Clone IP11623 Report

Search the DGRC for IP11623

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:116
Well:23
Vector:pOT2
Associated Gene/TranscriptCG11629-RA
Protein status:IP11623.pep: gold
Preliminary Size:1392
Sequenced Size:1642

Clone Sequence Records

IP11623.complete Sequence

1642 bp assembled on 2011-09-01

GenBank Submission: BT128865.1

> IP11623.complete
ATTTTGAACTAAAACAGTTATTGCGAGAATGCTCAGCCTGAGGAATGGAA
TCTTCGCGGGCAATCTTCTCGGCAGCGGCTTTTGCCTTCAGCGATTTGCG
CCCTGTGCCTGTCGCTCTTCGCGAAAGCCTCCGGCGGGAAACTCCCCGAA
GAACCCATACAAGCAGCTGAACAATGACTCGGTGGAGGAGAAACGCCTGT
CGGTCCTGATGGAGCTGGGGTGTCGATGTCCGCAGAAGTCGCACAAGGAG
CGTTGGTTCCTCACCAACCAGCGCATTATTTTGGCCCTGGCCACGACCCT
GAATCGTCCGCCGGATTTGGTGTCAGACTTTTTGCACACACTGACCCTCC
AGAACTTTTCAGAGATCCTTCATCCCGCCGAGACGGAGACCTTAAGCCCC
TCTTGTAGAGTTCCCTTTGTGAACTGCGGTGCCTGTGAGAACTTTATGAG
AATTTTCGATACTCATGGGAATGTAAGGAGCCGCCTTAGCCAGGACTCAC
TGCAGCTACTAATGAGCGCCGTGCAAACTGTTTTGAAGCAATCTCCACCC
ACTGAGCTCCGTGCATTTGATGCAGGCGTTAGCGGCCTACGAGGGACACT
TAAAAGGGATTCCATAGCGCGTAGAGCTGGTATCGATCACGACTCAATCG
CTCGTCAAAACGGCAGGAGGCGATTAAGAAACTCGGAAGCCAGGGCCTCA
GAAAACAGAAGTCATCTCAACACCGGCCTGGAGCAACGCACAGCAGGAGA
TCCTGGATATGTTTTTGGATCCAGCCTTGAGTCCGCGGGCTTAGATGTCA
TGCACACGCCCGAAAAATGGGTTTTCACGGATTCTTTAGCTTTAGAGCGG
ACCAGGCGGCTCGCCAAATTGCTCATTCGCGTTAATGATAAGACTTATCT
GACGCGCGATACTGAGAAACTAATAACTGCCATCAAAGACCTCAAATTGG
ACAGCAATGTCACAAATCCAAAAAAACAGCCGCCACGGCATAGCATCAAG
GCCAATGTAAATTCCGATTCGTACTATGAAAGAGTCAAGGCTTCTGCTTC
GAAAGCCGTGCTCAAGAGCCACTCGGCACGCGGCTCGAAGAAAAGGAAGA
AGGCCAGCGATGTTGAGCCTGTTCCTAAGCGGACCACGAACCGAGTGTAT
TATGGCGATCCGCTCCCGGTGCTCCTGCACGAACCATTTAATCGTGAAAA
GCCGTGGACGTGGTTGCGCCGACATCCCCAGCAGATGCGCATGGATGAAA
AGGGTCAGGTGACACAGGGAAATATCCGTCGCTACCGGCGCCAAACCGTA
GAGCAGATGATGCAGAAAGCTAAGGAGCGATCATCGGTGATCACTGTGAT
CTCAACAGGTGACGAAAACGATTCCGTGAATGCGCAGCCCATGTTTGGTC
AGGAAACTTCCGGGAACTAAAACAAGGGCTCTCCCGACCGTGAATTTTTA
AAATTCCTTGGTAACGAAAATACTCGAAATTCGCATGGCAAATATTCTGT
ATGCATGTCAGTGATCCATGAACATTTATAATTCAATAAGGATACTCCAC
ATAACGTGCATAAATAAAAATGAAATACATTTTCCTATTGCAACTTGGAA
ATGTATTTAAATATGCTTAGATATAAAAAAAAAAAAAAAAAA

IP11623.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 21895220..21896843 1624..1 8060 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21896665..21898289 1625..1 8125 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21896665..21898289 1625..1 8125 100 Minus
Blast to na_te.dros performed on 2019-03-15 10:59:38 has no hits.

