Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP10732.complete Sequence
1085 bp (1085 high quality bases) assembled on 2005-05-04
GenBank Submission: BT023207
> IP10732.complete
CTACGCTCTAACAAAATAAAATGGCCTGGTTAACTAAAATAATCATTATA
TTTATCCTTTTGCTACACACTCAATTGACTCAACTGATACAGTATATTGA
CGATGGTGACACATTTGATGGCTTTAACTCCATATTTGAAAAGCCAAAGA
AGCAACGAAGCGGTGCCATGGAGGACGATTTCGATCGAGATCGGGATCAG
TGGAAGGTCAATACCGACATGGACTCGCAATCGGGCATATGTCCCGCCGA
AAATCCGAATGATGTGAAGTATGAAAAGAAGGATCGCTGCAAGGTTGACA
GGAAGATGGTCAAGGACGAGGACGATGACGAGAATGCCGATCCTGCGGGC
AATAGTGATGACGATGATATCCATGATGGTGATGAAGACAATGGCGATGA
TGAGGCTTATGAAGAGGAGGACGACGACATTAGTTTTGAGGATGAAGCTT
TTGTTTCGAGAATTAACTGTTTGTTGGGATCTCTGCACAAGCACACCAAA
GCCATAACCGATAATCTGCAGATCCTTCAATCCCGCTTGTCAAAAGCGAA
AAATGACAACATATGCAGAAACAACAACCAAGGCACTACGCCTACGGAAC
ATCCTAGTCTGAAATGGTCCAAGAAGCCGGATTTCTATGAGGCAACCGAG
CTGTGTGCTGATGACAACTGCCATTTCGAGGACAGTGTGGATAACAAAGA
GGTCCAGCCACAAGCTTTTACTGAGGATCGTCGAGTGATGGTTCCGCCTC
TATTGCAACTCTTCCATGGTCCTGTCCAGCTGCAAACCACTTTGAACAGC
GGCCAGGACATCACGGGATCAAAGTCGAGATATTGGATGACCTCACCGGA
AACATCAGAGGAGTTTCAGGCTTCATCGCAATTACAGCCGGATGAAAAAA
ATCAAGAACGATACGAGGATTACGATGCTAAATTGCGTCGCCTCATGGAC
AGTCGGGATGAGATCGAGCGAAATGTGATGAGAATGATAACTCCGGATTT
ATAAAATAAATATTGTATGAATATTAATACTTAAAGAGACCCTACAATAA
AGAATAAAACCATTTGTAAAAAAAAAAAAAAAAAA
IP10732.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:25:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12433-RB | 1067 | CG12433-RB | 1..1067 | 1..1067 | 5335 | 100 | Plus |
CG12433-RC | 1307 | CG12433-RC | 1..974 | 1..974 | 4870 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 16911849..16912915 | 1..1067 | 5245 | 99.4 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:03:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:05:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17022304..17023371 | 1..1068 | 5340 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:16:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 17030402..17031469 | 1..1068 | 5340 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 13:05:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 68..131 | 1064..1002 | 128 | 70.8 | Minus |
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1606..1669 | 1002..1064 | 119 | 69.2 | Plus |
IP10732.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:06:07 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 16911849..16912162 | 1..314 | 99 | == | Plus |
chrX | 16912294..16912915 | 446..1067 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:59 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 1..984 | 21..1004 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:44:29 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 1..984 | 21..1004 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:06:41 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43996-RA | 1..984 | 21..1004 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:25:47 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 1..984 | 21..1004 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:09:22 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43996-RA | 1..984 | 21..1004 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:17:33 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 1..1067 | 1..1067 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:44:29 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 1..1067 | 1..1067 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:06:41 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43996-RA | 1..1067 | 1..1067 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:47 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12433-RB | 1..1067 | 1..1067 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:09:22 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43996-RA | 1..1067 | 1..1067 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:06:07 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17022304..17023370 | 1..1067 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:06:07 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17022304..17023370 | 1..1067 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:06:07 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17022304..17023370 | 1..1067 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:06:41 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16916337..16917403 | 1..1067 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:05:36 Download gff for
IP10732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17030402..17031468 | 1..1067 | 100 | | Plus |
IP10732.pep Sequence
Translation from 20 to 1003
> IP10732.pep
MAWLTKIIIIFILLLHTQLTQLIQYIDDGDTFDGFNSIFEKPKKQRSGAM
EDDFDRDRDQWKVNTDMDSQSGICPAENPNDVKYEKKDRCKVDRKMVKDE
DDDENADPAGNSDDDDIHDGDEDNGDDEAYEEEDDDISFEDEAFVSRINC
LLGSLHKHTKAITDNLQILQSRLSKAKNDNICRNNNQGTTPTEHPSLKWS
KKPDFYEATELCADDNCHFEDSVDNKEVQPQAFTEDRRVMVPPLLQLFHG
PVQLQTTLNSGQDITGSKSRYWMTSPETSEEFQASSQLQPDEKNQERYED
YDAKLRRLMDSRDEIERNVMRMITPDL*
IP10732.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:37:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF21737-PA | 450 | GF21737-PA | 57..214 | 49..203 | 156 | 36.7 | Plus |
Dana\GF21737-PA | 450 | GF21737-PA | 355..443 | 236..325 | 153 | 38.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:37:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19092-PA | 410 | GG19092-PA | 1..326 | 1..327 | 1178 | 71.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43996-PA | 327 | CG43996-PA | 1..327 | 1..327 | 1749 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:37:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13481-PA | 378 | GM13481-PA | 1..268 | 50..318 | 1059 | 83.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:37:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17639-PA | 431 | GE17639-PA | 1..321 | 1..318 | 1029 | 69.9 | Plus |
IP10732.hyp Sequence
Translation from 20 to 1003
> IP10732.hyp
MAWLTKIIIIFILLLHTQLTQLIQYIDDGDTFDGFNSIFEKPKKQRSGAM
EDDFDRDRDQWKVNTDMDSQSGICPAENPNDVKYEKKDRCKVDRKMVKDE
DDDENADPAGNSDDDDIHDGDEDNGDDEAYEEEDDDISFEDEAFVSRINC
LLGSLHKHTKAITDNLQILQSRLSKAKNDNICRNNNQGTTPTEHPSLKWS
KKPDFYEATELCADDNCHFEDSVDNKEVQPQAFTEDRRVMVPPLLQLFHG
PVQLQTTLNSGQDITGSKSRYWMTSPETSEEFQASSQLQPDEKNQERYED
YDAKLRRLMDSRDEIERNVMRMITPDL*
IP10732.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:31:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43996-PA | 327 | CG43996-PA | 1..327 | 1..327 | 1749 | 100 | Plus |