IP10875.complete Sequence
1530 bp (1522 high quality bases) assembled on 2009-09-15
GenBank Submission: BT025106.2
> IP10875.complete
AAAAGCAGTTTTTTTTTTTTTTTTTTTTTCCATAAGGAATCATACTTTTA
CATTTATTATATAACCAAATCTCAAGATTTCTGCAATGGGTAGCGTTTTA
AGTAGATCAGATCAGCCTAGAGATTCTGTCGCCTACAGAAACTTCCTGAC
AGTCTACAGGAATCAGCACAAACAAATGAGTTCCAATGATGCACTTTTGA
GTGCATCACGTGAATGGGGAACTTTATCGCAGGCTCAGCGGAATCGATAT
GCTAACATGAAGGACTCCCCCAAGCGGGGCACAAAAAACATAACGGAGAA
TGCGGCTGCTCGTAGAAAGATTACTAAAAAGAATTCCCGGTCGAAGAGAA
TTTCTCAGCGGCGGATTCAAGATAAGGGGTCTGCTTATAAGCCGCTAACC
CTCAACAGATCTTACGTAATACGGAAGAGTTTGGTTCCCTCAAGAGGCTT
TCTAAACTTAGTGCAGTTCTTCCAAGAGATCCATAGCGAAATGCCAAGAT
CGTTGGCCGTGAAAGAGGCTGTTAGTTCCTGGTGCGCTATGAATGCGGAT
CAGCGTGGCATTTTCATATCAGACTTATAGTCATCATGTCACCCACTTCA
CTCAATCAATGCCCCCCACGCATGGCCGCCTGTCACGAGAGAATCCAATT
TCGAATCAAGCTTAGCCAAGCGGTTACACAATCGCCGTAAGTTCCGCGCC
CAAACACATGTATTCCATCACGCAACCAGCGGCACGAAATTTCAGAGCAA
CAGTATTAAAATTATAAGCAGGAGGAGCAGGAATAGAAACAGAAACAGAA
CCACAATCATTCACATTTAAATTAACATTTCCCGCCGACGATTATCCTAA
TTGCGAGCTGGCCTTAGCCTAGTCGCTCGTCCTGGCCAAAGATGTTGAAT
ATGCGCCGCTTTCCATTCACTATTTACATTCATGTCGGTGACACGCGGCA
CGCGAGATTCTGCTAAAAAATGGATTCAATGTAACGCAAAACAAGCGAGG
CCTCATAAAAATGAAATGCGGATAAATCAAATTAGCATTTTGTACAAATA
GCAAAGCATTAGCTCGCGTACGGCGGCAATTTGTAATGTCAGAAGGCCGC
AAGGAGTCTTGAGGAGAGGGTCCTGGAAAAAGGACATGCAAGCAGTTCGC
TTTGGAGGTCATGCCCAAAAGTCAAAAAGATTGTATAATTACTCGGGAAC
CATTTCGGTGAGACTTCTTCTTCAGATGTTGCAAGACCACAATCCCGAAA
TGAGAATTAAAACTAATGACACAAGCCGCAGCCAGACATCCCGATCCAAT
TAGGCTCCTCCTGTGGCCAGGATAACCATTCTAGGGCTACAGTAGTATCA
GGTCAAATTCACTGCTCCGACTAGCAAATGTTCGTGTTTTACTACGGCGA
CTTTATTGCAACACAATGGTATTTTAAGTGGCAGCAATAAAAATGATTTA
TTACCCCACAGAGGCGACCATCGAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
IP10875.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tpl94D.b | 1563 | Tpl94D.b | 4..1478 | 1..1476 | 7340 | 99.9 | Plus |
Tpl94D-RA | 1094 | Tpl94D-RA | 4..1094 | 1..1092 | 5420 | 99.9 | Plus |
Tpl94D.a | 1090 | Tpl94D.a | 3..1090 | 1..1092 | 5350 | 99.6 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 18790086..18791300 | 259..1473 | 6030 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 18789761..18790018 | 1..259 | 1215 | 98.8 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:03:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22966628..22967845 | 259..1476 | 6090 | 100 | Plus |
3R | 32079331 | 3R | 22966311..22966560 | 10..259 | 1250 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:36:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 22707459..22708676 | 259..1476 | 6090 | 100 | Plus |
3R | 31820162 | 3R | 22707134..22707391 | 1..259 | 1255 | 99.6 | Plus |
Blast to na_te.dros performed on 2019-03-16 17:55:04 has no hits.
