Clone IP11267 Report

Search the DGRC for IP11267

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:112
Well:67
Vector:pOT2
Associated Gene/Transcriptmos-RA
Protein status:IP11267.pep: gold
Preliminary Size:1095
Sequenced Size:1359

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8767 2005-01-01 Successful iPCR screen
mos 2008-04-29 Release 5.5 accounting
mos 2008-08-15 Release 5.9 accounting
mos 2008-12-18 5.12 accounting

Clone Sequence Records

IP11267.complete Sequence

1359 bp (1359 high quality bases) assembled on 2006-06-07

GenBank Submission: BT025923

> IP11267.complete
AAAAACTTGCAGATGGCTTAGATATGGGAGACCTTTTATTGAACACACCG
AAAAGAAAGCAACTGCTCAAGGATGGTCCACCCGTACCCACTAGGTGTCA
GGTACTCGGACGTGGAGCCTACGGCACCGTTTTCAAAGCTATTTACAGAG
ATCGCTCCGTTGCTGTTAAGATAATTCGAGCCCAGGCAGCCTCAACTTTG
CACAATGAGTCTCATTTGCTGAATCTGGAGCACAGGAACATTGTACGCCT
TCTTAAGCTGGAGTCTGCGGCAGATTTCGGCTTGGTCATCATGGAATGTC
CGAGGGGACAAAGTCTGCAGAGGATCGTTGACACTTTGGCTCTACCACTG
ATGCACAGGGTCTTAATAACTCTGGATGTGGTTGCTGCTCTGAGATACTG
CCATTCCCAAAACGTATTACATCTGGATGTAAAGCCAACCAATATATTGG
TTGCCCTGGGAACAAAGTCTTCCATAACTTGCAATTCCTCGAAGATCAAA
GTGAAGCGAAGCTACATCTGCAAGCTCTGTGATTTCGGCTCCTCCATCGA
GATGGGCGAATTTTGTGCTTGGCAGGAGCCAAGCGTGGCCAAAGGAACCC
TGAGATACATGTCTCCAGAAGCTCTGCGATCGGATACCCTTACCGAAGCC
TCCGATATTTACTCCCTGGGCATTACAATGTGGCAACTGCAAGCGCGTAG
ATTGCCCTATCACACACTCGATTGCAATGAGACCATAGCCTACCAGGTGG
TCAAGCACGAACTGCGTCCGGACAACTATCATCAACTAAAGATTCTGGCT
TTAGACTCGCCCATTGACTGCGATTGGGATTTGGCCCATGAAAGCACCGC
CAACGTGATCTGCAGAAGGGCAAATACCTCGGCGCGCCGTAATCTAAGCC
TCGATCCATCTTACACCGTCGGCCGTGATCTGAAAAAGAAGCGCCACCGG
AACCGATTAGCACTCCACTTTGATAGTCCGGCGCCGGAGGGCAGTGCGTG
CTCGGAAAGCGCTTACTCCCAATTATACAAGAGCTGTTGGGTCAGCGCCC
CGGAATTACGATTGAGTTCTATCCAGCTGAAGCATGAGCTGGAATTCATT
CTCTGTCATAGCACCTAGGTGATAGTCTAAGTGATCGTGTGTGTGTTTGC
ATTTTATGTTATTGATTTCGTAGTACATACCCGTATTTATGTAAGATTTT
ACCAACCCGCTGCGATAAACGATTTTCGAGAAGCGTGGCCTCTGGTTAGG
TCAATAATCCAATTTTCTGTAACTTCTTTTTGTTTATTTTGTACTCGCTA
CGCTAAGAAAATACATTTATAATGTTCATAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

IP11267.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:13:48
Subject Length Description Subject Range Query Range Score Percent Strand
mos-RA 1439 mos-RA 40..1369 1..1330 6650 100 Plus
CG12488-RA 2559 CG12488-RA 2492..2559 1330..1263 340 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8638690..8639654 1329..365 4735 99.4 Minus
chr2R 21145070 chr2R 8639711..8639926 364..149 1080 100 Minus
chr2R 21145070 chr2R 8639980..8640129 150..1 750 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:06:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12751482..12752447 1330..365 4830 100 Minus
2R 25286936 2R 12752507..12752722 364..149 1080 100 Minus
2R 25286936 2R 12752776..12752925 150..1 750 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12752681..12753646 1330..365 4830 100 Minus
2R 25260384 2R 12753706..12753921 364..149 1080 100 Minus
2R 25260384 2R 12753975..12754124 150..1 750 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:11:52 has no hits.

