Clone IP10732 Report

Search the DGRC for IP10732

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:107
Well:32
Vector:pOT2
Associated Gene/TranscriptCG43996-RA
Protein status:IP10732.pep: gold
Preliminary Size:1140
Sequenced Size:1085

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12433 2005-01-01 Successful iPCR screen
CG12433 2008-04-29 Release 5.5 accounting
CG12433 2008-08-15 Release 5.9 accounting
CG12433 2008-12-18 5.12 accounting

Clone Sequence Records

IP10732.complete Sequence

1085 bp (1085 high quality bases) assembled on 2005-05-04

GenBank Submission: BT023207

> IP10732.complete
CTACGCTCTAACAAAATAAAATGGCCTGGTTAACTAAAATAATCATTATA
TTTATCCTTTTGCTACACACTCAATTGACTCAACTGATACAGTATATTGA
CGATGGTGACACATTTGATGGCTTTAACTCCATATTTGAAAAGCCAAAGA
AGCAACGAAGCGGTGCCATGGAGGACGATTTCGATCGAGATCGGGATCAG
TGGAAGGTCAATACCGACATGGACTCGCAATCGGGCATATGTCCCGCCGA
AAATCCGAATGATGTGAAGTATGAAAAGAAGGATCGCTGCAAGGTTGACA
GGAAGATGGTCAAGGACGAGGACGATGACGAGAATGCCGATCCTGCGGGC
AATAGTGATGACGATGATATCCATGATGGTGATGAAGACAATGGCGATGA
TGAGGCTTATGAAGAGGAGGACGACGACATTAGTTTTGAGGATGAAGCTT
TTGTTTCGAGAATTAACTGTTTGTTGGGATCTCTGCACAAGCACACCAAA
GCCATAACCGATAATCTGCAGATCCTTCAATCCCGCTTGTCAAAAGCGAA
AAATGACAACATATGCAGAAACAACAACCAAGGCACTACGCCTACGGAAC
ATCCTAGTCTGAAATGGTCCAAGAAGCCGGATTTCTATGAGGCAACCGAG
CTGTGTGCTGATGACAACTGCCATTTCGAGGACAGTGTGGATAACAAAGA
GGTCCAGCCACAAGCTTTTACTGAGGATCGTCGAGTGATGGTTCCGCCTC
TATTGCAACTCTTCCATGGTCCTGTCCAGCTGCAAACCACTTTGAACAGC
GGCCAGGACATCACGGGATCAAAGTCGAGATATTGGATGACCTCACCGGA
AACATCAGAGGAGTTTCAGGCTTCATCGCAATTACAGCCGGATGAAAAAA
ATCAAGAACGATACGAGGATTACGATGCTAAATTGCGTCGCCTCATGGAC
AGTCGGGATGAGATCGAGCGAAATGTGATGAGAATGATAACTCCGGATTT
ATAAAATAAATATTGTATGAATATTAATACTTAAAGAGACCCTACAATAA
AGAATAAAACCATTTGTAAAAAAAAAAAAAAAAAA

IP10732.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG12433-RB 1067 CG12433-RB 1..1067 1..1067 5335 100 Plus
CG12433-RC 1307 CG12433-RC 1..974 1..974 4870 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16911849..16912915 1..1067 5245 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:03:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17022304..17023371 1..1068 5340 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17030402..17031469 1..1068 5340 100 Plus
Blast to na_te.dros performed 2019-03-16 13:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 68..131 1064..1002 128 70.8 Minus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 1606..1669 1002..1064 119 69.2 Plus

IP10732.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:06:07 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16911849..16912162 1..314 99 == Plus
chrX 16912294..16912915 446..1067 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:46:59 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 1..984 21..1004 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:44:29 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 1..984 21..1004 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:06:41 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG43996-RA 1..984 21..1004 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:25:47 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 1..984 21..1004 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:09:22 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG43996-RA 1..984 21..1004 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:17:33 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 1..1067 1..1067 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:44:29 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 1..1067 1..1067 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:06:41 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG43996-RA 1..1067 1..1067 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:47 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG12433-RB 1..1067 1..1067 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:09:22 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
CG43996-RA 1..1067 1..1067 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:06:07 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
X 17022304..17023370 1..1067 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:06:07 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
X 17022304..17023370 1..1067 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:06:07 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
X 17022304..17023370 1..1067 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:06:41 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16916337..16917403 1..1067 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:05:36 Download gff for IP10732.complete
Subject Subject Range Query Range Percent Splice Strand
X 17030402..17031468 1..1067 100   Plus

IP10732.pep Sequence

Translation from 20 to 1003

> IP10732.pep
MAWLTKIIIIFILLLHTQLTQLIQYIDDGDTFDGFNSIFEKPKKQRSGAM
EDDFDRDRDQWKVNTDMDSQSGICPAENPNDVKYEKKDRCKVDRKMVKDE
DDDENADPAGNSDDDDIHDGDEDNGDDEAYEEEDDDISFEDEAFVSRINC
LLGSLHKHTKAITDNLQILQSRLSKAKNDNICRNNNQGTTPTEHPSLKWS
KKPDFYEATELCADDNCHFEDSVDNKEVQPQAFTEDRRVMVPPLLQLFHG
PVQLQTTLNSGQDITGSKSRYWMTSPETSEEFQASSQLQPDEKNQERYED
YDAKLRRLMDSRDEIERNVMRMITPDL*

IP10732.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:37:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21737-PA 450 GF21737-PA 57..214 49..203 156 36.7 Plus
Dana\GF21737-PA 450 GF21737-PA 355..443 236..325 153 38.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:37:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19092-PA 410 GG19092-PA 1..326 1..327 1178 71.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG43996-PA 327 CG43996-PA 1..327 1..327 1749 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:37:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13481-PA 378 GM13481-PA 1..268 50..318 1059 83.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17639-PA 431 GE17639-PA 1..321 1..318 1029 69.9 Plus

IP10732.hyp Sequence

Translation from 20 to 1003

> IP10732.hyp
MAWLTKIIIIFILLLHTQLTQLIQYIDDGDTFDGFNSIFEKPKKQRSGAM
EDDFDRDRDQWKVNTDMDSQSGICPAENPNDVKYEKKDRCKVDRKMVKDE
DDDENADPAGNSDDDDIHDGDEDNGDDEAYEEEDDDISFEDEAFVSRINC
LLGSLHKHTKAITDNLQILQSRLSKAKNDNICRNNNQGTTPTEHPSLKWS
KKPDFYEATELCADDNCHFEDSVDNKEVQPQAFTEDRRVMVPPLLQLFHG
PVQLQTTLNSGQDITGSKSRYWMTSPETSEEFQASSQLQPDEKNQERYED
YDAKLRRLMDSRDEIERNVMRMITPDL*

IP10732.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG43996-PA 327 CG43996-PA 1..327 1..327 1749 100 Plus