Clone IP10727 Report

Search the DGRC for IP10727

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:107
Well:27
Vector:pOT2
Associated Gene/TranscriptCG11788-RA
Protein status:IP10727.pep: gold
Preliminary Size:1182
Sequenced Size:1358

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11788 2005-01-01 Successful iPCR screen
CG11788 2008-04-29 Release 5.5 accounting
CG11788 2008-08-15 Release 5.9 accounting
CG11788 2008-12-18 5.12 accounting

Clone Sequence Records

IP10727.complete Sequence

1358 bp (1358 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023211

> IP10727.complete
CGAACATGGAATCCATGGAGGTTGATGAGTCTGCTGCCCAGCTCTACGTT
CGCACGCCGGAGGATGTGAAGGCCATTGTGAAGCATGCGAAACTGGACGA
GCGCCAGTTGACCCAACTCACCCAGGCTCTGTACTTTCCCTCGGCGGACG
TGGATTCGGACAATCTGCGCCTTCTGGAGCTCGATGGGCACATGCTTGGA
CAAATCCGCGACGGCCAGACGCTATATTTCAAGGGTGGCCAGAACGAGAA
GCTGGTGCTGTGCACCGATGAGCGAACGTACGACGTGAAGGGCGCGGAAA
TATCCAATAGCCTTTTGCTGGTACCGGACCTCAAGTTTGCCGCCGCCACC
AGCACCTCGCCGCTGAAGAGTCCGCGCACTGGCAACGCCAACGCCTCCCT
GGAGCGCAGCCTCAATGACAGCACGGAGGATGAACTGGAAGTGCCGCGAA
CTCTGGAGCAGCGGCCGGTGCTCAAGGTGTTCCACGAGTACTTCGAGTGC
CGCGAGATAAAGCCGCGCTTTCGCAAGCTGGGTGAACTACTGCAGCTGAC
TCGATATTCGGGGCCGGAGAACGAGTTCTGCGTGGAGCAGAAGCTACTCT
TTACCTTTTCGCAGCTCCTGGACACGGTGCAGTGCAGCCGCGGTCAGTTC
ATGGAGGGATTGAACCAATATCGAGCCATAGAACTGGACGGGCGAATGCG
CGTGATGGAGTACGAATACGAGTATCGCATTATTAACATGATGCTGGGTT
TGATAAGCGAAAACTCCTGGGCCTTGGACGAAGTGGAACGGGAGGAGACC
ATCAATGCACTGAAGGGCATAGCTCCAGAGGATGTTGTGGCTGGGCTGTT
TGATATCTATACCATTCCCAGTGAACGTTGCCCGGGCAAGTTTGAGTACC
AGGAGTCCTTGGTCTCCCGCATTGTGGCACAGAACATTCTTCAGCCGGGT
TTGCGCTTTCGCAACGAGGAGTTCATGCGCACCTGGCAGGAGGTACTGCC
CGAGGGCATGTCCTGCGACTTAAAGTACCTACGAGGTCTGGGCATTTGCG
ACAAGGAGGGAGCGCAGCCTTGCATACGCTCCCTGGCAGAGGAGTTACTG
CCCACCAATATAAGCGATCGCATGCGGGCGCTATTTAAGACTAAAAAGAG
ATGGACGATGGAGGAAATGGAACCGTACATAGAGTGCTTTACCACCCCAA
ACTTGTCCGTTTCCACACTATTGGCCAAGCACGCTCGCTCATTGACCGAT
GGAGGTGTGCGATACTTTGTTTCAAAGCATTGATGGAAACATCCAAGGCT
ATAGCTTTGTATCTCTTATTCAATAAAACAGCTTTAAGTTAAAAAAAAAA
AAAAAAAA

IP10727.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG11788-RA 1422 CG11788-RA 81..1421 1..1341 6705 100 Plus
CG9143-RA 2801 CG9143-RA 2619..2776 1341..1184 790 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:50:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16161822..16162963 44..1185 5710 100 Plus
chr2R 21145070 chr2R 16163020..16163176 1184..1340 785 100 Plus
chr2R 21145070 chr2R 16161720..16161762 1..43 215 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:03:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20274788..20275929 44..1185 5710 100 Plus
2R 25286936 2R 20275986..20276143 1184..1341 790 100 Plus
2R 25286936 2R 20274686..20274728 1..43 215 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20275987..20277128 44..1185 5710 100 Plus
2R 25260384 2R 20277185..20277342 1184..1341 790 100 Plus
2R 25260384 2R 20275885..20275927 1..43 215 100 Plus
Blast to na_te.dros performed on 2019-03-16 23:50:32 has no hits.

