Clone IP11002 Report

Search the DGRC for IP11002

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:110
Well:2
Vector:pOT2
Associated Gene/TranscriptCG15256-RB
Protein status:IP11002.pep: gold
Preliminary Size:1158
Sequenced Size:725

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15256 2005-01-01 Successful iPCR screen
CG15256 2008-04-29 Picked prior to 5.5
CG15256 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

IP11002.complete Sequence

725 bp assembled on 2009-07-20

GenBank Submission: BT088931.1

> IP11002.complete
TCAAAATGGCCTGCAAAAAGAAAACCAAACTGTGGGAACCAATGACCAAG
GATGAATTGAAGTCCACCACACAGGCGATGCTCGAGGAGGGCGCCAGGGG
TTTAAGGACGATTTCTACGCAGCAGAAAAAGCTGGTCAACTTTCAGTCGT
TCAACATGGATGATCCCCGTTACGGCATTTCCCTAATCGAGGACAACATG
GAACCGCCCATGTTGTCGAGCTACACAAGGCAATACTCCCAGCCGTATCC
AAATCGTTGTAAGCCCTTTGTTCAAAAGACGGAAACACCAGATCCCATAT
TCAATCGAAGGCCGAAAAACGATTTTGAGTTTACCACAGGACTGGATTTT
AAGTTTCTTGATGATCACATGCACAATCTTTCCGAATCACGCAAGAAAGT
CAACTTCTTCCGGCAACTGAGGAATCAATCATTTCTTCTGTATTGACATG
GTTAACAATTTTTCGAGCTAAAATTACAAAACAAAAACTATTAATTTGTA
ACAATTTGACTCCATCATCGGCAAAGTTACGCAACGTGGCTCCTATTTTA
AGAGCTTTCAGTTGTGCCATGATTATAAATTACCCCTCATTATGTTCCGG
GAAAAATGTGTCAATTGCATTTTCCATTACCCCTTCGTTTTCGATAGAAA
TCAATTAATTTTGCATAAATAAACTCGATTGGCAGCGTGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

IP11002.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:31:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15256-RB 723 CG15256-RB 35..723 1..689 3445 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 15549824..15550093 420..689 1350 100 Plus
chr2L 23010047 chr2L 15549510..15549768 164..422 1295 100 Plus
chr2L 23010047 chr2L 15549196..15549358 1..163 800 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:04:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15551095..15551364 420..689 1350 100 Plus
2L 23513712 2L 15550781..15551039 164..422 1295 100 Plus
2L 23513712 2L 15550467..15550629 1..163 815 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15551095..15551364 420..689 1350 100 Plus
2L 23513712 2L 15550781..15551039 164..422 1295 100 Plus
2L 23513712 2L 15550467..15550629 1..163 815 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:57:02 has no hits.

IP11002.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:58:13 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 15549196..15549358 1..163 99 -> Plus
chr2L 15549510..15549767 164..421 100 -> Plus
chr2L 15549826..15550093 422..689 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:11:37 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RA 1..422 6..430 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:59:42 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 1..441 6..446 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:41:04 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 1..441 6..446 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:46:06 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 1..441 6..446 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-20 09:52:07 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RA 1..422 6..430 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:59:42 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 17..705 1..689 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:41:04 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 96..784 1..689 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:46:06 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
CG15256-RB 96..784 1..689 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:58:13 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15550467..15550629 1..163 100 -> Plus
2L 15550781..15551038 164..421 100 -> Plus
2L 15551097..15551364 422..689 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:58:13 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15550467..15550629 1..163 100 -> Plus
2L 15550781..15551038 164..421 100 -> Plus
2L 15551097..15551364 422..689 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:58:13 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15550467..15550629 1..163 100 -> Plus
2L 15550781..15551038 164..421 100 -> Plus
2L 15551097..15551364 422..689 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:41:04 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15550467..15550629 1..163 100 -> Plus
arm_2L 15550781..15551038 164..421 100 -> Plus
arm_2L 15551097..15551364 422..689 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:51:25 Download gff for IP11002.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15550781..15551038 164..421 100 -> Plus
2L 15551097..15551364 422..689 100   Plus
2L 15550467..15550629 1..163 100 -> Plus

IP11002.hyp Sequence

Translation from 2 to 445

> IP11002.hyp
KMACKKKTKLWEPMTKDELKSTTQAMLEEGARGLRTISTQQKKLVNFQSF
NMDDPRYGISLIEDNMEPPMLSSYTRQYSQPYPNRCKPFVQKTETPDPIF
NRRPKNDFEFTTGLDFKFLDDHMHNLSESRKKVNFFRQLRNQSFLLY*

IP11002.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15256-PC 146 CG15256-PC 1..146 2..147 780 100 Plus
CG15256-PB 146 CG15256-PB 1..146 2..147 780 100 Plus

IP11002.pep Sequence

Translation from 2 to 445

> IP11002.pep
KMACKKKTKLWEPMTKDELKSTTQAMLEEGARGLRTISTQQKKLVNFQSF
NMDDPRYGISLIEDNMEPPMLSSYTRQYSQPYPNRCKPFVQKTETPDPIF
NRRPKNDFEFTTGLDFKFLDDHMHNLSESRKKVNFFRQLRNQSFLLY*

IP11002.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13865-PA 158 GF13865-PA 1..144 2..143 561 72.2 Plus
Dana\GF15125-PA 150 GF15125-PA 1..150 2..140 154 34.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25164-PA 242 GG25164-PA 1..138 2..139 716 94.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13762-PA 185 GH13762-PA 1..132 2..132 375 57.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15256-PC 146 CG15256-PC 1..146 2..147 780 100 Plus
CG15256-PB 146 CG15256-PB 1..146 2..147 780 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:13:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17903-PA 147 GI17903-PA 1..147 2..147 472 64.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:13:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26431-PA 150 GL26431-PA 2..150 1..147 507 62.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13606-PA 150 GA13606-PA 2..150 1..147 508 62.4 Plus
Dpse\GA26005-PA 144 GA26005-PA 21..144 19..140 179 38.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16098-PA 146 GM16098-PA 1..146 2..147 760 96.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24012-PA 261 GD24012-PA 1..138 2..139 739 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17409-PA 140 GJ17409-PA 1..140 2..140 439 61.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18138-PA 150 GK18138-PA 1..150 2..147 461 60 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21045-PA 234 GE21045-PA 1..138 2..139 730 96.4 Plus