Clone IP11188 Report

Search the DGRC for IP11188

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:111
Well:88
Vector:pOT2
Associated Gene/TranscriptCG31835-RA
Protein status:IP11188.pep: gold
Preliminary Size:1050
Sequenced Size:1250

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31835 2005-01-01 Successful iPCR screen
CG31835 2008-04-29 Release 5.5 accounting
CG31835 2008-08-15 Release 5.9 accounting
CG31835 2008-12-18 5.12 accounting

Clone Sequence Records

IP11188.complete Sequence

1250 bp (1250 high quality bases) assembled on 2006-01-20

GenBank Submission: BT024317

> IP11188.complete
ATGTCATTGTATAGATTCGATTTGTTAAAATTTAGAACCCTTTTGCCCGT
TTTTTCGACCAGAGTTTAGGTATATTCGCTAAGAACGAAGTTAGCACAAG
GATCGAGGATGGGTCACCGCAACATTTGCTGCAACGGCTGTCAAATGACG
ATCTTCCAGGGTAGCCGCTTCCGGTGTTTGCGCTGCGTGAACTATAACCT
ATGTGACATATGCTACGATCATCAGATAGAAACGGAAGAGCATCGCGCCA
ATCATCCCATGCAATTGTTCCCTGACTCGGACGATCTGGTTCCGCTGCTT
TACGGCGAAATCCCAGAGCTGGTCCACCTGTCCAATTGCTTCACCTGTCC
ACATTGCGGCCTACTTGCGCTCACAGCGAAGCGGTTCATCGAACATGTTT
ACGTTCAACATCGGGTGTCCAATGAATATGTGGTCTGCCCCATGTGCGCC
GGACTGTCGGCCGCCGAACTGGTGGCCATACGCCACCTTTCCAAACATCT
CCTGCACAACCACATCGATCACGCCAATTACCTAGAGCCCGACACACCGC
CACTACGCCGAATATTTACCCGTAATCACATGCGCCACCACCGCCAATCG
CAGTTGCAAACAACTCCGAATTCAAGGATATTCGATATATCCGTATGGCT
GTCAACTGGACGTGTGAGCTCCGATCCCCAGCTCCTAAGCAACAATGATC
CTCCAGAGGAGGCAGCCAATTCAGAGTCCCTGGCGTTAGGCTTGAGTTCC
GGGGGGCCATTCGAACACGACGACGACAGATATGTTCTACTTCAGTGGAT
TGCACAGCAAAAAGTGCAGTGCCACGATACGGACGAATCTCAAAGGCTGC
GGCGAACCCTCTTCGTTGAGCACTTGCTGATTTCCATGCTGTGCTGCGAG
GAGTTGCAGTTGCCGGATGGAGACAGACGAATACGGGAAGGAAATGGGGA
GAGTGATCTAGACCAGGAAAACCATAGCAGTCTGGTCAAGGTCATGTCAG
TGATGTCACTGCCGTGGACAGGAGTTTGGCAGACCAACCAGCTAGACGGA
TCGGAGGGGGAAGGCGAGATACGGGCAGCCAAAAAAGATGGAGTCGATCT
GGACAAGGTGCAGATCGAGGAGCACAAAAGGGTGGCTGCTGAGGAGGCCA
TTGATTAGGATACTCGAAATTGTATCTGTTTTTTCAATCATGTTGAATCC
GCTTTTTAGTTGCGTTACATATTTCAAAAAAAAAAAAAAAAAAAAAAAAA

IP11188.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:49:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42585-RA 1225 CG42585-RA 1..1225 1..1225 6125 100 Plus
CG31835-RA 1225 CG31835-RA 1..1225 1..1225 6125 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 14734535..14735759 1..1225 6125 100 Plus
chr2L 23010047 chr2L 14738606..14739830 1..1225 6125 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:05:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14735843..14737081 1..1239 6165 99.8 Plus
2L 23513712 2L 14739914..14741152 1..1239 6165 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14739914..14741152 1..1239 6165 99.8 Plus
2L 23513712 2L 14735843..14737081 1..1239 6165 99.8 Plus
Blast to na_te.dros performed on 2019-03-16 06:57:28 has no hits.

