Clone IP10788 Report

Search the DGRC for IP10788

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:107
Well:88
Vector:pOT2
Associated Gene/Transcriptnatalisin-RC
Protein status:IP10788.pep: gold
Preliminary Size:1104
Sequenced Size:1999

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14842 2005-01-01 Successful iPCR screen
CG34388 2008-04-29 Release 5.5 accounting
CG34388 2008-08-15 Release 5.9 accounting
CG34388 2008-12-18 5.12 accounting

Clone Sequence Records

IP10788.complete Sequence

1999 bp (1999 high quality bases) assembled on 2005-05-04

GenBank Submission: BT023179

> IP10788.complete
CTAAGAGCCAAAAACGCAGCGGATGCCGCGGACTGGCCGCCTGGCTAACT
GGCTTCTTCAAAGTGGCCGACGAGGCTGGAGTGGAGTGAAATAAAAATTG
GCACAACTTCGAGAGACTAAAGTTGGAGTTGGAGTTGCTGTGTCCAAAGT
CGCTCCTCGATCCTCCGACCAAGGCGGCAGACAGCATGAGGCTCACGTTG
GCCTGGCTCAGCCTCTGCCTGGCGATTTATTGCGGCGGTGGCCATGGCCA
TGGCAATGTGGTCCTATCTTTGCCACCATCGCTTATCGCCACGGCCACGA
AGGCGGCCTTGAGCCACCAACGGCAGCAGAAGCAGCAGCAGCAGCATCAG
AAAAAGGATGCACGCGTCCTGTTTGACAGCCCCGCCGATGCACTGCGCGA
TATGATGCACAACGGCAATGGCAATGGCAATGGACCCATGGATTCTGGAA
AATTTAGCCTGTCCGATGTGGAGCAACCAGCAGCGCAGCGCTCTGAGGAT
TTTAATCGAAACGCATATGATTTAGGGGCCAGGCAATCAGCGCCGCAGGA
AATTGCAATGGGAATGGAACTGGGCATGGGTCTGGGTCTGGGGCCCAACA
ACTATCGCACCACGCCCCCTCATCGGTATTGGGGCCAGCGTTGTCAGGGT
CGATCCGGCGGATCTGGAACCAGCAAGTGTCCGCAGGAATACTATCGCAC
CATGCTGGCGGCCAGGAACAAAGAGGCGCTGTCCCGCCTCCACATGCAGC
TGAGTTCGATGCAGGATTCCGATTCTGGGGCCAGCTCCTCCTCGGATTCC
GAGGAGGAACATGTCGACGATGAGGAGCAGAGCAACAACGAGGTCTTCAT
GCTGCTAACTGGCGAACAGGATTTGATGAAGTTTCTGCACTGGGCCATGC
AGGTCCTGTATCCCATTGAACGTCCTTTGGGCAATCTGAGCGATGGAGCT
GCCGAGAACTACTATCCAGGAATGTTTCTCTGGAAGAAACTAAATCTTTC
GGGCCATCTGGAACCCCCACTTATTGTGGATGAGCCCCAGTATGTGCTGG
TACGAAGGGAAAAGCTTTTCGATGGCTATCAATTTGGAGACATGAGCAAG
GAGAACGATCCCTTCATACCGCCTCGAGGTCGCAAGCACAGCGGATCGCT
GGATCTGGACGCCCTGATGAACCGGTACGAACCCTTTGTGCCCAATCGCG
GCAAGCGCGACAAGGTCAAGGATCTGTTCAAGTATGACGACCTGTTCTAT
CCGCATCGCGGCAAAAAGCATCGCAACCTCTTCCAAGTGGACGATCCCTT
CTTTGCCACCCGGGGCAAGAAGCTGCAGCTCCGGGATCTTTACAACGCCG
ACGATCCATTCGTTCCGAATCGCGGCAAGCGGCACTTGACAGCCAGTGCC
GGGAAATTGGGTGAGACGATGGCGGGTGGTGGAAAATGGCCAGATGACAG
CAACAACTACTGGCCGCTAAGAATGTCAACGCATAAAATTAATGGTTACG
ATCAATCAGTCAGGCCATCACTGTCAGTGGAGGATGCTGCTGCATCGTTG
GCTTCTTGGCGACTGCCCGCTAATAGATTGCACTCGACAAGATCAATGTC
AGCCGATCTGCGGCAGCAATTGCTCTTGCCACATGTCCGCTTCATTGGCA
ATCCGAACATGCGCCAGCAGCAGCAGCAGCAGCAGCAGCATCAGGTGAAA
ACCTCATCCTGGCAGGCAGAGGAGCGCCTCCGGAGATCCATCCTGGCCCC
GGGCGAATCAAACGATGCCCACGAGACACAATTAACGCTATCGCACCCGG
CTAATCCACATTTGGTCACCGATACGGACAACCTAAACATTTAAATGCGG
CGAGCGAATTTCGTTTTCGGATTGGATTTATTTGGCTTTTCAGTTTTCGG
CTTGGGGCACTGTTTTCCTCGACTCATGTAGACACAACTATATGGCACAC
AATAAAGTACAGCATGCAATTGATTTTGAGAGAAAAAAAAAAAAAAAAA

