Clone IP11218 Report

Search the DGRC for IP11218

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:112
Well:18
Vector:pOT2
Associated Gene/TranscriptArt2-RA
Protein status:IP11218.pep: gold
Preliminary Size:1068
Sequenced Size:1463

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3675 2005-01-01 Successful iPCR screen
Art2 2008-04-29 Release 5.5 accounting
Art2 2008-08-15 Release 5.9 accounting
Art2 2008-12-18 5.12 accounting

Clone Sequence Records

IP11218.complete Sequence

1463 bp (1463 high quality bases) assembled on 2006-03-22

GenBank Submission: BT024987

> IP11218.complete
CAAAGCTAGCTTGCTACAACTGAAAATGTTAGAGGAACTTGCAAAAGACG
ACGAGAAGATGGATGGAAACCACACCGATGCTAATCAGATCATCAAGGAT
CGCCGAAGACAGGAGGAGCATTATTTCAAGCTTTATGGCCGCATTGAGAT
ACACGAATGGCTGTTGAAGGATTCAGTCCGAATTAAAGCCTACCGCGAGG
CCATCCAGCACAACGAGTTCTTCAGGCACAAGACTGTCCTGGATGTTGGC
TGCGGCATGGGCGTCCTTTCGATGTTCGCAGCCAAGGCGGGTTCCAAAAG
GGTCCTGGCAGTAGAGGCGGCCACCATTTCGGAATTTGCCCAACAGGTAG
TCCAGGATAATGAATTCGGCAGAGTTATACAGGTGATTCAGGGAAAAGTA
GAGGACATTGAACTGCCTGATGGGATCAAAAAGGTGGATATTATAGTGTG
CGACTGGATGGGCTCCTGCCTGTTTTCTGGAAATATGCTCGAGTCGTTAT
TATTTGCGCGGGACAAGTGGCTATCGGCCACAGGCCACATCTATCCGGAC
ACGGCGCAGCTTTATCTGGCGGCCATCAAGGGACGCGACCAGGATCTTGG
ATTCTGGCACGATGTGCACGGCTTCGACCTGTCCGCCATCCGGCGCAGAT
GCGAGTCCAAGGCGGTGGTGGAGCACGTGACCGGTGACCAGATGATGAGC
AGGGTGTGCCTGGTCAAATCGCTGGATCTGTACACCGAGCCCCGCCAATC
CGCCAAGTCTCGTTCGCTATTCGAGCTAAAGGTCAGCCGAAATGGCTGGG
TTCACGGCCTGGTGGCCTACTTTGATGTCGGATTCAGCAAGAGTACGCAA
AGGATCAGCTTCAGCACATCGCCCTCTGCTCCGTGGACCCATTGGAACCA
AACGGTCTTCTATCTGGAGACACCACTGCCTGTTAGGGCAGGTGAGTGCA
TCAAGGGCGTGCTCACCATGAAACCCAGCGAGGACAGCATCTTTGACACG
GAATTCGACATTTTTGTGAACTTCGATGGCCGTGAGAAATCGGTTACCAT
CCATCAGTCCTTTGTGCTCTCCGATCCCCTAACACTTTGTTGAGCCTGCA
ACAAAAGTGGCACACGAAATATCATCGGATCATGATAAAATGAACGACCA
GTAAAATAAAGTAAAAGCCAGCCACATTGCCAGTGGTGCAATATTTATAT
AATTTTATTGTGTGTAGGCACACATAAAAACATCTCTATGCAAGAATTCA
GTGGCCTACATATGCGAGGGATTCAGGAAAGAGCTACGGGCTCAATAACT
TTCCAACACCCTGAATCTTGGAAAAAGGTGACTAAAAGTACGCAACAATA
TATTTGTGTGCACAAGCACACTAATAAAAAATGCTTATCCTCCACTTAAA
ATGTAAATAAAACAAAATTATAATCTCACCTTGAATAAAAAAAAAAAAAA
AAAAAAAAAAAAA

IP11218.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
Art2-RA 1468 Art2-RA 41..1468 1..1428 7140 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4276906..4277879 1436..462 4735 99.3 Minus
chr2L 23010047 chr2L 4278005..4278238 462..229 1140 99.1 Minus
chr2L 23010047 chr2L 4278293..4278524 232..1 1115 98.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:05:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4277694..4278670 1438..462 4885 100 Minus
2L 23513712 2L 4278796..4279029 462..229 1170 100 Minus
2L 23513712 2L 4279084..4279315 232..1 1160 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4277694..4278670 1438..462 4885 100 Minus
2L 23513712 2L 4278796..4279029 462..229 1170 100 Minus
2L 23513712 2L 4279084..4279315 232..1 1160 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:39:38 has no hits.

