Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP10932.complete Sequence
1155 bp (1155 high quality bases) assembled on 2006-01-26
GenBank Submission: BT024324
> IP10932.complete
CCACATCGAAATTTCTAGTTAAAAAAAACTGAGAGCGACGGATCGAAAAA
GAGATTGAGATTTGTTTAGCCAAAATAGCGAAATTATGCCCAAGTCCAAG
CAGAGATCGCCAATAAAAGCGGCTACAAAACCGCTTAGCACAAAGAAGCT
ACAGTCCAAAGTCAAAAGTGTCGGTAAGACCAAGCCGAAAATGCAGCAGA
AATCCGTAAAGCAACCGCTCAAGAAACCCATGAGACGATCTCCGCTGATG
CGAGCCGCCCTCCAGCCCACCATTTTGGGCTTGGCCAAGGAAAAGCCGGT
GAAAAAGTCGCGGGTGACCTTCAAGAAGTCACATCGTCGGCCGCTGGACG
CCATGCAATCCCTTGGGATGTCCCGCAGGACCAGACTCATAGACGCCAGT
CCCCAGAGAAAGGCCAAGGGTACTTCGGTACTGTTCCTGGGTAAGGATTC
AAGGACCACCAAGATGCCCAAGAAAATGAAGCCCTCAAGCGAAAAGCCTG
CAAGCGAAAAAAATCAGTTACCCCGGTTAAAAAGACGGATGGAATTCCGA
GTAATGACGAAAGCCGAGACTAGGGCTACCGACGGCGTGAACTTCTTCTG
CAATCTCGGCGTAAAGATGCAGCCACCGGTGACTCGGAAATATCAACAGC
TGCAACAACGAGGTGAAGCAGGATTTGAGGGAAGATTGGCAGGTGGAGAA
GGTACTAGACCGGGTGACGGCGCCTTGCGGAGACCAGTGAGAACCCAGCC
ATCTGGTCTGTCATCCCTAGTCGGTAAAGTCGCCGGTATCGGTGCGTTCG
CCAATGATGTGCTGGTCCCGCTGACCGGCCGGTTGCCCATCATCGACTTT
ATCTCTACCAAAGAGTTCCAGAATATGTCTGCCGCTTCGAAATGGAAGCC
GCACTCGCGGAAAAATACCCATTTATAGACGACCAGAGAGAGTGGCGAGT
GCTTAATGATTAGTGACGAGTGGATATGTATACAATTGGTAAAACGCTTT
TGCGGCTTTGTCATCCTTTAATTTTCAAGTCTTATTTATCCGTAAATTTA
ATGGATTTTTATTATTTTCTTCCCCAAATACAAAAAAAAAAAAAAATATT
ATAATACAAGACAAGTGCACATCGCACATAATAAGAAAAAAAAAAAAAAA
AAAAA
IP10932.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:18:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1722-RA | 1173 | CG1722-RA | 39..1173 | 1..1135 | 5675 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 21115133..21116267 | 1135..1 | 5675 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:04:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21249974..21251110 | 1137..1 | 5685 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:11:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 21235066..21236202 | 1137..1 | 5685 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 18:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6837..6900 | 1072..1134 | 129 | 71.2 | Plus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 5548..5635 | 1083..998 | 128 | 65.2 | Minus |
Dvir\Penelope | 4158 | Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). | 3218..3265 | 1122..1073 | 118 | 76 | Minus |
IP10932.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:02:34 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 21115133..21116267 | 1..1135 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:47:45 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 1..843 | 86..928 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:07 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 1..843 | 86..928 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:52:48 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 1..843 | 86..928 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:07:13 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 1..843 | 86..928 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:46 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 1..843 | 86..928 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:04:33 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 39..1173 | 1..1135 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:07 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 39..1173 | 1..1135 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:52:48 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 39..1173 | 1..1135 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:07:13 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 39..1173 | 1..1135 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:46 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1722-RA | 39..1173 | 1..1135 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:34 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21249976..21251110 | 1..1135 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:34 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21249976..21251110 | 1..1135 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:34 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21249976..21251110 | 1..1135 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:52:48 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21121003..21122137 | 1..1135 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:57:40 Download gff for
IP10932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21235068..21236202 | 1..1135 | 100 | | Minus |
IP10932.pep Sequence
Translation from 85 to 927
> IP10932.pep
MPKSKQRSPIKAATKPLSTKKLQSKVKSVGKTKPKMQQKSVKQPLKKPMR
RSPLMRAALQPTILGLAKEKPVKKSRVTFKKSHRRPLDAMQSLGMSRRTR
LIDASPQRKAKGTSVLFLGKDSRTTKMPKKMKPSSEKPASEKNQLPRLKR
RMEFRVMTKAETRATDGVNFFCNLGVKMQPPVTRKYQQLQQRGEAGFEGR
LAGGEGTRPGDGALRRPVRTQPSGLSSLVGKVAGIGAFANDVLVPLTGRL
PIIDFISTKEFQNMSAASKWKPHSRKNTHL*
IP10932.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:09:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17549-PA | 286 | GG17549-PA | 1..286 | 1..280 | 933 | 70.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1722-PA | 280 | CG1722-PA | 1..280 | 1..280 | 1420 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:09:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22633-PA | 282 | GM22633-PA | 1..282 | 1..280 | 1255 | 88.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:09:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15309-PA | 288 | GE15309-PA | 1..288 | 1..280 | 967 | 73.6 | Plus |
IP10932.hyp Sequence
Translation from 85 to 927
> IP10932.hyp
MPKSKQRSPIKAATKPLSTKKLQSKVKSVGKTKPKMQQKSVKQPLKKPMR
RSPLMRAALQPTILGLAKEKPVKKSRVTFKKSHRRPLDAMQSLGMSRRTR
LIDASPQRKAKGTSVLFLGKDSRTTKMPKKMKPSSEKPASEKNQLPRLKR
RMEFRVMTKAETRATDGVNFFCNLGVKMQPPVTRKYQQLQQRGEAGFEGR
LAGGEGTRPGDGALRRPVRTQPSGLSSLVGKVAGIGAFANDVLVPLTGRL
PIIDFISTKEFQNMSAASKWKPHSRKNTHL*
IP10932.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:33:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1722-PA | 280 | CG1722-PA | 1..280 | 1..280 | 1420 | 100 | Plus |