Clone IP11573 Report

Search the DGRC for IP11573

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:115
Well:73
Vector:pOT2
Associated Gene/TranscriptCG9308-RA
Protein status:IP11573.pep: gold
Preliminary Size:1029
Sequenced Size:864

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9308 2005-01-01 Successful iPCR screen
CG9308 2008-04-29 Release 5.5 accounting
CG9308 2008-08-15 Release 5.9 accounting
CG9308 2008-12-18 5.12 accounting

Clone Sequence Records

IP11573.complete Sequence

864 bp (864 high quality bases) assembled on 2005-02-26

GenBank Submission: BT022416

> IP11573.complete
AATAAATATATACACTGGATTTATGTGTATATACTAATGTATATTGAGTC
CCGGCCGCAAAACGAAATAAATTGAAGATGCTGTCAGCTATTGTCTTAGT
GTTAGTGCTTTTTCAAGCGGCTTGTGGCTTCATCGTTACCCTGGATGCCC
ACGAGACGATGTGCTTCTACGATCATGCCAATGTCAGCGACAAGGTGACC
GTGTCCTTCGAGGTAATGGAAGGTGGCTTCAAGGATGTGGGCGTGGAGAT
TGCTGGACCAGACGACGATCGCCTGCACCACTCCAAGCAGGACACCATGG
GCAGCTTCACCTTTACGGCCATGAAAGAGGGACGGTACCAATTGTGCTTC
GACAATAAGATGTCCACGATGACGCCCAAGATCCTAATGTTCCAATTTCA
CGTTGCCAGGGCCATTGAGTTCTACATGGACTCCTCGAAGCGAGTTGACG
ACGTCATCGAGCAGGCGACGGTCCAATCGATGATCAACCAACTCTCCGCC
AAACTGGGAGCCGTGAAAATGGAGCAGGAGTACATGCACTTTCGCTATCG
CGGTCACTTGGAGGTCAGCGATATGGTGGAACTGCGAGTCCTGGCGTGGT
CTATATTTGGACCAATGATGCTGATCATTACGGCCGTTCTGGAGGTATAC
TACCTCAAGCATTTCTTCGAAGTCAAGCGCGTGGTTTGAACTGCAAATTG
ATGAGCATTTCATCTGATAAAACAGTCGCGAAGTTTGTAAGATTTTCTTA
ATATTGTTTCAAAGGATTACAGGATTGCTAGATTACAACTACCAATAAAA
GGCTAAGAATGTTGGAAAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

IP11573.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9308-RA 825 CG9308-RA 1..825 1..825 4125 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:00:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17921225..17922047 1..823 4115 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:09:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22034844..22035668 1..825 4125 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22036043..22036867 1..825 4125 100 Plus
Blast to na_te.dros performed 2019-03-15 22:00:04
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 968..1021 761..708 108 66.7 Minus

IP11573.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:01:02 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17921225..17922047 1..823 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:49:51 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..612 78..689 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:47 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..612 78..689 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:04:52 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..612 78..689 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:29 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..612 78..689 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:08:54 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..612 78..689 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:04:01 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..823 1..823 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:47 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..823 1..823 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:04:52 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..823 1..823 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:29 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..823 1..823 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:54 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 1..823 1..823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:01:02 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22034844..22035666 1..823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:01:02 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22034844..22035666 1..823 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:01:02 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22034844..22035666 1..823 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:04:52 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17922349..17923171 1..823 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:40 Download gff for IP11573.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22036043..22036865 1..823 100   Plus

IP11573.pep Sequence

Translation from 77 to 688

> IP11573.pep
MLSAIVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGG
FKDVGVEIAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTP
KILMFQFHVARAIEFYMDSSKRVDDVIEQATVQSMINQLSAKLGAVKMEQ
EYMHFRYRGHLEVSDMVELRVLAWSIFGPMMLIITAVLEVYYLKHFFEVK
RVV*

