 GM15587-PA 113..338 114..342 535 47.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:51:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20534-PA 347 GD20534-PA 1..347 3..349 1626 87.6 Plus
Dsim\GD25085-PA 345 GD25085-PA 114..339 114..342 535 47.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21690-PA 338 GJ21690-PA 107..332 114..342 535 47.6 Plus
Dvir\GJ10811-PA 289 GJ10811-PA 59..279 114..342 521 46.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:51:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12213-PA 320 GK12213-PA 67..294 114..342 596 48.5 Plus
Dwil\GK19601-PA 338 GK19601-PA 108..333 114..342 532 47.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24480-PA 347 GE24480-PA 1..347 1..349 1425 77.4 Plus
Dyak\Fib-PA 344 GE11610-PA 113..338 114..342 535 47.2 Plus

IP10714.hyp Sequence

Translation from 77 to 1126

> IP10714.hyp
MSMESKSKRRSPPSSTLEEEVPGKTIHPEDPKITSKNFENPTKETSIQSP
IKNSIKPSWNPEPKITRTSIWDIESAGGDSIQNDCQSECNVEDQGHEQEV
TLETRIFSGTSDRIEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERR
VISEYREMRCEFRVWSPFQSKLAAGIMGGVSDLHLQIGSKVLYLGAGFGR
SVSHISDIVGDSGMVYAVEQIPWAGRQLTIMANRRSNIVPIVEDATMPYK
YRYEVPACIDIIFADLPPSVLIRALMLNARHFLNPGGHFVAYLHSPTSQG
VVFNKDSFAAERRLLKEKQLEPKEMVLLEPFKAGYAFVVGVYIRKDVSL*

IP10714.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:30:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10909-PA 349 CG10909-PA 1..349 1..349 1817 100 Plus
Fib-PA 344 CG9888-PA 108..338 109..342 526 46.6 Plus