Clone IP11170 Report

Search the DGRC for IP11170

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:111
Well:70
Vector:pOT2
Associated Gene/TranscriptCG31157-RD
Protein status:IP11170.pep: gold
Preliminary Size:1076
Sequenced Size:1321

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31157 2005-01-01 Successful iPCR screen
CG31157 2008-04-29 Release 5.5 accounting
CG31157 2008-08-15 Release 5.9 accounting
CG31157 2008-12-18 5.12 accounting

Clone Sequence Records

IP11170.complete Sequence

1321 bp (1321 high quality bases) assembled on 2006-01-20

GenBank Submission: BT024320

> IP11170.complete
CGAATATCGTCGCGTTATGGTCGCACCGAGCAAACTCCTGGAGCCGCCCC
TGAATCGGGTGCACTGCGCCATACTGCACAGCCTGCCGGGCCAGAGTTGC
ACGAAGGCCTTCCTGTGGAATCTCTACCGCAACCATGTGTCCAGTGCCAA
GTACTATTCACCTTTGTTGCTGGTCTGTTACCTTTGATAATGAACTGGCG
AAAGTTGTCCAAAAGCATGGTGCTTTCTGTGGCCAAGAACTATGCTCAAT
CCGCCAGTTTTGCTGCCTGGATAAATGCCATTACCTTTTACTTGATGTGC
ATGGGAAGGCGTCTCAACGATCGATTTGTATTCATATTTATACCATTTCT
GCCCTGCTGGATTGCCTCGCAGTTGAGTTGGTTGATGCCTCCTCAGGTGC
TTCACTTCTTCGTGACGGGCATAACACCAGCGGCAATGGAAAGCCTAATG
AGATATTTCAACATCGGTTTGGTACATTCACCCATGGCCCAGACTCTTCT
GTTCATGATATCCTCGGTGATAGTCTTGCATTACCAGCAGACTCGAAAGT
ACTCCGGTTTCTGGTTCATTCGACCAGCTTCTCTGCCCGAGGATACCGAA
GATTGGACGATTTTGAAGCAAGTGCAGCAGGGTATCAGGGAGTTGAGATC
ATACTTGGGCATTGGACTGGCAATGGATCTGCTCAATCCCTTGATGAAGC
GAAACATGAAACTCTGGCGACCCAAGATGACAAGTTTCTTGGCGGGCTAC
ATAGGATTGTTTAAGGTGGTTCAATTACTTTTATTGAAAAGATTGAATGT
AAATCAAGCCAATGCTCTGGCTTCCTTTATAAGCGGTTCGTCGTTTGCTC
TTCTATCAAATCGTCTCACATTCATGTGTTTTGCAATTGTAACTGCCATC
CAGGTGATTTGGAGCCAGGTGTGCAATACTAAAGATGAAAAGGATTCGGT
TCTATCTGCAGTGCGAAAGATTCCCTGGGCTAGACTGCTGATACCCTGTA
GTCTGGCATACCTGGTGCACATTTTCTTCTACCACCAAAGGCATCTCAAT
GAGATGGCCCGGAGTTTCATAGACTGCACGTGTGATAACAATGGCCAACG
ATTGTTGAATCTGATAGGTCTTCCCAGTGTCAATGCGATACTACAAGCTG
TGGATAGGACACCTAAAACTTCCTTTTTGTTTTAATTATATTGATATATA
AAAATCATAAACATTTTCAGAATGAAATTATATGTGACCGTTAATCATGA
AATCATTTGCCAACCATATAACGTTTTAAACAATGCGCATAAATTATTTT
TAGCCAAAAAAAAAAAAAAAA

IP11170.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG31157-RB 1339 CG31157-RB 16..1322 1..1307 6535 100 Plus
CG31157.b 1325 CG31157.b 16..1325 1..1307 6480 99.7 Plus
CG31157.a 1407 CG31157.a 89..1390 1..1307 6435 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8873531..8873866 432..767 1665 99.7 Plus
chr3R 27901430 chr3R 8873916..8874247 760..1091 1600 98.8 Plus
chr3R 27901430 chr3R 8873223..8873479 177..433 1270 99.6 Plus
chr3R 27901430 chr3R 8874298..8874511 1092..1305 1040 99.1 Plus
chr3R 27901430 chr3R 8872969..8873145 1..177 885 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:04:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13048312..13048647 432..767 1680 100 Plus
3R 32079331 3R 13048699..13049030 760..1091 1645 99.7 Plus
3R 32079331 3R 13048004..13048260 177..433 1285 100 Plus
3R 32079331 3R 13049081..13049296 1092..1307 1080 100 Plus
3R 32079331 3R 13047750..13047926 1..177 885 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12789143..12789478 432..767 1680 100 Plus
3R 31820162 3R 12789530..12789861 760..1091 1645 99.6 Plus
3R 31820162 3R 12788835..12789091 177..433 1285 100 Plus
3R 31820162 3R 12789912..12790127 1092..1307 1080 100 Plus
3R 31820162 3R 12788581..12788757 1..177 885 100 Plus
Blast to na_te.dros performed 2019-03-16 23:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 10045..10094 662..710 112 74.5 Plus

