Clone IP11112 Report

Search the DGRC for IP11112

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:111
Well:12
Vector:pOT2
Associated Gene/TranscriptCG15546-RA
Protein status:IP11112.pep: gold
Preliminary Size:1233
Sequenced Size:1835

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15546 2005-01-01 Successful iPCR screen
CG15546 2008-04-29 Release 5.5 accounting
CG15546 2008-08-15 Release 5.9 accounting
CG15546 2008-12-18 5.12 accounting

Clone Sequence Records

IP11112.complete Sequence

1835 bp (1835 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023003

> IP11112.complete
CTCCGATCAGTCGAGTGGACCACCAATCCGGCGAAGATTGGGCGACCATG
CTGAACGGAAAATTCTACACGGGCTTGCCGCCCAAAATGGTGGAGCGCCA
GGCGGTGAAGGTGTGCAATCGCCAGGAGTCGCACTTCTTCTGGCCAGACG
ATTCCCGAGCGGATTCCGCGGTGGAAACCCGAGCAAAGAGGAGAAACAGC
CAGCAGCTGGAGAGGCCTGTGGAAAGGATTACTTCCAATCAGAATGTATC
CGACGAAGTGGACACACGGCGAATGTTTCACAAGGAGTTTGCCAGTTCTT
CCATACAGTTCTATGATAATCTGCAGTCTAATCCTGGAAATAAACCTTCA
TTGGCAAGGGGTCTACGCAGAGAAATAACCCCAAAACTAACCGAAGTGAG
ACCGCAGGAATCGGATAACAAAGCTGAGGACACCAGCAGCCGTCGCCAGC
AGGCTTACAGCTCCAAGATCCAGTTCTACGATTATGTAAACGAAGCAGAT
AACCTAACTCAAAATAACGCCAGGAGACCACAAATGGACTTGAATGACAA
GCGCGAAGTGGAACTGAATTCCAAGAACAGTCCCAAGCTGCAGGTCAAAA
GAAATGTGCGCAGTTTCAGCGTGGAACTGGAGCCCAAGGTCACCAAGAAA
CCCCTGAACGACAGTCCCGAGTGGCGGCGGCCACGCCCACTGCCCCTGCC
CAAAAGGATACTGAAGCAAACGTCACAGGATCAGGACCCGTACGACCATC
TGGAAAGTCGAGTCCGAAGATTGCAACTAACCCGAAGTCCCGGACTGCCC
AAAAAGCATGTGACCTACAACGAGGAGGCTGCCGAGTACGCCTACTACGA
TGATCGGGTGGATCGCGATGATCGGGAGGATCGCGAGGATCGTGAGGAGC
CCACCTACGAAACTCGCTACCGTCAGCAGCCAAATATGCCGACAGGAAGT
CGCCAGCAGCAGCAGCAGCAGCAACATCAACGCTCTTTTATGGAAACTAG
TCGGAGCAAGCCATTAAATAATAATAATAATTATCAGGCCAACGGCAATG
GTAGGAAAATCTTTCCAAAAATGCCACAGACCCAATCCGGAGTGGGTAAC
ACACACACTATCGACGAAGATCCCCCCGTGCCCTCTGACCCTCGCAAACA
CCTGCGCAGCAGCCTCTGCTTCAGCGGCGACGCTTTGATGGTGGGCGGTA
CGGCGTCGCAGTCGCCGCCCACTGCGCAGGCGCGTCGCAGCTCAGCGGGG
CAGAGAGTGAGCGTGGGTCTGCCGGACTGAGGGCTCCAGTTCGCGTGTTC
AGTGATTAGTGCAGCTACACAGTGAGAAATGCAAGTGCAAAAACATATAA
CTGAAGCGATGAAGAAGATCATACAAGAATATCTGCTTGACAATCATTAG
GATGAAATAGTATTACAAATATTTCTCTATGTAGTAAGTCGACAGCAACA
ATCTGCATTGCTAATTGAAAGCCAACAGCGACTGCAACAGAAGCAGCAAC
AACATCTGCAGCACAACAGCCACATCAGCAGCAAGTTGATGCGACAGCAG
CAGCTCAACCTTTTTTTAGTTTTTACTTTTACGATCCCATACAAACTCTG
AATTCACCCACATGCGAATGAATGAGTCGGCTTTTTTGTTGTTTTCGAGC
GGTTGAATATACATACATAAACAAACCTTGATCTTGACTAATTTGTCGGC
GATGCTGTTGTTGTGCACCACGATCATGTATTAATTTAGCTTTTAAAGCC
AACGCAGAAAAATCTATAATTATAATGATAGAGATATGCTAATAAACTAA
TACATATATAACCAAATAAAAAAAAAAAAAAAAAA

