Clone IP11109 Report

Search the DGRC for IP11109

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:111
Well:9
Vector:pOT2
Associated Gene/TranscriptCG15531-RA
Protein status:IP11109.pep: gold
Preliminary Size:1005
Sequenced Size:1190

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15531 2005-01-01 Successful iPCR screen
CG15531 2008-04-29 Release 5.5 accounting
CG15531 2008-08-15 Release 5.9 accounting
CG15531 2008-12-18 5.12 accounting

Clone Sequence Records

IP11109.complete Sequence

1190 bp (1190 high quality bases) assembled on 2005-05-04

GenBank Submission: BT023007

> IP11109.complete
CCACGAAAGGCGGAACCAATTGGGATACAAAATAGGAACCCAAAGGACTT
GGGAAGCCACAATGGAGACAACTAAAGTGAAGGAGCCGGATCAGAGTGGG
GACTCCATCCACAAGAAACGTGATGCCATCTGGCCACTGGTTCTCTTCTA
TATCCACTTAAATATCCTCGGTGTCTATGGGATTTACGTTCTGCTCACTA
GCGCGTCGTGGGCCACGATTTTATTCACCGCCCTGCTCACCCTCCTTGGC
ACTTTGGGCGTGACAGTGGGCGTTCATCGTTTGTGGGCGCACAGGACCTT
CACCGCCTCCAAGCCCCTGAAGGTTTTCCTCATGTTCTGCCAGACGACCG
CCGGTCAGGGCTCCATCTACAGTGTGGTTCAGGCCCATCGCCTCCATCAT
GCCAAGTTCCAGCAGGACGAGGATCCCTACTACAGTAAACACAGCTTCAT
GTACGCCCAGGTGCGCGGCGGTCTTCTGAAGTACTCGCCACAGCAGGAGG
AACTGCTCAAGGATGTGGATATGTCGGACCTGGAAAGTGATCCTGTGGTC
ATGTTTCAGAAGAGATTCTATGTCCTGCTGTACATCTTCCTAAACGTACT
GCTATCGGTGAACACTCCGTTCCAGTACTTTGGGGACTCCCTAGCCACCT
CCATGTTCGTGGGTTTCTGGCTGCGCAGTCTGATCGTTATCAACCTAGGA
AACCTGGTTCACTCATCCCACTTTATTTGGAGCATTCACAAGGGCTTTAA
GCCCACCGATTCCAACAGTATCTTCCTGATCACAAAGAGTTACTGGCCGC
AGTACCACTATCTGCTGCCCAGGGACTACCAGAGTGGGGAGTACGGCAAC
TATGCCTCTGGCATTGGGTCTTCCATGATCCGCGTGTTCGCCGCCCTCGA
CTGGGCCAAGGATCTGAAGACCATTGGATCCGTGGCCGTTCGCCAGGGAC
TGACCAAGGCGGTGGAGACTGGTCGTCCGATCGTCGAGTGCATCGAGGAA
CAAGTGGAGCTGGAGGAAAACGCCCTGCCCGCCAACCATTTCCTCAACCG
GGAGAAGTTTATGTGAGCATATTGCATCATCGGCCCACTAAAACGGTCCG
ACAAATGGACGCGGCAGTCGTAAAAATAAATTAACCGCCTCGGAAAGGGC
GGGTAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP11109.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:24:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15531-RA 1420 CG15531-RA 27..1188 1..1162 5795 99.9 Plus
CG15531.a 1393 CG15531.a 1..1161 2..1162 5790 99.9 Plus
CG15531-RB 1083 CG15531-RB 1..1061 2..1062 5305 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26017250..26017846 1159..563 2835 98.3 Minus
chr3R 27901430 chr3R 26018463..26018689 227..1 1105 99.1 Minus
chr3R 27901430 chr3R 26017907..26018116 564..355 1035 99.5 Minus
chr3R 27901430 chr3R 26018239..26018370 359..228 645 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:04:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30194787..30195386 1162..563 2985 99.8 Minus
3R 32079331 3R 30196003..30196229 227..1 1135 100 Minus
3R 32079331 3R 30195447..30195656 564..355 1050 100 Minus
3R 32079331 3R 30195779..30195910 359..228 660 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29935618..29936217 1162..563 2985 99.8 Minus
3R 31820162 3R 29936834..29937060 227..1 1135 100 Minus
3R 31820162 3R 29936278..29936487 564..355 1050 100 Minus
3R 31820162 3R 29936610..29936741 359..228 660 100 Minus
Blast to na_te.dros performed 2019-03-15 23:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1997..2062 632..567 114 63.6 Minus

