Clone IP10922 Report

Search the DGRC for IP10922

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:109
Well:22
Vector:pOT2
Associated Gene/TranscriptCda9-RA
Protein status:IP10922.pep: gold
Preliminary Size:1194
Sequenced Size:1656

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15918 2005-01-01 Successful iPCR screen
CG15918 2008-04-29 Picked prior to 5.5
CG15918 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

IP10922.complete Sequence

1656 bp assembled on 2009-06-15

GenBank Submission: BT088821.1

> IP10922.complete
CGCCCATCGATTGCGATCTCCGGCAAGTGTGAAAAGTTTTCCACTTCAAC
TCGGCAAATCTCAGCTGCTAAGTTCCTTGGTTATGCTAATGAGACAAACT
TTGGCCACTCCGAGATCGTTGGCATGTCTATAATTGAAAGTTTTGTCTCT
TTTTGGTTGAATGAAGTTGGTATTGCTCTGCGGATGAAACAAGGTCACTT
GAGGAAACCCCACCCAATTGAGCCACACCTTGTGCTGAACAAGCAAATCA
TATTTGGAGCCCCAAGAAACCGATAAGATATCACTTTTCCCTGAAGGTTA
TAAGAAGACCATCGAGCATCGATGGCTGAGCATAGAGTTCTTTCTAGGCC
GGCATGAAGTACTCTACCTTGCTAATTCTGGGCCTAATTTTGACCGTGGC
TCTCATGAGCGAGGCCAAGTCCAAGTCCAAAAAGCAGAAGAATAAGCAGA
ATGGAATCCTGCCAATGGCCGAACCCTGCAAACCCAGCAAGTGCAAATTA
CCCGATTGCCGCTGCTCCGATGCCGCTTTACCCACATCCAAGTTCCAGGG
CAAGGAGAACCAGATTCCGCAGTTCGTGACCATCACTTTCGATGACGCTG
TAAATGCTGTCAACTTTGCCCAGTACGAGCTGCTTTTCGATGGATTAATC
AATCCAGATGGTTGTGGAGCCGCCGGTACCTTCTTTTTGTCCCACGAATA
CACGGATTACGTGAGGGTGAATGCACTCTATAGGGCCGGTCACGAGATAG
CCCTACATTCGGTGACCCATGGAGATGGCACCGATTACTGGCGTTCAGCT
GATGTTCCGACCATCGAGCGAGAGTTTGGAGCGCAGCTCAAAATGTTAGA
GACCTTTGCCAAAGTAAATCCCAAGAAGATACAGGGAATGCGCCTGCCGT
TCCTCCAAATTTCGGGCAATAACACCTTTGAAGCAGCCCGTCGCTTGGGC
TTGACCTACGACAGTTCCTGGCCAACGCAAAAGTTCAAGGATCCGGCCAT
GTGGCCGTACACCCTGGACTACAAGTCTAAGCAGGACTGTCAAATAGGCC
CCTGTCCAGAGGCATCCATTCCCGGATTCTGGGTGAATCCCATGGTCACG
TGGACCGATACTGAGGGCTACAGTTGCTCCATGATCGATGCTTGCGTTTA
CCCGCCGGAGGACGATATGGACGAGCTGTTCGACTGGATGATGGAGAACT
TCAATAGGCACTATCTTGGCAATAGAGCACCCTTCGGGATGTATCTGCAT
GCTGCGTGGTTTTCGCGGGGTCGCAATTACTTTGGTGCCTTTAAAAAATT
CATTAACCACCTGAACACCTATTCGGATGTGTATTTCACCGGAATTTCGC
GAATGTTGGAGTACGTGAGAAAGCCGACGCTGGGCTCCCCGTTCAAGGAC
TGTCCCGATTTGCCGGAGGCGGAGTGTCGAGCGGTCCAGTGCCACGTCCA
AAAGATGTCCACCGGCGAGGAGCGCTACATGACCGTATGCGACAAGTGCC
CGTCCGTCTATCCCTGGCTGGACAATCCTCTGGGTCAGCAGCTCTAAGCC
CGCCAGACATTCGCGCATAAAGCGTGTACACTGAAAAAAATAAAATGATA
TTTTTGAATAGAAAAATAGGTCTCTGCTTGGTCATGCAAAAAAAAAAAAA
AAAAAA