IP11112.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG15546-RA 1813 CG15546-RA 1..1813 1..1813 9065 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26696823..26698639 1817..1 8765 99.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:04:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30874362..30876181 1820..1 9100 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 30615193..30617012 1820..1 9100 100 Minus
Blast to na_te.dros performed 2019-03-15 18:01:39
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1040..1133 1461..1554 208 71.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6806 1473..1554 202 74.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2379..2460 1473..1554 193 73.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6851 1473..1554 192 72.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6828 1473..1552 191 73.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2298..2391 1457..1554 182 70.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2790..2877 1473..1557 180 71.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6785..6896 1440..1554 179 67.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2418 1473..1554 177 72 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2415..2532 1443..1560 174 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6785 1492..1554 170 78.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2367..2448 1473..1554 166 69.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1582 1473..1533 163 75.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2478 1440..1554 160 64.4 Plus
roo 9092 roo DM_ROO 9092bp 1079..1135 1473..1534 154 77.4 Plus
roo 9092 roo DM_ROO 9092bp 1095..1175 1444..1527 133 65.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1513..1589 1436..1522 130 71.3 Plus
roo 9092 roo DM_ROO 9092bp 1100..1158 1473..1533 129 72.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2852..2964 1460..1560 124 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2617..2665 1471..1518 116 73.5 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 974..1033 1472..1532 113 71.4 Plus

IP11112.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:02:32 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26696823..26697079 1561..1817 98 == Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:48:10 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:51 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:52:46 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:32 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:52:43 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:04:11 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:51 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 6..1822 1..1817 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:52:46 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 6..1822 1..1817 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:32 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 1..1233 48..1280 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:52:43 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
CG15546-RA 6..1822 1..1817 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:32 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30874365..30876181 1..1817 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:32 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30874365..30876181 1..1817 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:32 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30874365..30876181 1..1817 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:52:46 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26700087..26701903 1..1817 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:45 Download gff for IP11112.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30615196..30617012 1..1817 100   Minus

IP11112.hyp Sequence

Translation from 2 to 1279

> IP11112.hyp
PISRVDHQSGEDWATMLNGKFYTGLPPKMVERQAVKVCNRQESHFFWPDD
SRADSAVETRAKRRNSQQLERPVERITSNQNVSDEVDTRRMFHKEFASSS
IQFYDNLQSNPGNKPSLARGLRREITPKLTEVRPQESDNKAEDTSSRRQQ
AYSSKIQFYDYVNEADNLTQNNARRPQMDLNDKREVELNSKNSPKLQVKR
NVRSFSVELEPKVTKKPLNDSPEWRRPRPLPLPKRILKQTSQDQDPYDHL
ESRVRRLQLTRSPGLPKKHVTYNEEAAEYAYYDDRVDRDDREDREDREEP
TYETRYRQQPNMPTGSRQQQQQQQHQRSFMETSRSKPLNNNNNYQANGNG
RKIFPKMPQTQSGVGNTHTIDEDPPVPSDPRKHLRSSLCFSGDALMVGGT
ASQSPPTAQARRSSAGQRVSVGLPD*

IP11112.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15546-PA 410 CG15546-PA 1..410 16..425 2154 100 Plus

IP11112.pep Sequence

Translation from 47 to 1279

> IP11112.pep
MLNGKFYTGLPPKMVERQAVKVCNRQESHFFWPDDSRADSAVETRAKRRN
SQQLERPVERITSNQNVSDEVDTRRMFHKEFASSSIQFYDNLQSNPGNKP
SLARGLRREITPKLTEVRPQESDNKAEDTSSRRQQAYSSKIQFYDYVNEA
DNLTQNNARRPQMDLNDKREVELNSKNSPKLQVKRNVRSFSVELEPKVTK
KPLNDSPEWRRPRPLPLPKRILKQTSQDQDPYDHLESRVRRLQLTRSPGL
PKKHVTYNEEAAEYAYYDDRVDRDDREDREDREEPTYETRYRQQPNMPTG
SRQQQQQQQHQRSFMETSRSKPLNNNNNYQANGNGRKIFPKMPQTQSGVG
NTHTIDEDPPVPSDPRKHLRSSLCFSGDALMVGGTASQSPPTAQARRSSA
GQRVSVGLPD*

IP11112.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23309-PA 421 GF23309-PA 1..421 1..410 1392 70.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11907-PA 420 GG11907-PA 1..420 1..410 1735 87.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:50:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14095-PA 474 GH14095-PA 1..474 1..410 798 49.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG15546-PA 410 CG15546-PA 1..410 1..410 2154 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10629-PA 492 GI10629-PA 1..492 1..410 832 47 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13985-PA 417 GL13985-PA 1..417 1..410 1042 60.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:50:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26920-PA 433 GA26920-PA 1..433 1..410 1109 62.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12126-PA 312 GM12126-PA 1..310 1..315 1561 95.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:50:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16807-PA 401 GD16807-PA 1..401 1..410 1963 93.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22981-PA 486 GJ22981-PA 1..486 1..410 885 49.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13106-PA 454 GK13106-PA 1..454 1..410 1015 53.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23356-PA 416 GE23356-PA 1..416 1..410 1765 86.4 Plus