IP10727.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:51:35 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16161720..16161762 1..43 100 -> Plus
chr2R 16161822..16162961 44..1183 100 -> Plus
chr2R 16163020..16163176 1184..1340 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:58 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1278 6..1283 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:57 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1278 6..1283 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:51:45 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1278 6..1283 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:37 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1278 6..1283 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:01:40 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1278 6..1283 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:04:27 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1340 1..1340 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:57 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1340 1..1340 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:45 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 90..1429 1..1340 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:37 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 1..1340 1..1340 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:01:40 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
CG11788-RA 90..1429 1..1340 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:51:35 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20275986..20276142 1184..1340 100   Plus
2R 20274686..20274728 1..43 100 -> Plus
2R 20274788..20275927 44..1183 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:51:35 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20275986..20276142 1184..1340 100   Plus
2R 20274686..20274728 1..43 100 -> Plus
2R 20274788..20275927 44..1183 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:51:35 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20275986..20276142 1184..1340 100   Plus
2R 20274686..20274728 1..43 100 -> Plus
2R 20274788..20275927 44..1183 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:45 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16162191..16162233 1..43 100 -> Plus
arm_2R 16162293..16163432 44..1183 100 -> Plus
arm_2R 16163491..16163647 1184..1340 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:51 Download gff for IP10727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20275987..20277126 44..1183 100 -> Plus
2R 20277185..20277341 1184..1340 100   Plus
2R 20275885..20275927 1..43 100 -> Plus

IP10727.hyp Sequence

Translation from 2 to 1282

> IP10727.hyp
NMESMEVDESAAQLYVRTPEDVKAIVKHAKLDERQLTQLTQALYFPSADV
DSDNLRLLELDGHMLGQIRDGQTLYFKGGQNEKLVLCTDERTYDVKGAEI
SNSLLLVPDLKFAAATSTSPLKSPRTGNANASLERSLNDSTEDELEVPRT
LEQRPVLKVFHEYFECREIKPRFRKLGELLQLTRYSGPENEFCVEQKLLF
TFSQLLDTVQCSRGQFMEGLNQYRAIELDGRMRVMEYEYEYRIINMMLGL
ISENSWALDEVEREETINALKGIAPEDVVAGLFDIYTIPSERCPGKFEYQ
ESLVSRIVAQNILQPGLRFRNEEFMRTWQEVLPEGMSCDLKYLRGLGICD
KEGAQPCIRSLAEELLPTNISDRMRALFKTKKRWTMEEMEPYIECFTTPN
LSVSTLLAKHARSLTDGGVRYFVSKH*

IP10727.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11788-PA 425 CG11788-PA 1..425 2..426 2193 100 Plus

IP10727.pep Sequence

Translation from 5 to 1282

> IP10727.pep
MESMEVDESAAQLYVRTPEDVKAIVKHAKLDERQLTQLTQALYFPSADVD
SDNLRLLELDGHMLGQIRDGQTLYFKGGQNEKLVLCTDERTYDVKGAEIS
NSLLLVPDLKFAAATSTSPLKSPRTGNANASLERSLNDSTEDELEVPRTL
EQRPVLKVFHEYFECREIKPRFRKLGELLQLTRYSGPENEFCVEQKLLFT
FSQLLDTVQCSRGQFMEGLNQYRAIELDGRMRVMEYEYEYRIINMMLGLI
SENSWALDEVEREETINALKGIAPEDVVAGLFDIYTIPSERCPGKFEYQE
SLVSRIVAQNILQPGLRFRNEEFMRTWQEVLPEGMSCDLKYLRGLGICDK
EGAQPCIRSLAEELLPTNISDRMRALFKTKKRWTMEEMEPYIECFTTPNL
SVSTLLAKHARSLTDGGVRYFVSKH*

IP10727.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12257-PA 425 GF12257-PA 1..425 1..425 2030 87.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22022-PA 427 GG22022-PA 3..427 1..425 2193 95.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21819-PA 423 GH21819-PA 1..423 4..425 1827 79.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11788-PA 425 CG11788-PA 1..425 1..425 2193 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20790-PA 421 GI20790-PA 10..421 14..425 1882 83 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16838-PA 425 GL16838-PA 1..425 1..425 1968 84.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:51:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11199-PA 425 GA11199-PA 1..425 1..425 1981 84.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22004-PA 425 GM22004-PA 1..425 1..425 2239 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11503-PA 303 GD11503-PA 14..303 136..425 1540 97.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20524-PA 427 GJ20524-PA 3..427 1..425 1923 82.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19536-PA 425 GK19536-PA 3..425 4..425 1904 82 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12100-PA 425 GE12100-PA 1..425 1..425 2187 95.5 Plus