IP11218.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:40:26 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4278005..4278234 233..462 99 <- Minus
chr2L 4276906..4277878 463..1436 99 <- Minus
chr2L 4278293..4278524 1..232 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:48:34 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:59:48 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:56:32 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:40:21 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:17:13 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:41:59 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:59:48 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1436 1..1436 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:56:32 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1436 1..1436 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:40:21 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1068 26..1093 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:17:13 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
Art2-RA 1..1436 1..1436 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:40:26 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4277696..4278669 463..1436 100 <- Minus
2L 4278796..4279025 233..462 100 <- Minus
2L 4279084..4279315 1..232 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:40:26 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4277696..4278669 463..1436 100 <- Minus
2L 4278796..4279025 233..462 100 <- Minus
2L 4279084..4279315 1..232 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:40:26 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4277696..4278669 463..1436 100 <- Minus
2L 4278796..4279025 233..462 100 <- Minus
2L 4279084..4279315 1..232 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:56:32 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4277696..4278669 463..1436 100 <- Minus
arm_2L 4278796..4279025 233..462 100 <- Minus
arm_2L 4279084..4279315 1..232 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:19:17 Download gff for IP11218.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4277696..4278669 463..1436 100 <- Minus
2L 4278796..4279025 233..462 100 <- Minus
2L 4279084..4279315 1..232 100   Minus

IP11218.hyp Sequence

Translation from 0 to 1092

> IP11218.hyp
KASLLQLKMLEELAKDDEKMDGNHTDANQIIKDRRRQEEHYFKLYGRIEI
HEWLLKDSVRIKAYREAIQHNEFFRHKTVLDVGCGMGVLSMFAAKAGSKR
VLAVEAATISEFAQQVVQDNEFGRVIQVIQGKVEDIELPDGIKKVDIIVC
DWMGSCLFSGNMLESLLFARDKWLSATGHIYPDTAQLYLAAIKGRDQDLG
FWHDVHGFDLSAIRRRCESKAVVEHVTGDQMMSRVCLVKSLDLYTEPRQS
AKSRSLFELKVSRNGWVHGLVAYFDVGFSKSTQRISFSTSPSAPWTHWNQ
TVFYLETPLPVRAGECIKGVLTMKPSEDSIFDTEFDIFVNFDGREKSVTI
HQSFVLSDPLTLC*

IP11218.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:36:55
Subject Length Description Subject Range Query Range Score Percent Strand
Art2-PB 355 CG3675-PB 1..355 9..363 1862 100 Plus
Art2-PA 355 CG3675-PA 1..355 9..363 1862 100 Plus
Art1-PA 376 CG6554-PA 36..362 18..343 768 46.4 Plus
Art6-PA 341 CG9927-PA 4..337 26..354 705 42.8 Plus
Art3-PB 474 CG6563-PB 117..464 6..339 469 32.9 Plus

IP11218.pep Sequence

Translation from 25 to 1092

> IP11218.pep
MLEELAKDDEKMDGNHTDANQIIKDRRRQEEHYFKLYGRIEIHEWLLKDS
VRIKAYREAIQHNEFFRHKTVLDVGCGMGVLSMFAAKAGSKRVLAVEAAT
ISEFAQQVVQDNEFGRVIQVIQGKVEDIELPDGIKKVDIIVCDWMGSCLF
SGNMLESLLFARDKWLSATGHIYPDTAQLYLAAIKGRDQDLGFWHDVHGF
DLSAIRRRCESKAVVEHVTGDQMMSRVCLVKSLDLYTEPRQSAKSRSLFE
LKVSRNGWVHGLVAYFDVGFSKSTQRISFSTSPSAPWTHWNQTVFYLETP
LPVRAGECIKGVLTMKPSEDSIFDTEFDIFVNFDGREKSVTIHQSFVLSD
PLTLC*