IP11109.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:49:42 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26018463..26018689 1..227 99   Minus
chr3R 26017250..26017844 565..1159 98 <- Minus
chr3R 26017907..26018112 359..564 99 <- Minus
chr3R 26018240..26018370 228..358 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:48:09 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1005 62..1066 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:42:53 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1005 62..1066 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:45:19 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1005 62..1066 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:23:01 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1005 62..1066 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:48:24 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1005 62..1066 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:15:48 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1158 2..1159 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:42:52 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1158 2..1159 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:45:19 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1158 2..1159 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:02 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1158 2..1159 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:48:24 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
CG15531-RA 1..1158 2..1159 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:49:42 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30194790..30195384 565..1159 99 <- Minus
3R 30195447..30195652 359..564 100 <- Minus
3R 30195780..30195910 228..358 100 <- Minus
3R 30196003..30196229 1..227 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:49:42 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30194790..30195384 565..1159 99 <- Minus
3R 30195447..30195652 359..564 100 <- Minus
3R 30195780..30195910 228..358 100 <- Minus
3R 30196003..30196229 1..227 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:49:42 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30194790..30195384 565..1159 99 <- Minus
3R 30195447..30195652 359..564 100 <- Minus
3R 30195780..30195910 228..358 100 <- Minus
3R 30196003..30196229 1..227 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:45:19 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26020512..26021106 565..1159 99 <- Minus
arm_3R 26021169..26021374 359..564 100 <- Minus
arm_3R 26021502..26021632 228..358 100 <- Minus
arm_3R 26021725..26021951 1..227 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:04:33 Download gff for IP11109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29936278..29936483 359..564 100 <- Minus
3R 29936611..29936741 228..358 100 <- Minus
3R 29935621..29936215 565..1159 99 <- Minus
3R 29936834..29937060 1..227 100   Minus

IP11109.hyp Sequence

Translation from 0 to 1065

> IP11109.hyp
HERRNQLGYKIGTQRTWEATMETTKVKEPDQSGDSIHKKRDAIWPLVLFY
IHLNILGVYGIYVLLTSASWATILFTALLTLLGTLGVTVGVHRLWAHRTF
TASKPLKVFLMFCQTTAGQGSIYSVVQAHRLHHAKFQQDEDPYYSKHSFM
YAQVRGGLLKYSPQQEELLKDVDMSDLESDPVVMFQKRFYVLLYIFLNVL
LSVNTPFQYFGDSLATSMFVGFWLRSLIVINLGNLVHSSHFIWSIHKGFK
PTDSNSIFLITKSYWPQYHYLLPRDYQSGEYGNYASGIGSSMIRVFAALD
WAKDLKTIGSVAVRQGLTKAVETGRPIVECIEEQVELEENALPANHFLNR
EKFM*

IP11109.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15531-PA 334 CG15531-PA 1..334 21..354 1751 100 Plus
Fad2-PA 355 CG7923-PA 38..330 39..327 478 34.5 Plus
Desat1-PD 383 CG5887-PD 42..347 17..315 457 30.7 Plus
Desat1-PB 383 CG5887-PB 42..347 17..315 457 30.7 Plus
Desat1-PE 383 CG5887-PE 42..347 17..315 457 30.7 Plus

IP11109.pep Sequence

Translation from 1 to 1065

> IP11109.pep
HERRNQLGYKIGTQRTWEATMETTKVKEPDQSGDSIHKKRDAIWPLVLFY
IHLNILGVYGIYVLLTSASWATILFTALLTLLGTLGVTVGVHRLWAHRTF
TASKPLKVFLMFCQTTAGQGSIYSVVQAHRLHHAKFQQDEDPYYSKHSFM
YAQVRGGLLKYSPQQEELLKDVDMSDLESDPVVMFQKRFYVLLYIFLNVL
LSVNTPFQYFGDSLATSMFVGFWLRSLIVINLGNLVHSSHFIWSIHKGFK
PTDSNSIFLITKSYWPQYHYLLPRDYQSGEYGNYASGIGSSMIRVFAALD
WAKDLKTIGSVAVRQGLTKAVETGRPIVECIEEQVELEENALPANHFLNR
EKFM*

