Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP11711.complete Sequence
1460 bp (1460 high quality bases) assembled on 2006-01-20
GenBank Submission: BT024312
> IP11711.complete
TCAGTTTGATACACAAATCACACAACAAAGTACAAAACCATTAATTTTTA
CCAAAAACTTTGTAAACAAATGTGTAAACAGCAGAATTGTCTTCATCAGA
AGAGCTGAGAAGTCAAAGCCATACAAAGAATCAACAAGAAATACAAATGA
ATCTAACGAAGTATAACTATCGAAAGTCTAAATATAATAAGTCTCGCATT
TTGAATTGCGATAAATTGAGACCAGAAAATCTGTACATGAATTGCGTCGA
TGTTAAAGGCAAACTTTATAGCCTATCGCTAAAAAAACATCATTCCAAAC
GAAATAAACGTCTTAAAATCAGATCTCTTCGATCCGAAAAGTATAAATTT
TCGAATATATTTAAACGCAAATCGCGAAGGCAAACAGCTAAGAATACTAC
TGATAAGGGGCTAATGGATTGTGACGTAAATATGGAACCTTCACGATATG
TGCCGCCCATTACAAATCCAATGGAAAGGATCAGCGAAGCCGGGACTAAA
AATCAACCGCATAAGTTGGAAACTGAGAAACCACGACGACTGCGCGGAAG
GCCGAAAAATATTGTGAAATCCTCTAGTCTTATTGCTTCAGACCATCGCA
AGGAAAATCCTATGGAAATAAACGATGAACAGAAGACTTTCACAAAGATA
TTAAAGAAAGTAAAGCTCAAGGTCGACGATTATTTGAAGGACATGAAGCT
GGCTGCTGCTTTTCGCAAGCAACAGAAAAAGTCGCAGCTACAAGTTAGTC
GCCGAAAATTAGGATTAGCTAAGCAGCGTCAACTAGGACGATCCAAAAAG
GATTCATCAAAAGTGAAGGAGAGACAAATGGATGAGCAATCAGTGGTTAT
ACAACAAGGTGCGGGGATTCGAGCTGCAAAACTTAAAAAGGACCAGCAGC
TATTGGAAAGAAACGTGCAGGAGGATAAAAAGAAACTGAATTCCAGAATT
TCAATGGATTGGGAAAAATTAGATAGTCCAGAAAAGGTTAAAGAACCACC
CATTGTATTACGACGCAGTGCCCGGATTCAAGCGGCAAAACTCAAGAAGG
AGACATTGGAAGCCAATATGAGAAAGAGCAAACAGGAGAAAGTCAGTACT
ACTACTAAAACGGTATCGAAACCTAGAATCACTCAACTAGCAGTGTGTCG
TTTATGTCCTAATTGCAATTCTATTAACTATCTTAGTCCGCCGTATTCGA
ATACATACTTTGAATGCGCCGATATAAACGGAAGGCTCTATAAACTAAAT
TAAATTTATTGATGATATGTAAATGGGCACTGATATTCGAACGAAACATA
AGAAAGTAGAAGCAACAACATATAATATAATACATATATATTATATTATA
CAAAATTTTCGTGAGCATGCAAATGCATCTTTAAGATTTTTATATGTGTC
CATATATTGGTTATTTATAATATAAATTCATAAGTAAAACAATAAAAAAA
AAAAAAAAAA
IP11711.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:21:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10734-RA | 1473 | CG10734-RA | 65..1473 | 1..1409 | 7045 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 12044589..12045924 | 1443..108 | 6680 | 100 | Minus |
chr2R | 21145070 | chr2R | 12046002..12046110 | 109..1 | 545 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:09:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:58:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16157264..16158602 | 1446..108 | 6695 | 100 | Minus |
2R | 25286936 | 2R | 16158680..16158788 | 109..1 | 545 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 16158463..16159801 | 1446..108 | 6695 | 100 | Minus |
2R | 25260384 | 2R | 16159879..16159987 | 109..1 | 545 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 01:58:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 5992..6084 | 1416..1326 | 127 | 64.2 | Minus |
IP11711.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:00:00 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 12044589..12045922 | 110..1443 | 97 | <- | Minus |
chr2R | 12046002..12046110 | 1..109 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:49:58 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 1..1107 | 147..1253 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:37:28 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 1..1107 | 147..1253 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:12:43 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 1..1107 | 147..1253 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:12:22 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 1..1107 | 147..1253 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:53:21 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 