IP11267.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:12:46 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8638690..8639654 365..1329 99 <- Minus
chr2R 8639711..8639924 151..364 100 <- Minus
chr2R 8639980..8640129 1..150 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:48:54 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:22:31 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:45:48 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:41:07 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:31 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:50:52 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:22:30 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 12..1340 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:45:48 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 12..1340 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:41:07 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 1..1095 24..1118 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:31 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
mos-RA 12..1340 1..1329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:12:46 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12751483..12752447 365..1329 100 <- Minus
2R 12752507..12752720 151..364 100 <- Minus
2R 12752776..12752925 1..150 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:12:46 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12751483..12752447 365..1329 100 <- Minus
2R 12752507..12752720 151..364 100 <- Minus
2R 12752776..12752925 1..150 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:12:46 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12751483..12752447 365..1329 100 <- Minus
2R 12752507..12752720 151..364 100 <- Minus
2R 12752776..12752925 1..150 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:45:48 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8640281..8640430 1..150 100   Minus
arm_2R 8638988..8639952 365..1329 100 <- Minus
arm_2R 8640012..8640225 151..364 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:50:51 Download gff for IP11267.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12752682..12753646 365..1329 100 <- Minus
2R 12753706..12753919 151..364 100 <- Minus
2R 12753975..12754124 1..150 100   Minus

IP11267.hyp Sequence

Translation from 2 to 1117

> IP11267.hyp
KLADGLDMGDLLLNTPKRKQLLKDGPPVPTRCQVLGRGAYGTVFKAIYRD
RSVAVKIIRAQAASTLHNESHLLNLEHRNIVRLLKLESAADFGLVIMECP
RGQSLQRIVDTLALPLMHRVLITLDVVAALRYCHSQNVLHLDVKPTNILV
ALGTKSSITCNSSKIKVKRSYICKLCDFGSSIEMGEFCAWQEPSVAKGTL
RYMSPEALRSDTLTEASDIYSLGITMWQLQARRLPYHTLDCNETIAYQVV
KHELRPDNYHQLKILALDSPIDCDWDLAHESTANVICRRANTSARRNLSL
DPSYTVGRDLKKKRHRNRLALHFDSPAPEGSACSESAYSQLYKSCWVSAP
ELRLSSIQLKHELEFILCHST*

IP11267.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:37:37
Subject Length Description Subject Range Query Range Score Percent Strand
mos-PA 364 CG8767-PA 1..364 8..371 1895 100 Plus
Takl1-PA 393 CG31421-PA 17..220 35..251 231 29.6 Plus
wnd-PD 950 CG8789-PD 135..328 30..245 228 28.9 Plus
wnd-PC 977 CG8789-PC 162..355 30..245 228 28.9 Plus
wnd-PB 977 CG8789-PB 162..355 30..245 228 28.9 Plus

IP11267.pep Sequence

Translation from 23 to 1117

> IP11267.pep
MGDLLLNTPKRKQLLKDGPPVPTRCQVLGRGAYGTVFKAIYRDRSVAVKI
IRAQAASTLHNESHLLNLEHRNIVRLLKLESAADFGLVIMECPRGQSLQR
IVDTLALPLMHRVLITLDVVAALRYCHSQNVLHLDVKPTNILVALGTKSS
ITCNSSKIKVKRSYICKLCDFGSSIEMGEFCAWQEPSVAKGTLRYMSPEA
LRSDTLTEASDIYSLGITMWQLQARRLPYHTLDCNETIAYQVVKHELRPD
NYHQLKILALDSPIDCDWDLAHESTANVICRRANTSARRNLSLDPSYTVG
RDLKKKRHRNRLALHFDSPAPEGSACSESAYSQLYKSCWVSAPELRLSSI
QLKHELEFILCHST*