IP11109.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16193-PA 334 GF16193-PA 1..334 21..354 1627 88.9 Plus
Dana\GF18504-PA 352 GF18504-PA 44..332 43..327 463 33.7 Plus
Dana\GF24026-PA 355 GF24026-PA 38..330 39..327 463 34.9 Plus
Dana\GF16174-PA 355 GF16174-PA 19..342 20..339 460 31 Plus
Dana\GF17961-PA 383 GF17961-PA 71..351 43..319 457 32.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11953-PA 334 GG11953-PA 1..334 21..354 1735 96.7 Plus
Dere\GG15465-PA 354 GG15465-PA 38..330 39..327 458 34 Plus
Dere\GG18949-PA 383 GG18949-PA 43..351 18..319 457 31.8 Plus
Dere\GG11952-PA 419 GG11952-PA 102..386 44..325 414 32.4 Plus
Dere\GG19533-PA 407 GG19533-PA 60..336 41..313 397 31.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18423-PA 339 GH18423-PA 23..339 38..354 1330 75.7 Plus
Dgri\GH21229-PA 384 GH21229-PA 49..352 20..319 450 31.7 Plus
Dgri\GH21218-PA 382 GH21218-PA 52..338 20..308 440 33.1 Plus
Dgri\GH18426-PA 414 GH18426-PA 54..374 31..348 437 31.5 Plus
Dgri\GH18422-PA 422 GH18422-PA 105..389 44..325 402 32.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15531-PA 334 CG15531-PA 1..334 21..354 1751 100 Plus
Fad2-PA 355 CG7923-PA 38..330 39..327 478 34.5 Plus
Desat1-PD 383 CG5887-PD 42..347 17..315 457 30.7 Plus
Desat1-PB 383 CG5887-PB 42..347 17..315 457 30.7 Plus
Desat1-PE 383 CG5887-PE 42..347 17..315 457 30.7 Plus
Desat1-PC 383 CG5887-PC 42..347 17..315 457 30.7 Plus
Desat1-PA 383 CG5887-PA 42..347 17..315 457 30.7 Plus
Desat2-PA 361 CG5925-PA 50..326 43..315 447 33.6 Plus
CG9743-PA 420 CG9743-PA 61..370 5..308 416 31.5 Plus
CG8630-PA 408 CG8630-PA 61..337 41..313 400 32.3 Plus
CG9747-PB 461 CG9747-PB 152..389 86..319 326 30.4 Plus
CG9747-PA 461 CG9747-PA 152..389 86..319 326 30.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24324-PA 335 GI24324-PA 6..335 25..354 1339 73.6 Plus
Dmoj\GI10485-PA 384 GI10485-PA 49..352 20..319 451 31.4 Plus
Dmoj\GI10484-PA 367 GI10484-PA 50..335 38..319 432 32.5 Plus
Dmoj\GI24323-PA 418 GI24323-PA 68..385 9..325 422 31.1 Plus
Dmoj\GI24327-PA 424 GI24327-PA 74..352 39..313 419 33.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:34:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14060-PA 337 GL14060-PA 9..337 26..354 1568 86.6 Plus
Dper\GL22317-PA 361 GL22317-PA 43..336 38..327 471 33.2 Plus
Dper\GL23117-PA 362 GL23117-PA 44..337 38..327 466 33.6 Plus
Dper\GL15669-PA 353 GL15669-PA 27..326 25..327 454 32.5 Plus
Dper\GL27314-PA 380 GL27314-PA 68..348 43..319 444 32 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26941-PA 337 GA26941-PA 8..337 25..354 1567 86.1 Plus
Dpse\DesatF-beta-PA 362 GA27148-PA 44..337 38..327 478 34.6 Plus
Dpse\DesatF-gamma-PA 361 GA27452-PA 43..336 38..327 463 32.9 Plus
Dpse\DesatF-alpha-PA 353 GA20691-PA 27..326 25..327 454 32.5 Plus
Dpse\Desat2-PA 380 GA19234-PA 68..348 43..319 444 32 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12171-PA 334 GM12171-PA 1..334 21..354 1787 99.7 Plus
Dsec\GM25238-PA 354 GM25238-PA 16..329 18..327 481 33 Plus
Dsec\GM24035-PA 361 GM24035-PA 48..332 45..324 439 34 Plus
Dsec\GM12168-PA 420 GM12168-PA 103..387 44..325 408 32.1 Plus
Dsec\GM24094-PA 408 GM24094-PA 61..337 41..313 401 32.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17223-PA 334 GD17223-PA 1..334 21..354 1776 99.1 Plus
Dsim\GD14271-PA 355 GD14271-PA 37..330 38..327 470 34.2 Plus
Dsim\Fad-PA 383 GD18837-PA 43..351 18..319 452 31.2 Plus
Dsim\desat2-PA 361 GD18836-PA 50..332 43..324 450 33.2 Plus
Dsim\GD17212-PA 420 GD17212-PA 103..387 44..325 407 32.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10409-PA 340 GJ10409-PA 5..340 19..354 1392 75.9 Plus
Dvir\GJ23166-PA 384 GJ23166-PA 49..352 20..319 443 30.7 Plus
Dvir\GJ10413-PA 420 GJ10413-PA 77..353 47..319 418 33 Plus
Dvir\GJ23165-PA 381 GJ23165-PA 69..349 43..319 410 31.7 Plus
Dvir\GJ10408-PA 422 GJ10408-PA 105..389 44..325 401 32.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13142-PA 339 GK13142-PA 9..339 24..354 1424 76.7 Plus
Dwil\GK14407-PA 383 GK14407-PA 43..351 18..319 442 32.2 Plus
Dwil\GK14406-PA 374 GK14406-PA 57..362 38..339 434 30.9 Plus
Dwil\GK13932-PA 415 GK13932-PA 68..375 41..348 418 31.9 Plus
Dwil\GK17186-PA 363 GK17186-PA 46..333 38..324 411 32.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23402-PA 334 GE23402-PA 1..334 21..354 1756 98.5 Plus
Dyak\desat1-PA 383 GE26198-PA 43..351 18..319 458 31.8 Plus
Dyak\GE26197-PA 358 GE26197-PA 41..329 37..324 455 33.6 Plus
Dyak\GE21776-PA 340 GE21776-PA 37..316 38..327 432 32.9 Plus
Dyak\GE23401-PA 422 GE23401-PA 105..389 44..325 412 32.1 Plus