IP10922.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
Cda9-RA 1654 Cda9-RA 1..1640 1..1640 8200 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13016373..13017100 570..1297 3475 98.5 Plus
chr2R 21145070 chr2R 13015698..13016269 1..572 2770 99 Plus
chr2R 21145070 chr2R 13017209..13017547 1298..1636 1665 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:03:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:53:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17129155..17129882 570..1297 3640 100 Plus
2R 25286936 2R 17128480..17129051 1..572 2860 100 Plus
2R 25286936 2R 17129995..17130337 1298..1640 1715 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17130354..17131081 570..1297 3640 100 Plus
2R 25260384 2R 17129679..17130250 1..572 2860 100 Plus
2R 25260384 2R 17131194..17131536 1298..1640 1715 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:53:28 has no hits.

IP10922.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:54:35 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13015698..13016269 1..572 98 -> Plus
chr2R 13016376..13017100 573..1297 98 -> Plus
chr2R 13017209..13017547 1298..1637 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:33 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15918-RA 1..1194 354..1547 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:57 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
Cda9-RA 1..1194 354..1547 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:34:30 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
Cda9-RA 1..1194 354..1547 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:03:35 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
Cda9-RA 1..1194 354..1547 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-15 16:45:42 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
CG15918-RA 1..1263 354..1616 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:57 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
Cda9-RA 1..1284 354..1637 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:34:30 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
Cda9-RB 1..1637 1..1637 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:03:35 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
Cda9-RB 1..1637 1..1637 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:35 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17128480..17129051 1..572 100 -> Plus
2R 17129158..17129882 573..1297 100 -> Plus
2R 17129995..17130334 1298..1637 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:35 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17128480..17129051 1..572 100 -> Plus
2R 17129158..17129882 573..1297 100 -> Plus
2R 17129995..17130334 1298..1637 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:35 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17128480..17129051 1..572 100 -> Plus
2R 17129158..17129882 573..1297 100 -> Plus
2R 17129995..17130334 1298..1637 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:34:30 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13015985..13016556 1..572 100 -> Plus
arm_2R 13016663..13017387 573..1297 100 -> Plus
arm_2R 13017500..13017839 1298..1637 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:28 Download gff for IP10922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17129679..17130250 1..572 100 -> Plus
2R 17130357..17131081 573..1297 100 -> Plus
2R 17131194..17131533 1298..1637 100   Plus

IP10922.pep Sequence

Translation from 353 to 1546

> IP10922.pep
MKYSTLLILGLILTVALMSEAKSKSKKQKNKQNGILPMAEPCKPSKCKLP
DCRCSDAALPTSKFQGKENQIPQFVTITFDDAVNAVNFAQYELLFDGLIN
PDGCGAAGTFFLSHEYTDYVRVNALYRAGHEIALHSVTHGDGTDYWRSAD
VPTIEREFGAQLKMLETFAKVNPKKIQGMRLPFLQISGNNTFEAARRLGL
TYDSSWPTQKFKDPAMWPYTLDYKSKQDCQIGPCPEASIPGFWVNPMVTW
TDTEGYSCSMIDACVYPPEDDMDELFDWMMENFNRHYLGNRAPFGMYLHA
AWFSRGRNYFGAFKKFINHLNTYSDVYFTGISRMLEYVRKPTLGSPFKDC
PDLPEAECRAVQCHVQKMSTGEERYMTVCDKCPSVYPWLDNPLGQQL*