IP11267.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:17:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13096-PA 335 GF13096-PA 2..332 13..360 1256 71.1 Plus
Dana\GF10720-PA 985 GF10720-PA 171..359 28..238 238 29.6 Plus
Dana\GF18313-PA 458 GF18313-PA 17..206 28..232 235 28 Plus
Dana\GF17624-PA 1357 GF17624-PA 583..804 23..250 235 29.3 Plus
Dana\GF15984-PA 732 GF15984-PA 25..233 28..249 230 28.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22554-PA 364 GG22554-PA 1..364 1..364 1832 94.2 Plus
Dere\GG13387-PA 980 GG13387-PA 165..358 23..238 244 29.4 Plus
Dere\Pk92B-PA 1361 GG23570-PA 586..807 23..250 243 29.8 Plus
Dere\GG15158-PA 396 GG15158-PA 16..205 31..232 241 30.8 Plus
Dere\GG17579-PA 681 GG17579-PA 25..233 28..249 230 28.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19954-PA 415 GH19954-PA 35..410 4..360 1039 57.5 Plus
Dgri\GH14621-PA 1013 GH14621-PA 173..366 23..238 234 29.4 Plus
Dgri\GH19234-PA 839 GH19234-PA 550..777 26..261 219 28.3 Plus
Dgri\GH17735-PA 693 GH17735-PA 22..235 23..249 210 26 Plus
Dgri\GH16508-PA 1352 GH16508-PA 582..802 23..249 203 27.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:58
Subject Length Description Subject Range Query Range Score Percent Strand
Mos-PA 364 CG8767-PA 1..364 1..364 1895 100 Plus
Takl1-PA 393 CG31421-PA 17..220 28..244 231 29.6 Plus
wnd-PD 950 CG8789-PD 135..328 23..238 228 28.9 Plus
wnd-PC 977 CG8789-PC 162..355 23..238 228 28.9 Plus
wnd-PB 977 CG8789-PB 162..355 23..238 228 28.9 Plus
wnd-PA 977 CG8789-PA 162..355 23..238 228 28.9 Plus
Tak1-PA 678 CG18492-PA 25..233 28..249 217 28.3 Plus
Takl2-PB 281 CG4803-PB 17..227 26..250 213 27 Plus
PKD-PF 836 CG7125-PF 547..744 26..230 207 30.1 Plus
PKD-PE 836 CG7125-PE 547..744 26..230 207 30.1 Plus
PKD-PD 836 CG7125-PD 547..744 26..230 207 30.1 Plus
PKD-PC 836 CG7125-PC 547..744 26..230 207 30.1 Plus
PKD-PB 836 CG7125-PB 547..744 26..230 207 30.1 Plus
PKD-PA 836 CG7125-PA 547..744 26..230 207 30.1 Plus
PKD-PG 906 CG7125-PG 547..744 26..230 207 30.1 Plus
Ask1-PB 1196 CG4720-PB 420..656 24..266 207 29.2 Plus
Ask1-PC 1363 CG4720-PC 587..823 24..266 207 29.2 Plus
Myt1-PA 533 CG32417-PA 104..328 24..264 176 27.4 Plus
fu-PA 805 CG6551-PA 9..215 27..246 173 27 Plus
Pask-PA 985 CG3105-PA 577..791 23..242 169 27.4 Plus
slpr-PD 1148 CG2272-PD 133..349 26..247 166 27.7 Plus
slpr-PC 1148 CG2272-PC 133..349 26..247 166 27.7 Plus
slpr-PA 1148 CG2272-PA 133..349 26..247 166 27.7 Plus
slpr-PB 1155 CG2272-PB 133..349 26..247 166 27.7 Plus
Cdk5-PA 294 CG8203-PA 6..195 24..222 165 31.3 Plus
CaMKII-PK 482 CG18069-PK 20..262 28..292 163 24.7 Plus
CaMKII-PH 490 CG18069-PH 20..262 28..292 163 24.7 Plus
CaMKII-PC 490 CG18069-PC 20..262 28..292 163 24.7 Plus
CaMKII-PA 490 CG18069-PA 20..262 28..292 163 24.7 Plus
CaMKII-PM 504 CG18069-PM 20..262 28..292 163 24.7 Plus
CaMKII-PB 509 CG18069-PB 20..262 28..292 163 24.7 Plus
CaMKII-PE 509 CG18069-PE 20..262 28..292 163 24.7 Plus
CaMKII-PG 516 CG18069-PG 20..262 28..292 163 24.7 Plus
CaMKII-PL 522 CG18069-PL 20..262 28..292 163 24.7 Plus
CaMKII-PI 530 CG18069-PI 20..262 28..292 163 24.7 Plus
CaMKII-PD 530 CG18069-PD 20..262 28..292 163 24.7 Plus
CaMKII-PJ 531 CG18069-PJ 20..262 28..292 163 24.7 Plus
Mekk1-PD 1478 CG7717-PD 1195..1406 28..242 159 25.2 Plus
Mekk1-PB 1571 CG7717-PB 1288..1499 28..242 159 25.2 Plus
FER-PD 393 CG8874-PD 137..321 28..222 158 27.5 Plus
FER-PC 475 CG8874-PC 219..403 28..222 158 27.5 Plus