1..1107 | 147..1253 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:09:13 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 7..1305 | 1..1299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:37:27 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 7..1449 | 1..1443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:12:43 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 7..1449 | 1..1443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:12:22 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 7..1305 | 1..1299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:53:21 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10734-RA | 7..1449 | 1..1443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:00 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16158680..16158788 | 1..109 | 100 | | Minus |
2R | 16157267..16158600 | 110..1443 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:00 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16158680..16158788 | 1..109 | 100 | | Minus |
2R | 16157267..16158600 | 110..1443 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:00 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16158680..16158788 | 1..109 | 100 | | Minus |
2R | 16157267..16158600 | 110..1443 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:12:43 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12044772..12046105 | 110..1443 | 100 | <- | Minus |
arm_2R | 12046185..12046293 | 1..109 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:39 Download gff for
IP11711.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16158466..16159799 | 110..1443 | 100 | <- | Minus |
2R | 16159879..16159987 | 1..109 | 100 | | Minus |
IP11711.pep Sequence
Translation from 146 to 1252
> IP11711.pep
MNLTKYNYRKSKYNKSRILNCDKLRPENLYMNCVDVKGKLYSLSLKKHHS
KRNKRLKIRSLRSEKYKFSNIFKRKSRRQTAKNTTDKGLMDCDVNMEPSR
YVPPITNPMERISEAGTKNQPHKLETEKPRRLRGRPKNIVKSSSLIASDH
RKENPMEINDEQKTFTKILKKVKLKVDDYLKDMKLAAAFRKQQKKSQLQV
SRRKLGLAKQRQLGRSKKDSSKVKERQMDEQSVVIQQGAGIRAAKLKKDQ
QLLERNVQEDKKKLNSRISMDWEKLDSPEKVKEPPIVLRRSARIQAAKLK
KETLEANMRKSKQEKVSTTTKTVSKPRITQLAVCRLCPNCNSINYLSPPY
SNTYFECADINGRLYKLN*
IP11711.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:20:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22299-PA | 264 | GG22299-PA | 5..213 | 114..310 | 455 | 54.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10734-PA | 368 | CG10734-PA | 1..368 | 1..368 | 1882 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20088-PA | 374 | GM20088-PA | 1..374 | 1..368 | 1127 | 65.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25565-PA | 370 | GD25565-PA | 1..370 | 1..368 | 1033 | 61.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:20:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14095-PA | 412 | GE14095-PA | 1..382 | 1..368 | 641 | 47 | Plus |
IP11711.hyp Sequence
Translation from 146 to 1252
> IP11711.hyp
MNLTKYNYRKSKYNKSRILNCDKLRPENLYMNCVDVKGKLYSLSLKKHHS
KRNKRLKIRSLRSEKYKFSNIFKRKSRRQTAKNTTDKGLMDCDVNMEPSR
YVPPITNPMERISEAGTKNQPHKLETEKPRRLRGRPKNIVKSSSLIASDH
RKENPMEINDEQKTFTKILKKVKLKVDDYLKDMKLAAAFRKQQKKSQLQV
SRRKLGLAKQRQLGRSKKDSSKVKERQMDEQSVVIQQGAGIRAAKLKKDQ
QLLERNVQEDKKKLNSRISMDWEKLDSPEKVKEPPIVLRRSARIQAAKLK
KETLEANMRKSKQEKVSTTTKTVSKPRITQLAVCRLCPNCNSINYLSPPY
SNTYFECADINGRLYKLN*
IP11711.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:40:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10734-PA | 368 | CG10734-PA | 1..368 | 1..368 | 1882 | 100 | Plus |