IP10788.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:24:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34388-RC 2014 CG34388-RC 15..1999 1..1985 9925 100 Plus
CG34388-RD 2009 CG34388-RD 15..2002 1..1985 9870 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 10245743..10246637 1088..1982 4385 99.3 Plus
chr3R 27901430 chr3R 10243380..10244095 1..716 3565 99.9 Plus
chr3R 27901430 chr3R 10245299..10245675 713..1089 1885 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:03:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14420971..14421868 1088..1985 4490 100 Plus
3R 32079331 3R 14418607..14419322 1..716 3580 100 Plus
3R 32079331 3R 14420527..14420903 713..1089 1885 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:16:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 14161802..14162699 1088..1985 4490 100 Plus
3R 31820162 3R 14159438..14160153 1..716 3580 100 Plus
3R 31820162 3R 14161358..14161734 713..1089 1885 100 Plus
Blast to na_te.dros performed on 2019-03-16 03:44:18 has no hits.

IP10788.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:45:04 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 10243380..10244094 1..715 95 -> Plus
chr3R 10245302..10245675 716..1089 100 -> Plus
chr3R 10245745..10246637 1090..1982 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:47:11 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 1..1659 186..1844 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:44:17 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 1..1659 186..1844 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:03:15 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 1..1659 186..1844 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:25:33 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 1..1659 186..1844 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:13:47 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
natalisin-RC 1..1659 186..1844 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:17:20 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 1..1982 1..1982 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:44:16 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 15..1996 1..1982 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:03:15 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 15..1996 1..1982 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:33 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
CG34388-RC 1..1982 1..1982 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:13:47 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
natalisin-RC 15..1996 1..1982 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:45:04 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14418607..14419321 1..715 100 -> Plus
3R 14420530..14420903 716..1089 100 -> Plus
3R 14420973..14421865 1090..1982 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:45:04 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14418607..14419321 1..715 100 -> Plus
3R 14420530..14420903 716..1089 100 -> Plus
3R 14420973..14421865 1090..1982 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:45:04 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14418607..14419321 1..715 100 -> Plus
3R 14420530..14420903 716..1089 100 -> Plus
3R 14420973..14421865 1090..1982 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:03:15 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10244329..10245043 1..715 100 -> Plus
arm_3R 10246252..10246625 716..1089 100 -> Plus
arm_3R 10246695..10247587 1090..1982 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:05:28 Download gff for IP10788.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14159438..14160152 1..715 100 -> Plus
3R 14161361..14161734 716..1089 100 -> Plus
3R 14161804..14162696 1090..1982 100   Plus