IP10922.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11443-PA 400 GF11443-PA 38..399 35..396 1808 87 Plus
Dana\GF14860-PA 2966 GF14860-PA 2631..2946 71..388 633 41.7 Plus
Dana\GF15357-PA 589 GF15357-PA 223..587 39..394 585 35.6 Plus
Dana\GF10715-PA 543 GF10715-PA 170..539 39..394 548 33.2 Plus
Dana\GF10716-PA 570 GF10716-PA 163..565 10..394 510 32 Plus
Dana\GF14860-PA 2966 GF14860-PA 2493..2591 39..138 212 42.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20664-PA 403 GG20664-PA 1..403 1..397 1922 90.8 Plus
Dere\GG24688-PA 2755 GG24688-PA 2391..2735 39..388 664 40.8 Plus
Dere\GG22766-PA 576 GG22766-PA 210..574 39..394 589 36.4 Plus
Dere\GG13377-PA 541 GG13377-PA 168..537 39..394 545 33.5 Plus
Dere\GG13378-PA 594 GG13378-PA 187..589 10..394 513 32.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:02:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21012-PA 398 GH21012-PA 1..398 1..397 1727 77.1 Plus
Dgri\GH10059-PA 2785 GH10059-PA 2450..2765 71..388 633 41.7 Plus
Dgri\GH11561-PA 532 GH11561-PA 164..530 39..394 573 36.1 Plus
Dgri\GH14613-PA 539 GH14613-PA 166..535 39..394 543 32.7 Plus
Dgri\GH12870-PA 490 GH12870-PA 98..462 39..394 510 32.4 Plus
Dgri\GH10059-PA 2785 GH10059-PA 2351..2449 39..138 212 45.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
Cda9-PB 397 CG15918-PB 1..397 1..397 2180 100 Plus
Cda9-PA 397 CG15918-PA 1..397 1..397 2180 100 Plus
Cda5-PE 1040 CG31973-PE 675..1020 39..388 687 41.8 Plus
Cda5-PH 891 CG31973-PH 527..871 39..388 666 40.8 Plus
Cda5-PA 1039 CG31973-PA 675..1019 39..388 666 40.8 Plus
Cda5-PF 1562 CG31973-PF 1198..1542 39..388 666 40.8 Plus
Cda5-PG 1790 CG31973-PG 1426..1770 39..388 666 40.8 Plus
Cda5-PI 1850 CG31973-PI 1486..1830 39..388 666 40.8 Plus
Cda5-PJ 1890 CG31973-PJ 1526..1870 39..388 666 40.8 Plus
Cda5-PB 1998 CG31973-PB 1634..1978 39..388 666 40.8 Plus
ChLD3-PA 577 CG17905-PA 211..575 39..394 598 35.8 Plus
serp-PC 541 CG32209-PC 168..537 39..394 546 33.6 Plus
serp-PB 541 CG32209-PB 168..537 39..394 546 33.6 Plus
Cda4-PA 486 CG32499-PA 98..462 39..394 522 32.9 Plus
verm-PG 525 CG8756-PG 151..520 39..394 512 32.6 Plus
verm-PH 531 CG8756-PH 157..526 39..394 512 32.6 Plus
verm-PI 555 CG8756-PI 181..550 39..394 512 32.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18607-PA 412 GI18607-PA 47..412 32..397 1646 78.7 Plus
Dmoj\GI16440-PA 2964 GI16440-PA 2629..2944 71..388 634 41.7 Plus
Dmoj\GI17052-PA 532 GI17052-PA 164..530 39..394 591 37.2 Plus
Dmoj\GI13501-PA 538 GI13501-PA 165..534 39..394 555 33.2 Plus
Dmoj\GI14970-PA 490 GI14970-PA 98..462 39..394 519 33.8 Plus
Dmoj\GI16440-PA 2964 GI16440-PA 2530..2628 39..138 196 41.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17237-PA 410 GL17237-PA 1..410 1..397 1767 78 Plus
Dper\GL13911-PA 2661 GL13911-PA 2295..2639 39..388 664 40.8 Plus
Dper\GL18781-PA 588 GL18781-PA 222..586 39..394 592 35.3 Plus
Dper\GL20872-PA 735 GL20872-PA 403..730 82..394 428 31.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14025-PA 410 GA14025-PA 1..410 1..397 1775 77.8 Plus
Dpse\GA22234-PA 410 GA22234-PA 1..410 1..397 1761 78.3 Plus
Dpse\GA16591-PA 3051 GA16591-PA 2685..3029 39..388 665 40.8 Plus
Dpse\GA14716-PA 588 GA14716-PA 222..586 39..394 592 35.3 Plus
Dpse\GA16758-PA 541 GA16758-PA 168..537 39..394 549 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21760-PA 403 GM21760-PA 37..403 31..397 1936 95.1 Plus
Dsec\GM16705-PA 1041 GM16705-PA 677..1021 39..388 661 40.8 Plus
Dsec\GM17200-PA 577 GM17200-PA 211..575 39..394 584 35.8 Plus
Dsec\GM16731-PA 594 GM16731-PA 187..589 10..394 514 32.3 Plus
Dsec\GM11719-PA 486 GM11719-PA 98..462 39..394 513 32.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11251-PA 403 GD11251-PA 1..403 1..397 2085 95 Plus
Dsim\GD22994-PA 2117 GD22994-PA 1782..2097 71..388 637 42 Plus
Dsim\GD24077-PA 577 GD24077-PA 211..575 39..394 584 35.8 Plus
Dsim\GD12255-PA 541 GD12255-PA 168..537 39..394 543 33.3 Plus
Dsim\GD12256-PA 594 GD12256-PA 187..589 10..394 513 32.3 Plus
Dsim\GD22994-PA 2117 GD22994-PA 1683..1781 39..138 238 48 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21623-PA 397 GJ21623-PA 1..397 1..397 1685 77.6 Plus
Dvir\GJ16215-PA 2766 GJ16215-PA 2400..2744 39..388 661 40.5 Plus
Dvir\GJ17302-PA 527 GJ17302-PA 159..525 39..394 593 37.2 Plus
Dvir\GJ11862-PA 539 GJ11862-PA 166..535 39..394 552 33.4 Plus
Dvir\GJ11863-PA 570 GJ11863-PA 163..565 10..394 506 31.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17872-PA 397 GK17872-PA 17..397 16..395 1653 79.3 Plus
Dwil\GK21092-PA 1086 GK21092-PA 749..1066 69..388 637 41.8 Plus
Dwil\GK18229-PA 605 GK18229-PA 239..603 39..394 612 37.6 Plus
Dwil\GK25738-PA 540 GK25738-PA 167..536 39..394 554 33.6 Plus
Dwil\GK25749-PA 569 GK25749-PA 195..564 39..394 510 33.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:02:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11649-PA 403 GE11649-PA 41..403 35..397 1937 95.9 Plus
Dyak\GE16505-PA 1036 GE16505-PA 672..1016 39..388 657 40.8 Plus
Dyak\GE12760-PA 576 GE12760-PA 210..574 39..394 590 36.4 Plus
Dyak\GE22470-PA 999 GE22470-PA 626..995 39..394 545 33.3 Plus
Dyak\GE22474-PA 405 GE22474-PA 31..400 39..394 513 33.5 Plus