FER-PB 804 CG8874-PB 548..732 28..222 158 27.5 Plus
FER-PE 871 CG8874-PE 615..799 28..222 158 27.5 Plus
FER-PF 872 CG8874-PF 616..800 28..222 158 27.5 Plus
FER-PA 1325 CG8874-PA 1069..1253 28..222 158 27.5 Plus
Pak-PJ 704 CG10295-PJ 431..624 23..229 156 27.1 Plus
Pak-PE 704 CG10295-PE 431..624 23..229 156 27.1 Plus
Pak-PB 704 CG10295-PB 431..624 23..229 156 27.1 Plus
Pak-PA 704 CG10295-PA 431..624 23..229 156 27.1 Plus
Pak-PC 704 CG10295-PC 431..624 23..229 156 27.1 Plus
Pak-PI 840 CG10295-PI 567..760 23..229 156 27.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19911-PA 380 GI19911-PA 1..380 4..364 1049 57.7 Plus
Dmoj\GI13508-PA 994 GI13508-PA 171..359 28..238 239 29.6 Plus
Dmoj\GI24268-PA 849 GI24268-PA 560..787 26..261 219 28.3 Plus
Dmoj\GI15482-PA 697 GI15482-PA 25..233 28..249 216 27.4 Plus
Dmoj\GI22433-PA 1337 GI22433-PA 582..803 23..250 206 27.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17728-PA 386 GL17728-PA 2..375 3..364 1243 65.6 Plus
Dper\GL12207-PA 941 GL12207-PA 582..803 23..250 243 29.8 Plus
Dper\GL20878-PA 640 GL20878-PA 164..357 23..238 240 29.4 Plus
Dper\GL23779-PA 293 GL23779-PA 20..230 26..249 233 28 Plus
Dper\GL15931-PA 473 GL15931-PA 25..233 28..249 230 28.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21305-PC 388 GA21305-PC 4..377 3..364 1240 65.3 Plus
Dpse\Pk92B-PB 1194 GA18383-PB 419..640 23..250 244 29.8 Plus
Dpse\Pk92B-PA 1357 GA18383-PA 582..803 23..250 243 29.8 Plus
Dpse\GA21324-PA 994 GA21324-PA 164..357 23..238 239 29 Plus
Dpse\GA18443-PA 293 GA18443-PA 20..252 26..270 233 27.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20338-PA 364 GM20338-PA 1..364 1..364 1870 96.4 Plus
Dsec\GM17139-PA 980 GM17139-PA 165..358 23..238 243 29.4 Plus
Dsec\GM23162-PA 393 GM23162-PA 15..220 26..244 234 28.9 Plus
Dsec\GM22666-PA 680 GM22666-PA 25..233 28..249 232 28.3 Plus
Dsec\GM26871-PA 1367 GM26871-PA 590..811 23..250 231 29.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25816-PA 364 GD25816-PA 1..364 1..364 1877 96.7 Plus
Dsim\GD12264-PA 980 GD12264-PA 165..358 23..238 243 29.4 Plus
Dsim\GD20035-PA 393 GD20035-PA 15..220 26..244 238 28.9 Plus
Dsim\Tak1-PA 451 GD15532-PA 25..233 28..249 232 28.3 Plus
Dsim\GD19320-PA 1336 GD19320-PA 590..811 23..250 231 29.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:17:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15080-PA 369 GJ15080-PA 2..364 11..360 1099 60.9 Plus
Dvir\GJ11870-PA 996 GJ11870-PA 169..362 23..238 236 29.4 Plus
Dvir\GJ19194-PA 675 GJ19194-PA 20..233 23..249 227 27.7 Plus
Dvir\GJ10840-PA 841 GJ10840-PA 552..779 26..261 219 28.3 Plus
Dvir\GJ17190-PA 216 GJ17190-PA 1..209 28..242 216 28.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21687-PA 326 GK21687-PA 11..321 4..340 904 53.9 Plus
Dwil\GK25814-PA 1017 GK25814-PA 170..363 23..238 238 29.4 Plus
Dwil\Pk92B-PA 1380 GK22362-PA 585..806 23..250 236 29.3 Plus
Dwil\GK20056-PA 714 GK20056-PA 36..249 23..249 222 27.7 Plus
Dwil\GK11499-PA 842 GK11499-PA 553..780 26..261 220 28.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:17:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13424-PA 364 GE13424-PA 1..364 1..364 1837 94.5 Plus
Dyak\GE22480-PA 994 GE22480-PA 179..372 23..238 243 29.4 Plus
Dyak\GE22767-PA 357 GE22767-PA 112..305 23..238 242 28.9 Plus
Dyak\GE25632-PA 1363 GE25632-PA 586..807 23..250 242 29.8 Plus
Dyak\Tak1-PA 676 GE15342-PA 25..233 28..249 233 28.7 Plus