IP11623.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:00:53 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 21895220..21896843 1..1624 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-01 14:55:27 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 1..1392 29..1420 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:32:10 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 1..1392 29..1420 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:18:24 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 1..1392 29..1420 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-01 14:55:27 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 1..1624 1..1624 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:32:10 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 1..1624 1..1624 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:24 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
CG11629-RA 1..1624 1..1624 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:53 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21896666..21898289 1..1624 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:53 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21896666..21898289 1..1624 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:53 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21896666..21898289 1..1624 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:32:10 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21896666..21898289 1..1624 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:46 Download gff for IP11623.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21896666..21898289 1..1624 100   Minus

IP11623.hyp Sequence

Translation from 28 to 1419

> IP11623.hyp
MLSLRNGIFAGNLLGSGFCLQRFAPCACRSSRKPPAGNSPKNPYKQLNND
SVEEKRLSVLMELGCRCPQKSHKERWFLTNQRIILALATTLNRPPDLVSD
FLHTLTLQNFSEILHPAETETLSPSCRVPFVNCGACENFMRIFDTHGNVR
SRLSQDSLQLLMSAVQTVLKQSPPTELRAFDAGVSGLRGTLKRDSIARRA
GIDHDSIARQNGRRRLRNSEARASENRSHLNTGLEQRTAGDPGYVFGSSL
ESAGLDVMHTPEKWVFTDSLALERTRRLAKLLIRVNDKTYLTRDTEKLIT
AIKDLKLDSNVTNPKKQPPRHSIKANVNSDSYYERVKASASKAVLKSHSA
RGSKKRKKASDVEPVPKRTTNRVYYGDPLPVLLHEPFNREKPWTWLRRHP
QQMRMDEKGQVTQGNIRRYRRQTVEQMMQKAKERSSVITVISTGDENDSV
NAQPMFGQETSGN*

IP11623.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11629-PA 463 CG11629-PA 1..463 1..463 2402 100 Plus

IP11623.pep Sequence

Translation from 28 to 1419

> IP11623.pep
MLSLRNGIFAGNLLGSGFCLQRFAPCACRSSRKPPAGNSPKNPYKQLNND
SVEEKRLSVLMELGCRCPQKSHKERWFLTNQRIILALATTLNRPPDLVSD
FLHTLTLQNFSEILHPAETETLSPSCRVPFVNCGACENFMRIFDTHGNVR
SRLSQDSLQLLMSAVQTVLKQSPPTELRAFDAGVSGLRGTLKRDSIARRA
GIDHDSIARQNGRRRLRNSEARASENRSHLNTGLEQRTAGDPGYVFGSSL
ESAGLDVMHTPEKWVFTDSLALERTRRLAKLLIRVNDKTYLTRDTEKLIT
AIKDLKLDSNVTNPKKQPPRHSIKANVNSDSYYERVKASASKAVLKSHSA
RGSKKRKKASDVEPVPKRTTNRVYYGDPLPVLLHEPFNREKPWTWLRRHP
QQMRMDEKGQVTQGNIRRYRRQTVEQMMQKAKERSSVITVISTGDENDSV
NAQPMFGQETSGN*

IP11623.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:32:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23808-PA 473 GF23808-PA 1..473 1..458 711 37.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:32:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21474-PA 460 GG21474-PA 1..460 1..463 1977 79.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17538-PA 536 GH17538-PA 14..213 17..212 295 37.3 Plus
Dgri\GH11290-PA 536 GH11290-PA 14..213 17..212 294 36.9 Plus
Dgri\GH25194-PA 439 GH25194-PA 27..399 76..437 271 26.2 Plus
Dgri\GH17538-PA 536 GH17538-PA 320..500 278..445 229 33.3 Plus
Dgri\GH11290-PA 536 GH11290-PA 427..500 373..445 218 52.7 Plus
Dgri\GH25195-PA 461 GH25195-PA 338..419 376..458 192 43.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG11629-PA 463 CG11629-PA 1..463 1..463 2402 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24552-PA 411 GI24552-PA 9..181 7..171 220 33.9 Plus
Dmoj\GI24552-PA 411 GI24552-PA 290..399 344..451 194 36.6 Plus
Dmoj\GI17265-PA 794 GI17265-PA 662..751 368..458 192 41.8 Plus
Dmoj\GI17265-PA 794 GI17265-PA 31..123 74..168 174 35.8 Plus
Dmoj\GI17265-PA 794 GI17265-PA 408..461 372..425 163 51.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26121-PA 863 GL26121-PA 1..230 1..231 342 36.6 Plus
Dper\GL19645-PA 458 GL19645-PA 50..435 75..442 336 27 Plus
Dper\GL26121-PA 863 GL26121-PA 749..848 362..461 254 48.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:32:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11108-PA 856 GA11108-PA 1..230 1..231 346 37 Plus
Dpse\GA22425-PA 878 GA22425-PA 1..230 1..231 342 36.6 Plus
Dpse\GA16499-PA 460 GA16499-PA 50..437 75..442 332 27.6 Plus
Dpse\GA11108-PA 856 GA11108-PA 742..841 362..461 256 48.5 Plus
Dpse\GA22425-PA 878 GA22425-PA 764..863 362..461 255 48.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16125-PA 427 GM16125-PA 1..427 1..463 2111 87.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21626-PA 463 GD21626-PA 1..463 1..463 2333 93.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16327-PA 505 GJ16327-PA 79..492 56..447 374 32.9 Plus
Dvir\GJ22714-PA 380 GJ22714-PA 254..340 371..458 192 44.3 Plus
Dvir\GJ22714-PA 380 GJ22714-PA 56..126 348..411 164 47.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21120-PA 475 GK21120-PA 17..449 65..461 331 27.7 Plus
Dwil\GK21119-PA 1096 GK21119-PA 673..1061 76..457 317 27.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12976-PA 459 GE12976-PA 1..459 1..463 1939 79.9 Plus