Clone IP11319 Report

Search the DGRC for IP11319

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:113
Well:19
Vector:pOT2
Associated Gene/TranscriptCG3769-RA
Protein status:IP11319.pep: gold
Preliminary Size:1107
Sequenced Size:1349

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3769 2005-01-01 Successful iPCR screen
CG3769 2008-04-29 Release 5.5 accounting
CG3769 2008-08-15 Release 5.9 accounting
CG3769 2008-12-18 5.12 accounting

Clone Sequence Records

IP11319.complete Sequence

1349 bp (1349 high quality bases) assembled on 2005-05-04

GenBank Submission: BT022340

> IP11319.complete
TAACGGTCAGTTTGATATTGCCTAGAGTTGCCACTCAGTCGCAGTTGCTA
GTAGCAACCGTTTTAAATGCAAAACAAACCGCAGTAGTTTAGTTTATGCC
CTTTTCCTGCGATGCGCTTGCCGCTAATCTTTCATAGCCTGCACCAGCGT
CTTCAAAAAATGTTTGTAAAGAGAACTGAGGGCGGCGAAAGTGCCACGCC
CAGCATTCAGGACATCGCCGGTCGACTGGCGGAGGAGCAGCAGCGGCTTC
GCCAATTGGAGGCCACAACGACTCCCAAAGAGCGGACAATTCTTGTCTTG
GGAAGCAAGTGTGTGGGTAAGACGACGGCCATTAATAAGTTCTTTGATCG
CGAGGAACACGCAACGCGGCCAACTCTAGCACTGGAGTACAGCTTTGGAC
GACGGATTGGCAGTGGAAAGTCACCGCAGGTGATGAACGTTTGGGAACTG
GGCTCCCTGGACAATGCCGAGCAATTGCTGGAAGTACCAATGCGGACACA
TGGTTTGCAGCAACTAGCCGTCATCCTTATGCTAGATCTCTCCCAGCCAC
AGCGATTTTGGACGGATTTGGAGTGCGCATACAAGGGACTGAGGGATACG
GCGCAGCAGATGATGGAGAAGGTAACACCGGAGCTTAGGGAAATCCTCGA
ACAGCGAACAGTGGAGCGAGTGGGTCAGCAGAACAAAGATTCGGAAAAAC
TAGACCCTCTGCCCTTTCCAGTGATAATTGTCGGTGGGAAGTACGATGTG
TTTTCTGGTTTCGATCCTATTATCAGGAAGCACACCTGCCGCTGCTTGCG
ATCGATGGCCCACCTCATAGGTGGCGCATTGCTGTTCTATTCCCAGAAGA
TGCCCAAGTTGGCCAAGGTCCTGAGGGACACCATTTGTCACTTGGGATTT
GGCAGTCCTGCTCATCCGTTCCGCTCTCATGTCGTGGACTTCAATGAACC
ACTGTGCATTTGGTTTGGAACGGACAGTTGGTCGAAAATTGGTGATACTG
GCGCCCAAAGTGTGGAGCGAATTGGAGCCACATTCGGAATGGAAGTACCG
CAGCTGCAGCTAGAGAAGCAGAAGCTAAAAGAAACCACCGATCCGGCCAA
GGACCCTGGTTTCAAGGAGTTAGTCATCGATGAGATCCGATCGCAGAAGA
ACGAGGAACTCGCAGGATTAATGAGGGATGTCTTGCTGCGCGGAAAGTTC
GAAAGTGTTCAAACTTAATAAGCGGCTGGGATTAAGCAAAGATGTACCTC
AAAGTATTCTAAAATATCCAAAACAAAACTGTCATTTGATATTGTAAGTT
ACATACCCCTAAATTAAATGTTTAGAAAGCTGTAAAAAAAAAAAAAAAA

IP11319.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:24:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-RA 1225 CG3769-RA 1..1225 109..1333 6125 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9434759..9435777 315..1333 4990 99.3 Plus
chr2L 23010047 chr2L 9434334..9434649 1..316 1580 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:06:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9435824..9436843 315..1334 5100 100 Plus
2L 23513712 2L 9435399..9435714 1..316 1580 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9435824..9436843 315..1334 5100 100 Plus
2L 23513712 2L 9435399..9435714 1..316 1580 100 Plus
Blast to na_te.dros performed on 2019-03-16 23:34:36 has no hits.

IP11319.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:35:28 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9434334..9434648 1..315 100 -> Plus
chr2L 9434760..9435777 316..1333 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:49:04 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:42:31 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:44:56 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:22:01 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:52:18 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:15:25 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:42:31 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1222 112..1333 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:44:56 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1333 1..1333 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:02 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1107 112..1218 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:52:18 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
CG3769-RA 1..1333 1..1333 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:28 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9435399..9435713 1..315 100 -> Plus
2L 9435825..9436842 316..1333 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:28 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9435399..9435713 1..315 100 -> Plus
2L 9435825..9436842 316..1333 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:35:28 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9435399..9435713 1..315 100 -> Plus
2L 9435825..9436842 316..1333 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:44:56 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9435399..9435713 1..315 100 -> Plus
arm_2L 9435825..9436842 316..1333 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:04:17 Download gff for IP11319.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9435399..9435713 1..315 100 -> Plus
2L 9435825..9436842 316..1333 100   Plus

IP11319.hyp Sequence

Translation from 111 to 1217

> IP11319.hyp
MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLE
ATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIG
SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW
TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL
PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKL
AKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS
VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEEL
AGLMRDVLLRGKFESVQT*

IP11319.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:37:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-PA 368 CG3769-PA 1..368 1..368 1908 100 Plus

IP11319.pep Sequence

Translation from 111 to 1217

> IP11319.pep
MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLE
ATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIG
SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW
TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL
PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKL
AKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS
VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEEL
AGLMRDVLLRGKFESVQT*

IP11319.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:32:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22735-PA 369 GF22735-PA 1..369 1..368 1681 82.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25350-PA 352 GG25350-PA 1..351 17..367 1744 92.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13023-PA 359 GH13023-PA 1..358 17..367 1332 70.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG3769-PA 368 CG3769-PA 1..368 1..368 1908 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17639-PA 372 GI17639-PA 1..370 1..366 1341 68.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26151-PA 170 GL26151-PA 1..170 1..170 776 84.1 Plus
Dper\GL26152-PA 154 GL26152-PA 2..154 216..368 623 78.4 Plus
Dper\GL18577-PA 87 GL18577-PA 1..68 1..68 276 79.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17674-PA 369 GA17674-PA 1..369 1..368 1554 79.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17453-PA 368 GM17453-PA 1..368 1..368 1904 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23605-PA 368 GD23605-PA 1..368 1..368 1901 95.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18204-PA 371 GJ18204-PA 1..370 1..367 1374 68.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24206-PA 356 GK24206-PA 1..356 17..368 1416 75.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:32:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18841-PA 368 GE18841-PA 1..368 1..368 1830 91.8 Plus