IP11218.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14882-PA 369 GF14882-PA 27..369 13..355 1261 66.5 Plus
Dana\GF17088-PA 372 GF17088-PA 44..358 25..335 793 47.3 Plus
Dana\GF18899-PA 348 GF18899-PA 4..345 9..346 674 41.1 Plus
Dana\GF17144-PA 531 GF17144-PA 134..451 27..331 470 33.8 Plus
Dana\GF11802-PA 520 GF11802-PA 209..511 30..330 455 33.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24386-PA 355 GG24386-PA 1..355 1..355 1641 84.8 Plus
Dere\GG17264-PA 397 GG17264-PA 61..383 14..335 799 46.6 Plus
Dere\GG17013-PA 345 GG17013-PA 9..341 19..346 722 43.2 Plus
Dere\GG20792-PA 517 GG20792-PA 206..507 30..331 491 36.2 Plus
Dere\GG17314-PA 530 GG17314-PA 134..451 27..331 476 34.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:51:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19565-PA 382 GH19565-PA 54..368 25..335 790 46.7 Plus
Dgri\GH18753-PA 507 GH18753-PA 181..477 14..311 526 36.2 Plus
Dgri\GH16647-PA 336 GH16647-PA 26..326 40..344 486 35 Plus
Dgri\GH14177-PA 544 GH14177-PA 143..460 27..331 476 34.1 Plus
Dgri\GH13621-PA 342 GH13621-PA 4..274 33..297 396 34.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
Art2-PB 355 CG3675-PB 1..355 1..355 1862 100 Plus
Art2-PA 355 CG3675-PA 1..355 1..355 1862 100 Plus
Art1-PA 376 CG6554-PA 36..362 10..335 768 46.4 Plus
Art6-PA 341 CG9927-PA 4..337 18..346 705 42.8 Plus
Art3-PB 474 CG6563-PB 163..464 30..331 467 35.2 Plus
Art3-PA 516 CG6563-PA 205..506 30..331 467 35.2 Plus
Art4-PB 530 CG5358-PB 144..451 33..331 456 34.5 Plus
Art4-PA 530 CG5358-PA 144..451 33..331 456 34.5 Plus
CG32152-PC 357 CG32152-PC 13..314 39..337 388 32 Plus
CG32152-PB 357 CG32152-PB 13..314 39..337 388 32 Plus
Art8-PA 341 CG16840-PA 5..273 33..297 375 35 Plus
Art9-PA 313 CG9929-PA 10..305 41..329 357 30.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23860-PA 387 GI23860-PA 59..373 25..335 800 47 Plus
Dmoj\GI24669-PA 431 GI24669-PA 77..401 1..311 517 33.7 Plus
Dmoj\GI22087-PA 539 GI22087-PA 142..459 27..331 472 34.2 Plus
Dmoj\GI11605-PA 338 GI11605-PA 28..326 40..344 468 33.7 Plus
Dmoj\GI12675-PA 632 GI12675-PA 308..581 48..317 448 35.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16439-PA 366 GL16439-PA 11..357 8..348 1054 57.9 Plus
Dper\GL21930-PA 392 GL21930-PA 53..378 14..335 789 45.7 Plus
Dper\GL23322-PA 351 GL23322-PA 1..351 12..352 717 41.3 Plus
Dper\GL27288-PA 531 GL27288-PA 134..451 27..331 474 34.2 Plus
Dper\GL12077-PA 514 GL12077-PA 166..484 2..311 450 33 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17605-PA 366 GA17605-PA 13..357 3..348 1069 57.5 Plus
Dpse\GA19682-PA 392 GA19682-PA 53..378 14..335 789 45.7 Plus
Dpse\GA27221-PA 351 GA27221-PA 1..351 12..352 703 41 Plus
Dpse\GA18823-PA 531 GA18823-PA 134..451 27..331 474 34.2 Plus
Dpse\GA25842-PA 340 GA25842-PA 28..325 40..344 472 35.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18100-PA 355 GM18100-PA 1..355 1..355 1774 92.1 Plus
Dsec\GM26148-PA 397 GM26148-PA 61..383 14..335 786 46.3 Plus
Dsec\GM25897-PA 444 GM25897-PA 107..443 18..349 707 41.8 Plus
Dsec\GM25795-PA 516 GM25795-PA 187..516 13..342 485 33.9 Plus
Dsec\GM26200-PA 530 GM26200-PA 134..451 27..331 475 34.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:51:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22717-PA 355 GD22717-PA 1..355 1..355 1795 92.7 Plus
Dsim\GD20702-PA 397 GD20702-PA 61..383 14..335 802 46.9 Plus
Dsim\GD20467-PA 341 GD20467-PA 15..340 29..349 705 42.6 Plus
Dsim\GD20372-PA 477 GD20372-PA 148..477 13..342 483 33.9 Plus
Dsim\GD20747-PA 530 GD20747-PA 134..451 27..331 475 34.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10573-PA 381 GJ10573-PA 53..367 25..335 795 46.7 Plus
Dvir\GJ24043-PA 508 GJ24043-PA 187..496 19..329 486 32.5 Plus
Dvir\GJ24202-PA 538 GJ24202-PA 141..458 27..331 472 34.2 Plus
Dvir\GJ11284-PA 311 GJ11284-PA 1..299 47..344 470 34.6 Plus
Dvir\GJ12659-PA 473 GJ12659-PA 131..455 13..349 410 31.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24448-PA 383 GK24448-PA 38..374 20..348 1057 58.8 Plus
Dwil\GK13389-PA 382 GK13389-PA 54..379 25..346 803 46.3 Plus
Dwil\GK22483-PA 344 GK22483-PA 17..325 33..335 704 44 Plus
Dwil\GK17166-PA 331 GK17166-PA 17..304 40..329 470 33.3 Plus
Dwil\GK14504-PA 533 GK14504-PA 136..453 27..331 470 33.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:51:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14754-PA 355 GE14754-PA 1..355 1..355 1607 85.6 Plus
Dyak\GE24666-PA 378 GE24666-PA 40..364 14..335 793 46.6 Plus
Dyak\GE24405-PA 345 GE24405-PA 19..341 29..346 739 44.9 Plus
Dyak\GE26400-PA 516 GE26400-PA 180..506 1..331 488 33.6 Plus
Dyak\GE24716-PA 530 GE24716-PA 134..451 27..331 478 34.5 Plus