IP11573.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13282-PA 207 GF13282-PA 17..207 13..203 772 69.6 Plus
Dana\GF19355-PA 208 GF19355-PA 20..208 13..203 414 40.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22154-PA 203 GG22154-PA 1..203 1..203 975 88.2 Plus
Dere\GG18710-PA 208 GG18710-PA 25..208 18..203 408 41.4 Plus
Dere\GG17343-PA 216 GG17343-PA 7..216 4..203 141 24.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20543-PA 203 GH20543-PA 1..203 1..203 649 54.7 Plus
Dgri\GH20668-PA 203 GH20668-PA 1..203 1..203 646 53.7 Plus
Dgri\GH25217-PA 203 GH25217-PA 1..203 1..203 644 54.2 Plus
Dgri\GH24063-PA 209 GH24063-PA 21..209 13..203 398 40.8 Plus
Dgri\GH23574-PA 61 GH23574-PA 1..61 143..203 206 59 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG9308-PA 203 CG9308-PA 1..203 1..203 1043 100 Plus
CHOp24-PB 208 CG3564-PB 15..208 8..203 409 40.8 Plus
CHOp24-PA 208 CG3564-PA 15..208 8..203 409 40.8 Plus
eca-PA 216 CG33104-PA 7..216 4..203 149 23.3 Plus
p24-1-PB 210 CG1967-PB 18..197 14..197 148 24.9 Plus
p24-1-PA 210 CG1967-PA 18..197 14..197 148 24.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:04:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18814-PA 202 GI18814-PA 7..202 8..203 634 56.6 Plus
Dmoj\GI15191-PA 208 GI15191-PA 20..208 13..203 407 40.3 Plus
Dmoj\GI15363-PA 235 GI15363-PA 31..226 4..201 154 23 Plus
Dmoj\GI10144-PA 216 GI10144-PA 7..216 4..203 140 24.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16969-PA 204 GL16969-PA 1..204 1..203 708 61.8 Plus
Dper\GL19967-PA 208 GL19967-PA 21..208 14..203 421 42.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21688-PA 204 GA21688-PA 1..204 1..203 708 61.8 Plus
Dpse\GA28584-PA 208 GA28584-PA 21..208 14..203 419 42.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15877-PA 203 GM15877-PA 1..203 1..203 1022 94.1 Plus
Dsec\GM12348-PA 208 GM12348-PA 25..208 18..203 411 41.9 Plus
Dsec\GM26230-PA 216 GM26230-PA 7..216 4..203 146 24.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15445-PA 203 GD15445-PA 1..203 1..203 1024 94.1 Plus
Dsim\GD16693-PA 208 GD16693-PA 25..208 18..203 411 41.9 Plus
Dsim\GD20772-PA 216 GD20772-PA 7..216 4..203 145 24.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:04:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21840-PA 203 GJ21840-PA 12..203 12..203 674 59.4 Plus
Dvir\GJ14798-PA 208 GJ14798-PA 21..208 14..203 414 42.1 Plus
Dvir\GJ23362-PA 216 GJ23362-PA 7..216 4..203 141 24.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14515-PA 299 GK14515-PA 111..299 13..203 404 41.4 Plus
Dwil\GK10123-PA 224 GK10123-PA 15..215 1..201 154 24.9 Plus
Dwil\GK12749-PA 216 GK12749-PA 7..216 4..203 141 24.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12235-PA 203 GE12235-PA 1..203 1..203 1001 90.6 Plus
Dyak\GE16348-PA 208 GE16348-PA 16..208 9..203 421 40.5 Plus
Dyak\GE24749-PA 216 GE24749-PA 7..216 4..203 140 24.1 Plus
Dyak\GE17592-PA 210 GE17592-PA 18..201 14..201 138 24.9 Plus

IP11573.hyp Sequence

Translation from 77 to 688

> IP11573.hyp
MLSAIVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGG
FKDVGVEIAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTP
KILMFQFHVARAIEFYMDSSKRVDDVIEQATVQSMINQLSAKLGAVKMEQ
EYMHFRYRGHLEVSDMVELRVLAWSIFGPMMLIITAVLEVYYLKHFFEVK
RVV*

IP11573.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:40:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9308-PA 203 CG9308-PA 1..203 1..203 1043 100 Plus
CHOp24-PB 208 CG3564-PB 15..208 8..203 409 40.8 Plus
CHOp24-PA 208 CG3564-PA 15..208 8..203 409 40.8 Plus
eca-PA 216 CG33104-PA 7..216 4..203 149 23.3 Plus
p24-1-PB 210 CG1967-PB 18..197 14..197 148 24.9 Plus