IP11188.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:58:25 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 14734535..14735759 1..1225 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:48:30 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG31835-RA 1..1050 109..1158 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:44:57 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG42585-RA 1..1050 109..1158 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:28:53 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG42585-RA 1..1050 109..1158 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:25:50 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG31835-RA 1..1050 109..1158 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:26:17 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG31835-RA 1..1050 109..1158 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:53:17 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG31835-RA 1..1225 1..1225 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:44:57 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG42585-RA 1..1225 1..1225 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:53 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG42585-RA 1..1225 1..1225 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:25:50 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG31835-RA 1..1050 109..1158 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:26:17 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
CG31835-RA 1..1225 1..1225 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:58:25 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14735843..14737067 1..1225 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:58:25 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14735843..14737067 1..1225 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:58:25 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14735843..14737067 1..1225 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:53 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14735843..14737067 1..1225 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:58:49 Download gff for IP11188.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14735843..14737067 1..1225 100   Plus

IP11188.pep Sequence

Translation from 108 to 1157

> IP11188.pep
MGHRNICCNGCQMTIFQGSRFRCLRCVNYNLCDICYDHQIETEEHRANHP
MQLFPDSDDLVPLLYGEIPELVHLSNCFTCPHCGLLALTAKRFIEHVYVQ
HRVSNEYVVCPMCAGLSAAELVAIRHLSKHLLHNHIDHANYLEPDTPPLR
RIFTRNHMRHHRQSQLQTTPNSRIFDISVWLSTGRVSSDPQLLSNNDPPE
EAANSESLALGLSSGGPFEHDDDRYVLLQWIAQQKVQCHDTDESQRLRRT
LFVEHLLISMLCCEELQLPDGDRRIREGNGESDLDQENHSSLVKVMSVMS
LPWTGVWQTNQLDGSEGEGEIRAAKKDGVDLDKVQIEEHKRVAAEEAID*

