Clone IP11710 Report

Search the DGRC for IP11710

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:117
Well:10
Vector:pOT2
Associated Gene/TranscriptCG10721-RA
Protein status:IP11710.pep: gold
Preliminary Size:1419
Sequenced Size:1516

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10721 2005-01-01 Successful iPCR screen
CG10721 2008-04-29 Release 5.5 accounting
CG10721 2008-08-15 Release 5.9 accounting
CG10721 2008-12-18 5.12 accounting

Clone Sequence Records

IP11710.complete Sequence

1516 bp (1516 high quality bases) assembled on 2005-02-26

GenBank Submission: BT022436

> IP11710.complete
TCTTTGTTTCATTACAGCTATTCCCCCTGAGGATGTCGCGGAAGTGCGAG
TTCCTGGTGGTCGGTGGAGGTATTGCTGGCGTCAGCTGCGCCGAGTCCCT
GGCCATCTACCGACCCAATGCCTCCATTCTACTGCTCACGGAGTCCAGCA
TCGTGAAGAGTGTGACCAATTTGGTGCCGGTGGCTCGCTATCTGCATAAG
TTCGACGTTCGGGAACAGGATGTCTCCGAAATGGGAGCTAGTTTTCAGAC
ACTAGTGGATCGCCTGGATCACATCAACAGCAGGGAGCATTGCATCCGCA
CTAAAGCGGGTCTGGAGATCAAGTATCGCTATTTGTGCCTCTGCACCGGT
GGAACACCCAAATTGTTCTCCGGCAAAGTAGTAAATCCCCTTGTCATTGG
CATTCGGGACACGGACTCTGTACAGCTGCTGCAGCGAAAGTTGGCGACAG
CTAAGGATGTCCTGATTTTGGGCAATGGCGGCATTGCCAGTGAGTTGGCC
TACGAGCTGAAGGATGTAAATGTCCACTGGGTGGTTAAAGATTCTCACAT
CTCGGCCACATTTGTGGATCCCGGAGCAGCCGAGTTCTTTCACATAGCCA
TGAATGAATGTAATGCGAAGGATTCCTCTCCGGTTGTGGCTATTAAGCGA
ATGCGGTACAGTGAAGTGCTGCCCAAGGAGCAGACTAACAACCATGGAGC
TGCATTGGGTCCGGACTGGCATCGCAGCGTCGACTTGAGTGGAGCACGTG
AAGGGGAAGAGAACCGCCTACCAAAGATCTATTACAAATCTCGCATAAGC
AGCGTTCAGGATCTCGCCGACGACGCAGGTGCTATAGTCAAGTTGGAGCA
TGAGGATGGGAGCTTTCAGCAGTTGACCTGTGACTTTATTGTTTCCGCAA
CGGGAGTTTGGCCGAATACCGACTACACGTGTGATTCGCCACTTCAATTT
TCCGACGATGGTGGCATATCGGTGGATGAAATGATGCGTACGAATCTGGT
GGATGTCTTTGCGGCCGGTGATGTGTGCACGGCCAACTGGCCAGCCGCAA
TGCACTGGTTCCAGATGCGCCTGTGGACTCAGGCTCGCCAAATGGGCTCC
ATGGCGGGCAGGAGTATGGCGGCTGCCAGTGAAGGTGAAAGCGTGTACCA
GGATTTCTGCTTCGAGCTCTTTGGCCACGTAACCAAACTTTTCGGATATC
CTGTTGTCCTGCTGGGACGCTTTAATGGTCAGGATTTGGGCAGGGACTAC
GAAATTCTGGTGCGCTGCACGAGAAATAAGGAATACATCAAGTTTGTGCT
TCAAAATGGCAGACTACGGGGAGCAATGCTAATCGGCAACACTGATCTCG
CAGAGACCTGCGAGAACCTCATCCTGAACGGCATTGATTTGGAGCCCTAT
GGCGATGATATTCTTAATCCCGACATTGACATTGAAGACTATTTTGATTA
GTTTATTATGCGCTAGCTTAGAGTATTAAAGACATTAAAAATAAAAAAAA
AAAAAAAAAAAAAAAA

IP11710.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10721.a 1566 CG10721.a 81..1566 1..1486 7430 100 Plus
Taf13-RA 741 Taf13-RA 601..741 1494..1354 705 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20090070..20091561 1..1492 7430 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:09:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:38:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20091661..20093154 1..1494 7470 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20091661..20093154 1..1494 7470 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:38:26 has no hits.