IP10922.hyp Sequence

Translation from 353 to 1546

> IP10922.hyp
MKYSTLLILGLILTVALMSEAKSKSKKQKNKQNGILPMAEPCKPSKCKLP
DCRCSDAALPTSKFQGKENQIPQFVTITFDDAVNAVNFAQYELLFDGLIN
PDGCGAAGTFFLSHEYTDYVRVNALYRAGHEIALHSVTHGDGTDYWRSAD
VPTIEREFGAQLKMLETFAKVNPKKIQGMRLPFLQISGNNTFEAARRLGL
TYDSSWPTQKFKDPAMWPYTLDYKSKQDCQIGPCPEASIPGFWVNPMVTW
TDTEGYSCSMIDACVYPPEDDMDELFDWMMENFNRHYLGNRAPFGMYLHA
AWFSRGRNYFGAFKKFINHLNTYSDVYFTGISRMLEYVRKPTLGSPFKDC
PDLPEAECRAVQCHVQKMSTGEERYMTVCDKCPSVYPWLDNPLGQQL*

IP10922.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:33:38
Subject Length Description Subject Range Query Range Score Percent Strand
Cda9-PB 397 CG15918-PB 1..397 1..397 2180 100 Plus
Cda9-PA 397 CG15918-PA 1..397 1..397 2180 100 Plus
Cda5-PE 1040 CG31973-PE 675..1020 39..388 687 41.8 Plus
Cda5-PH 891 CG31973-PH 527..871 39..388 666 40.8 Plus
Cda5-PA 1039 CG31973-PA 675..1019 39..388 666 40.8 Plus