IP10875.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:55:50 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 18789796..18790018 | 37..259 | 99 | -> | Plus |
chr3R | 18790087..18791300 | 260..1473 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:54:21 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31281-RA | 1..495 | 86..580 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:12:17 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tpl94D-RA | 1..495 | 86..580 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:41:39 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tpl94D-RA | 1..495 | 86..580 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 16:32:11 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:22:44 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tpl94D-RA | 1..495 | 86..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-15 12:33:52 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31281-RA | 3..1093 | 1..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:12:17 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tpl94D-RA | 3..1093 | 1..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:39 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tpl94D-RA | 20..1491 | 1..1473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:11 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31281-RA | 31..1093 | 439..1501 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:22:44 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tpl94D-RA | 20..1491 | 1..1473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:50 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22966303..22966560 | 1..259 | 99 | -> | Plus |
3R | 22966629..22967842 | 260..1473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:50 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22966303..22966560 | 1..259 | 99 | -> | Plus |
3R | 22966629..22967842 | 260..1473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:50 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22966303..22966560 | 1..259 | 99 | -> | Plus |
3R | 22966629..22967842 | 260..1473 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:39 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18792025..18792282 | 1..259 | 99 | -> | Plus |
arm_3R | 18792351..18793564 | 260..1473 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:03:15 Download gff for
IP10875.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22707134..22707391 | 1..259 | 99 | -> | Plus |
3R | 22707460..22708673 | 260..1473 | 100 | | Plus |
IP10875.pep Sequence
Translation from 85 to 579
> IP10875.pep
MGSVLSRSDQPRDSVAYRNFLTVYRNQHKQMSSNDALLSASREWGTLSQA
QRNRYANMKDSPKRGTKNITENAAARRKITKKNSRSKRISQRRIQDKGSA
YKPLTLNRSYVIRKSLVPSRGFLNLVQFFQEIHSEMPRSLAVKEAVSSWC
AMNADQRGIFISDL*
IP10875.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19889-PA | 79 | GF19889-PA | 1..68 | 1..67 | 149 | 45.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG11172-PA | 175 | GG11172-PA | 1..175 | 1..164 | 480 | 54 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tpl94D-PA | 164 | CG31281-PA | 1..164 | 1..164 | 828 | 100 | Plus |
Tpl94D-PB | 163 | CG31281-PB | 1..163 | 1..164 | 811 | 99.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:01:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26474-PA | 167 | GM26474-PA | 1..167 | 1..164 | 653 | 77.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:01:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20990-PA | 167 | GD20990-PA | 1..167 | 1..164 | 651 | 77.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:01:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10340-PA | 187 | GE10340-PA | 1..187 | 1..164 | 416 | 52.4 | Plus |
IP10875.hyp Sequence
Translation from 85 to 579
> IP10875.hyp
MGSVLSRSDQPRDSVAYRNFLTVYRNQHKQMSSNDALLSASREWGTLSQA
QRNRYANMKDSPKRGTKNITENAAARRKITKKNSRSKRISQRRIQDKGSA
YKPLTLNRSYVIRKSLVPSRGFLNLVQFFQEIHSEMPRSLAVKEAVSSWC
AMNADQRGIFISDL*
IP10875.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:33:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tpl94D-PA | 164 | CG31281-PA | 1..164 | 1..164 | 828 | 100 | Plus |
Tpl94D-PB | 163 | CG31281-PB | 1..163 | 1..164 | 811 | 99.4 | Plus |