IP11188.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14892-PA 409 GF14892-PA 1..375 1..314 612 41.9 Plus
Dana\GF18435-PA 630 GF18435-PA 4..120 3..120 218 33.9 Plus
Dana\GF15414-PA 580 GF15414-PA 4..161 3..147 171 29.4 Plus
Dana\GF22458-PA 101 GF22458-PA 5..97 3..96 156 33.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25126-PA 347 GG25126-PA 1..347 1..349 1175 69.6 Plus
Dere\GG18632-PA 317 GG18632-PA 92..223 3..135 225 35.1 Plus
Dere\GG17402-PA 642 GG17402-PA 4..120 3..120 222 34.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10832-PA 378 GH10832-PA 1..376 1..349 619 40.2 Plus
Dgri\GH12473-PA 212 GH12473-PA 4..145 3..148 252 36.1 Plus
Dgri\GH18223-PA 596 GH18223-PA 4..139 3..139 222 30.7 Plus
Dgri\GH12271-PA 196 GH12271-PA 5..131 20..146 217 35.7 Plus
Dgri\GH11341-PA 456 GH11341-PA 4..108 3..109 166 31.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42585-PA 349 CG42585-PA 1..349 1..349 1887 100 Plus
CG31835-PA 349 CG31835-PA 1..349 1..349 1887 100 Plus
CG3526-PC 221 CG3526-PC 18..147 2..132 221 31.3 Plus
CG3526-PA 229 CG3526-PA 26..155 2..132 221 31.3 Plus
Kcmf1-PI 599 CG11984-PI 4..120 3..120 218 33.9 Plus
Kcmf1-PH 599 CG11984-PH 4..120 3..120 218 33.9 Plus
Kcmf1-PG 599 CG11984-PG 4..120 3..120 218 33.9 Plus
Kcmf1-PF 599 CG11984-PF 4..120 3..120 218 33.9 Plus
Kcmf1-PE 599 CG11984-PE 4..120 3..120 218 33.9 Plus
Kcmf1-PD 599 CG11984-PD 4..120 3..120 218 33.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17346-PA 415 GI17346-PA 1..403 1..333 543 37.5 Plus
Dmoj\GI11155-PA 325 GI11155-PA 4..131 3..131 257 36.9 Plus
Dmoj\GI10177-PA 599 GI10177-PA 4..120 3..120 220 33.9 Plus
Dmoj\GI12847-PA 522 GI12847-PA 4..111 3..112 166 30.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:35:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19926-PA 154 GL19926-PA 7..137 5..135 213 33.1 Plus
Dper\GL19931-PA 201 GL19931-PA 9..142 8..140 212 31.6 Plus
Dper\GL19795-PA 201 GL19795-PA 9..142 8..140 212 31.6 Plus
Dper\GL12494-PA 160 GL12494-PA 4..120 3..120 201 33.1 Plus
Dper\GL21265-PA 474 GL21265-PA 4..112 3..112 159 29.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16514-PA 433 GA16514-PA 1..148 1..146 407 51.4 Plus
Dpse\GA17500-PA 199 GA17500-PA 9..142 8..140 221 32.4 Plus
Dpse\GA28470-PA 198 GA28470-PA 9..142 8..140 219 32.4 Plus
Dpse\GA28432-PA 154 GA28432-PA 7..137 5..135 218 33.8 Plus
Dpse\GA11311-PC 580 GA11311-PC 4..120 3..120 216 33.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15732-PA 349 GM15732-PA 1..349 1..349 1692 90.5 Plus
Dsec\GM26291-PA 644 GM26291-PA 4..120 3..120 217 33.9 Plus
Dsec\GM19251-PA 223 GM19251-PA 89..218 2..132 205 32.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23974-PA 349 GD23974-PA 1..349 1..349 1691 90.3 Plus
Dsim\GD20827-PA 628 GD20827-PA 4..120 3..120 217 33.9 Plus
Dsim\GD24739-PA 146 GD24739-PA 12..141 2..132 201 32.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16109-PA 410 GJ16109-PA 1..406 1..346 581 37.5 Plus
Dvir\GJ15286-PA 312 GJ15286-PA 4..131 3..131 260 36.9 Plus
Dvir\GJ10879-PA 608 GJ10879-PA 4..147 3..144 220 31.7 Plus
Dvir\GJ18179-PA 498 GJ18179-PA 4..111 3..112 168 31.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:35:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18299-PA 435 GK18299-PA 1..158 1..156 541 60.1 Plus
Dwil\GK11423-PA 620 GK11423-PA 4..120 3..120 215 33.9 Plus
Dwil\GK25525-PA 285 GK25525-PA 4..131 3..131 214 34.6 Plus
Dwil\GK18299-PA 435 GK18299-PA 299..420 217..341 150 31.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:35:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19043-PA 351 GE19043-PA 1..351 1..349 1218 70.1 Plus
Dyak\GE16285-PA 305 GE16285-PA 93..230 2..140 234 32.9 Plus
Dyak\GE24805-PA 645 GE24805-PA 4..120 3..120 217 33.9 Plus

IP11188.hyp Sequence

Translation from 108 to 1157

> IP11188.hyp
MGHRNICCNGCQMTIFQGSRFRCLRCVNYNLCDICYDHQIETEEHRANHP
MQLFPDSDDLVPLLYGEIPELVHLSNCFTCPHCGLLALTAKRFIEHVYVQ
HRVSNEYVVCPMCAGLSAAELVAIRHLSKHLLHNHIDHANYLEPDTPPLR
RIFTRNHMRHHRQSQLQTTPNSRIFDISVWLSTGRVSSDPQLLSNNDPPE
EAANSESLALGLSSGGPFEHDDDRYVLLQWIAQQKVQCHDTDESQRLRRT
LFVEHLLISMLCCEELQLPDGDRRIREGNGESDLDQENHSSLVKVMSVMS
LPWTGVWQTNQLDGSEGEGEIRAAKKDGVDLDKVQIEEHKRVAAEEAID*

IP11188.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG42585-PA 349 CG42585-PA 1..349 1..349 1887 100 Plus
CG31835-PA 349 CG31835-PA 1..349 1..349 1887 100 Plus
CG3526-PC 221 CG3526-PC 18..147 2..132 221 31.3 Plus
CG3526-PA 229 CG3526-PA 26..155 2..132 221 31.3 Plus
CG11984-PI 599 CG11984-PI 4..120 3..120 218 33.9 Plus