IP11170.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:26:41 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8872969..8873145 1..177 100 -> Plus
chr3R 8873224..8873478 178..432 99 -> Plus
chr3R 8873532..8873864 433..765 99 -> Plus
chr3R 8873922..8874247 766..1091 99 -> Plus
chr3R 8874298..8874511 1092..1305 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:48:25 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RB 16..1200 1..1185 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:37:40 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RB 16..1200 1..1185 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:42:30 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RC 1..1164 17..1185 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:12:35 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RB 16..1200 1..1185 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:49:13 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RC 1..1164 17..1185 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:09:28 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RB 16..1320 1..1305 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:37:40 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RB 16..1320 1..1305 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:30 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RD 20..1324 1..1305 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:12:36 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RB 16..1320 1..1305 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:49:13 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
CG31157-RD 20..1324 1..1305 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:26:41 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13049081..13049294 1092..1305 100   Plus
3R 13047750..13047926 1..177 100 -> Plus
3R 13048005..13048259 178..432 100 -> Plus
3R 13048705..13049030 766..1091 100 -> Plus
3R 13048313..13048645 433..765 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:26:41 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13049081..13049294 1092..1305 100   Plus
3R 13047750..13047926 1..177 100 -> Plus
3R 13048005..13048259 178..432 100 -> Plus
3R 13048705..13049030 766..1091 100 -> Plus
3R 13048313..13048645 433..765 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:26:41 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13049081..13049294 1092..1305 100   Plus
3R 13047750..13047926 1..177 100 -> Plus
3R 13048005..13048259 178..432 100 -> Plus
3R 13048705..13049030 766..1091 100 -> Plus
3R 13048313..13048645 433..765 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:30 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8874803..8875016 1092..1305 100   Plus
arm_3R 8873472..8873648 1..177 100 -> Plus
arm_3R 8873727..8873981 178..432 100 -> Plus
arm_3R 8874035..8874367 433..765 100 -> Plus
arm_3R 8874427..8874752 766..1091 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:48 Download gff for IP11170.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12789536..12789861 766..1091 100 -> Plus
3R 12789912..12790125 1092..1305 100   Plus
3R 12788836..12789090 178..432 100 -> Plus
3R 12789144..12789476 433..765 100 -> Plus
3R 12788581..12788757 1..177 100 -> Plus

IP11170.pep Sequence

Translation from 0 to 1184

> IP11170.pep
RISSRYGRTEQTPGAAPESGALRHTAQPAGPELHEGLPVESLPQPCVQCQ
VLFTFVAGLLPLIMNWRKLSKSMVLSVAKNYAQSASFAAWINAITFYLMC
MGRRLNDRFVFIFIPFLPCWIASQLSWLMPPQVLHFFVTGITPAAMESLM
RYFNIGLVHSPMAQTLLFMISSVIVLHYQQTRKYSGFWFIRPASLPEDTE
DWTILKQVQQGIRELRSYLGIGLAMDLLNPLMKRNMKLWRPKMTSFLAGY
IGLFKVVQLLLLKRLNVNQANALASFISGSSFALLSNRLTFMCFAIVTAI
QVIWSQVCNTKDEKDSVLSAVRKIPWARLLIPCSLAYLVHIFFYHQRHLN
EMARSFIDCTCDNNGQRLLNLIGLPSVNAILQAVDRTPKTSFLF*

IP11170.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17573-PA 301 GF17573-PA 90..281 65..255 626 57.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19423-PA 265 GG19423-PA 57..248 64..255 919 87.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18373-PA 255 GH18373-PA 59..250 65..256 499 46.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG31157-PC 387 CG31157-PC 52..387 59..394 1744 100 Plus
CG31157-PD 331 CG31157-PD 1..331 64..394 1721 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23364-PA 362 GI23364-PA 54..360 59..364 779 48.2 Plus
Dmoj\GI23363-PA 356 GI23363-PA 86..356 89..363 230 25.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24387-PA 265 GL24387-PA 59..255 60..256 646 58.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16053-PC 408 GA16053-PC 15..408 3..394 1163 59 Plus
Dpse\GA30022-PA 392 GA30022-PA 98..392 99..363 205 27.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24083-PA 269 GM24083-PA 56..248 63..255 973 92.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18879-PA 269 GD18879-PA 56..248 63..255 990 94.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10357-PA 359 GJ10357-PA 10..359 28..364 823 44 Plus
Dvir\GJ10356-PA 375 GJ10356-PA 60..368 67..371 202 28.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12232-PA 281 GK12232-PA 54..252 59..256 585 52.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26243-PA 285 GE26243-PA 73..264 64..255 912 85.4 Plus

IP11170.hyp Sequence

Translation from 0 to 1184

> IP11170.hyp
RISSRYGRTEQTPGAAPESGALRHTAQPAGPELHEGLPVESLPQPCVQCQ
VLFTFVAGLLPLIMNWRKLSKSMVLSVAKNYAQSASFAAWINAITFYLMC
MGRRLNDRFVFIFIPFLPCWIASQLSWLMPPQVLHFFVTGITPAAMESLM
RYFNIGLVHSPMAQTLLFMISSVIVLHYQQTRKYSGFWFIRPASLPEDTE
DWTILKQVQQGIRELRSYLGIGLAMDLLNPLMKRNMKLWRPKMTSFLAGY
IGLFKVVQLLLLKRLNVNQANALASFISGSSFALLSNRLTFMCFAIVTAI
QVIWSQVCNTKDEKDSVLSAVRKIPWARLLIPCSLAYLVHIFFYHQRHLN
EMARSFIDCTCDNNGQRLLNLIGLPSVNAILQAVDRTPKTSFLF*

IP11170.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31157-PC 387 CG31157-PC 52..387 59..394 1744 100 Plus
CG31157-PD 331 CG31157-PD 1..331 64..394 1721 100 Plus