IP10788.pep Sequence

Translation from 185 to 1843

> IP10788.pep
MRLTLAWLSLCLAIYCGGGHGHGNVVLSLPPSLIATATKAALSHQRQQKQ
QQQHQKKDARVLFDSPADALRDMMHNGNGNGNGPMDSGKFSLSDVEQPAA
QRSEDFNRNAYDLGARQSAPQEIAMGMELGMGLGLGPNNYRTTPPHRYWG
QRCQGRSGGSGTSKCPQEYYRTMLAARNKEALSRLHMQLSSMQDSDSGAS
SSSDSEEEHVDDEEQSNNEVFMLLTGEQDLMKFLHWAMQVLYPIERPLGN
LSDGAAENYYPGMFLWKKLNLSGHLEPPLIVDEPQYVLVRREKLFDGYQF
GDMSKENDPFIPPRGRKHSGSLDLDALMNRYEPFVPNRGKRDKVKDLFKY
DDLFYPHRGKKHRNLFQVDDPFFATRGKKLQLRDLYNADDPFVPNRGKRH
LTASAGKLGETMAGGGKWPDDSNNYWPLRMSTHKINGYDQSVRPSLSVED
AAASLASWRLPANRLHSTRSMSADLRQQLLLPHVRFIGNPNMRQQQQQQQ
QHQVKTSSWQAEERLRRSILAPGESNDAHETQLTLSHPANPHLVTDTDNL
NI*

IP10788.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19916-PA 353 GF19916-PA 33..353 220..552 1195 75.4 Plus
Dana\GF19915-PA 169 GF19915-PA 1..169 1..177 444 62.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16855-PA 368 GG16855-PA 35..368 215..552 1555 87.7 Plus
Dere\GG16854-PA 178 GG16854-PA 1..178 1..177 611 82.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17482-PA 379 GH17482-PA 7..356 190..534 900 56.7 Plus
Dgri\GH17481-PA 190 GH17481-PA 1..190 1..177 326 44.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:53
Subject Length Description Subject Range Query Range Score Percent Strand
natalisin-PC 552 CG34388-PC 1..552 1..552 2946 100 Plus
natalisin-PD 553 CG34388-PD 1..553 1..552 2934 99.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22809-PA 328 GI22809-PA 24..323 217..518 901 62.3 Plus
Dmoj\GI22808-PA 198 GI22808-PA 1..198 1..177 251 41.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23508-PA 433 GL23508-PA 1..411 182..544 968 55.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30157-PA 641 GA30157-PA 1..619 1..544 1447 57.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24164-PA 391 GM24164-PA 15..391 172..552 1772 94.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:38:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18961-PA 363 GD18961-PA 1..363 187..552 1863 96.5 Plus
Dsim\GD18960-PA 175 GD18960-PA 1..175 1..177 914 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:38:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22812-PA 387 GJ22812-PA 1..371 192..541 925 58.6 Plus
Dvir\GJ22811-PA 188 GJ22811-PA 1..188 1..177 326 45.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10944-PA 396 GK10944-PA 1..332 187..495 994 66.1 Plus
Dwil\GK19173-PA 185 GK19173-PA 1..185 1..177 379 48.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:38:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24236-PA 381 GE24236-PA 1..381 187..552 1564 88.2 Plus
Dyak\GE24234-PA 191 GE24234-PA 1..191 1..177 593 83.9 Plus

IP10788.hyp Sequence

Translation from 185 to 1843

> IP10788.hyp
MRLTLAWLSLCLAIYCGGGHGHGNVVLSLPPSLIATATKAALSHQRQQKQ
QQQHQKKDARVLFDSPADALRDMMHNGNGNGNGPMDSGKFSLSDVEQPAA
QRSEDFNRNAYDLGARQSAPQEIAMGMELGMGLGLGPNNYRTTPPHRYWG
QRCQGRSGGSGTSKCPQEYYRTMLAARNKEALSRLHMQLSSMQDSDSGAS
SSSDSEEEHVDDEEQSNNEVFMLLTGEQDLMKFLHWAMQVLYPIERPLGN
LSDGAAENYYPGMFLWKKLNLSGHLEPPLIVDEPQYVLVRREKLFDGYQF
GDMSKENDPFIPPRGRKHSGSLDLDALMNRYEPFVPNRGKRDKVKDLFKY
DDLFYPHRGKKHRNLFQVDDPFFATRGKKLQLRDLYNADDPFVPNRGKRH
LTASAGKLGETMAGGGKWPDDSNNYWPLRMSTHKINGYDQSVRPSLSVED
AAASLASWRLPANRLHSTRSMSADLRQQLLLPHVRFIGNPNMRQQQQQQQ
QHQVKTSSWQAEERLRRSILAPGESNDAHETQLTLSHPANPHLVTDTDNL
NI*

IP10788.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
natalisin-PC 552 CG34388-PC 1..552 1..552 2946 100 Plus
natalisin-PD 553 CG34388-PD 1..553 1..552 2934 99.8 Plus