Clone IP10932 Report

Search the DGRC for IP10932

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:109
Well:32
Vector:pOT2
Associated Gene/TranscriptCG1722-RA
Protein status:IP10932.pep: gold
Preliminary Size:966
Sequenced Size:1155

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1722 2005-01-01 Successful iPCR screen
CG1722 2008-04-29 Release 5.5 accounting
CG1722 2008-08-15 Release 5.9 accounting
CG1722 2008-12-18 5.12 accounting

Clone Sequence Records

IP10932.complete Sequence

1155 bp (1155 high quality bases) assembled on 2006-01-26

GenBank Submission: BT024324

> IP10932.complete
CCACATCGAAATTTCTAGTTAAAAAAAACTGAGAGCGACGGATCGAAAAA
GAGATTGAGATTTGTTTAGCCAAAATAGCGAAATTATGCCCAAGTCCAAG
CAGAGATCGCCAATAAAAGCGGCTACAAAACCGCTTAGCACAAAGAAGCT
ACAGTCCAAAGTCAAAAGTGTCGGTAAGACCAAGCCGAAAATGCAGCAGA
AATCCGTAAAGCAACCGCTCAAGAAACCCATGAGACGATCTCCGCTGATG
CGAGCCGCCCTCCAGCCCACCATTTTGGGCTTGGCCAAGGAAAAGCCGGT
GAAAAAGTCGCGGGTGACCTTCAAGAAGTCACATCGTCGGCCGCTGGACG
CCATGCAATCCCTTGGGATGTCCCGCAGGACCAGACTCATAGACGCCAGT
CCCCAGAGAAAGGCCAAGGGTACTTCGGTACTGTTCCTGGGTAAGGATTC
AAGGACCACCAAGATGCCCAAGAAAATGAAGCCCTCAAGCGAAAAGCCTG
CAAGCGAAAAAAATCAGTTACCCCGGTTAAAAAGACGGATGGAATTCCGA
GTAATGACGAAAGCCGAGACTAGGGCTACCGACGGCGTGAACTTCTTCTG
CAATCTCGGCGTAAAGATGCAGCCACCGGTGACTCGGAAATATCAACAGC
TGCAACAACGAGGTGAAGCAGGATTTGAGGGAAGATTGGCAGGTGGAGAA
GGTACTAGACCGGGTGACGGCGCCTTGCGGAGACCAGTGAGAACCCAGCC
ATCTGGTCTGTCATCCCTAGTCGGTAAAGTCGCCGGTATCGGTGCGTTCG
CCAATGATGTGCTGGTCCCGCTGACCGGCCGGTTGCCCATCATCGACTTT
ATCTCTACCAAAGAGTTCCAGAATATGTCTGCCGCTTCGAAATGGAAGCC
GCACTCGCGGAAAAATACCCATTTATAGACGACCAGAGAGAGTGGCGAGT
GCTTAATGATTAGTGACGAGTGGATATGTATACAATTGGTAAAACGCTTT
TGCGGCTTTGTCATCCTTTAATTTTCAAGTCTTATTTATCCGTAAATTTA
ATGGATTTTTATTATTTTCTTCCCCAAATACAAAAAAAAAAAAAAATATT
ATAATACAAGACAAGTGCACATCGCACATAATAAGAAAAAAAAAAAAAAA
AAAAA

IP10932.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-RA 1173 CG1722-RA 39..1173 1..1135 5675 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 21115133..21116267 1135..1 5675 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:04:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21249974..21251110 1137..1 5685 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 21235066..21236202 1137..1 5685 100 Minus
Blast to na_te.dros performed 2019-03-15 18:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6837..6900 1072..1134 129 71.2 Plus
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 5548..5635 1083..998 128 65.2 Minus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 3218..3265 1122..1073 118 76 Minus

IP10932.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:02:34 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 21115133..21116267 1..1135 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:47:45 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 1..843 86..928 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:07 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 1..843 86..928 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:52:48 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 1..843 86..928 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:07:13 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 1..843 86..928 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:46 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 1..843 86..928 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:04:33 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 39..1173 1..1135 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:07 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 39..1173 1..1135 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:52:48 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 39..1173 1..1135 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:07:13 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 39..1173 1..1135 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:46 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
CG1722-RA 39..1173 1..1135 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:34 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
X 21249976..21251110 1..1135 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:34 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
X 21249976..21251110 1..1135 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:34 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
X 21249976..21251110 1..1135 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:52:48 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21121003..21122137 1..1135 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:57:40 Download gff for IP10932.complete
Subject Subject Range Query Range Percent Splice Strand
X 21235068..21236202 1..1135 100   Minus

IP10932.pep Sequence

Translation from 85 to 927

> IP10932.pep
MPKSKQRSPIKAATKPLSTKKLQSKVKSVGKTKPKMQQKSVKQPLKKPMR
RSPLMRAALQPTILGLAKEKPVKKSRVTFKKSHRRPLDAMQSLGMSRRTR
LIDASPQRKAKGTSVLFLGKDSRTTKMPKKMKPSSEKPASEKNQLPRLKR
RMEFRVMTKAETRATDGVNFFCNLGVKMQPPVTRKYQQLQQRGEAGFEGR
LAGGEGTRPGDGALRRPVRTQPSGLSSLVGKVAGIGAFANDVLVPLTGRL
PIIDFISTKEFQNMSAASKWKPHSRKNTHL*

IP10932.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17549-PA 286 GG17549-PA 1..286 1..280 933 70.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-PA 280 CG1722-PA 1..280 1..280 1420 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22633-PA 282 GM22633-PA 1..282 1..280 1255 88.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15309-PA 288 GE15309-PA 1..288 1..280 967 73.6 Plus

IP10932.hyp Sequence

Translation from 85 to 927

> IP10932.hyp
MPKSKQRSPIKAATKPLSTKKLQSKVKSVGKTKPKMQQKSVKQPLKKPMR
RSPLMRAALQPTILGLAKEKPVKKSRVTFKKSHRRPLDAMQSLGMSRRTR
LIDASPQRKAKGTSVLFLGKDSRTTKMPKKMKPSSEKPASEKNQLPRLKR
RMEFRVMTKAETRATDGVNFFCNLGVKMQPPVTRKYQQLQQRGEAGFEGR
LAGGEGTRPGDGALRRPVRTQPSGLSSLVGKVAGIGAFANDVLVPLTGRL
PIIDFISTKEFQNMSAASKWKPHSRKNTHL*

IP10932.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG1722-PA 280 CG1722-PA 1..280 1..280 1420 100 Plus