IP11710.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:39:21 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20090070..20091561 1..1492 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:49:57 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:36 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:34:32 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:18 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:11:22 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:03:30 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:36 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1492 1..1492 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:34:32 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 50..1541 1..1492 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:18 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 1..1419 33..1451 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:11:22 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
CG10721-RA 50..1541 1..1492 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:39:21 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20091661..20093152 1..1492 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:39:21 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20091661..20093152 1..1492 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:39:21 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20091661..20093152 1..1492 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:34:32 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20091661..20093152 1..1492 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:29 Download gff for IP11710.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20091661..20093152 1..1492 100   Plus

IP11710.hyp Sequence

Translation from 2 to 1450

> IP11710.hyp
FVSLQLFPLRMSRKCEFLVVGGGIAGVSCAESLAIYRPNASILLLTESSI
VKSVTNLVPVARYLHKFDVREQDVSEMGASFQTLVDRLDHINSREHCIRT
KAGLEIKYRYLCLCTGGTPKLFSGKVVNPLVIGIRDTDSVQLLQRKLATA
KDVLILGNGGIASELAYELKDVNVHWVVKDSHISATFVDPGAAEFFHIAM
NECNAKDSSPVVAIKRMRYSEVLPKEQTNNHGAALGPDWHRSVDLSGARE
GEENRLPKIYYKSRISSVQDLADDAGAIVKLEHEDGSFQQLTCDFIVSAT
GVWPNTDYTCDSPLQFSDDGGISVDEMMRTNLVDVFAAGDVCTANWPAAM
HWFQMRLWTQARQMGSMAGRSMAAASEGESVYQDFCFELFGHVTKLFGYP
VVLLGRFNGQDLGRDYEILVRCTRNKEYIKFVLQNGRLRGAMLIGNTDLA
ETCENLILNGIDLEPYGDDILNPDIDIEDYFD*

IP11710.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10721-PB 472 CG10721-PB 1..472 11..482 2472 100 Plus
CG10721-PA 472 CG10721-PA 1..472 11..482 2472 100 Plus

IP11710.pep Sequence

Translation from 32 to 1450

> IP11710.pep
MSRKCEFLVVGGGIAGVSCAESLAIYRPNASILLLTESSIVKSVTNLVPV
ARYLHKFDVREQDVSEMGASFQTLVDRLDHINSREHCIRTKAGLEIKYRY
LCLCTGGTPKLFSGKVVNPLVIGIRDTDSVQLLQRKLATAKDVLILGNGG
IASELAYELKDVNVHWVVKDSHISATFVDPGAAEFFHIAMNECNAKDSSP
VVAIKRMRYSEVLPKEQTNNHGAALGPDWHRSVDLSGAREGEENRLPKIY
YKSRISSVQDLADDAGAIVKLEHEDGSFQQLTCDFIVSATGVWPNTDYTC
DSPLQFSDDGGISVDEMMRTNLVDVFAAGDVCTANWPAAMHWFQMRLWTQ
ARQMGSMAGRSMAAASEGESVYQDFCFELFGHVTKLFGYPVVLLGRFNGQ
DLGRDYEILVRCTRNKEYIKFVLQNGRLRGAMLIGNTDLAETCENLILNG
IDLEPYGDDILNPDIDIEDYFD*

IP11710.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:49:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15453-PA 472 GF15453-PA 1..472 1..472 1965 78 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21221-PA 472 GG21221-PA 1..472 1..472 2302 89.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:49:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13237-PA 474 GH13237-PA 1..474 1..472 1775 71.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG10721-PB 472 CG10721-PB 1..472 1..472 2472 100 Plus
CG10721-PA 472 CG10721-PA 1..472 1..472 2472 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:49:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12484-PA 482 GI12484-PA 1..482 1..472 1785 69.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:49:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26669-PA 233 GL26669-PA 1..152 1..152 581 74.3 Plus
Dper\GL26669-PA 233 GL26669-PA 149..233 388..472 414 89.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:49:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10521-PA 472 GA10521-PA 1..472 1..472 1857 73.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:49:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17392-PA 315 GM17392-PA 1..312 1..312 1567 93.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12037-PA 283 GD12037-PA 1..283 190..472 1485 96.1 Plus
Dsim\GD24245-PA 466 GD24245-PA 1..152 1..152 755 94.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17886-PA 480 GJ17886-PA 1..480 1..472 1861 73.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:49:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18748-PA 484 GK18748-PA 1..484 1..472 1754 69.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:49:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13296-PA 472 GE13296-PA 1..472 1..472 2266 88.8 Plus