Clone IP11711 Report

Search the DGRC for IP11711

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:117
Well:11
Vector:pOT2
Associated Gene/TranscriptCG10734-RA
Protein status:IP11711.pep: gold
Preliminary Size:1305
Sequenced Size:1460

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10734 2005-01-01 Successful iPCR screen
CG10734 2008-04-29 Release 5.5 accounting
CG10734 2008-08-15 Release 5.9 accounting
CG10734 2008-12-18 5.12 accounting

Clone Sequence Records

IP11711.complete Sequence

1460 bp (1460 high quality bases) assembled on 2006-01-20

GenBank Submission: BT024312

> IP11711.complete
TCAGTTTGATACACAAATCACACAACAAAGTACAAAACCATTAATTTTTA
CCAAAAACTTTGTAAACAAATGTGTAAACAGCAGAATTGTCTTCATCAGA
AGAGCTGAGAAGTCAAAGCCATACAAAGAATCAACAAGAAATACAAATGA
ATCTAACGAAGTATAACTATCGAAAGTCTAAATATAATAAGTCTCGCATT
TTGAATTGCGATAAATTGAGACCAGAAAATCTGTACATGAATTGCGTCGA
TGTTAAAGGCAAACTTTATAGCCTATCGCTAAAAAAACATCATTCCAAAC
GAAATAAACGTCTTAAAATCAGATCTCTTCGATCCGAAAAGTATAAATTT
TCGAATATATTTAAACGCAAATCGCGAAGGCAAACAGCTAAGAATACTAC
TGATAAGGGGCTAATGGATTGTGACGTAAATATGGAACCTTCACGATATG
TGCCGCCCATTACAAATCCAATGGAAAGGATCAGCGAAGCCGGGACTAAA
AATCAACCGCATAAGTTGGAAACTGAGAAACCACGACGACTGCGCGGAAG
GCCGAAAAATATTGTGAAATCCTCTAGTCTTATTGCTTCAGACCATCGCA
AGGAAAATCCTATGGAAATAAACGATGAACAGAAGACTTTCACAAAGATA
TTAAAGAAAGTAAAGCTCAAGGTCGACGATTATTTGAAGGACATGAAGCT
GGCTGCTGCTTTTCGCAAGCAACAGAAAAAGTCGCAGCTACAAGTTAGTC
GCCGAAAATTAGGATTAGCTAAGCAGCGTCAACTAGGACGATCCAAAAAG
GATTCATCAAAAGTGAAGGAGAGACAAATGGATGAGCAATCAGTGGTTAT
ACAACAAGGTGCGGGGATTCGAGCTGCAAAACTTAAAAAGGACCAGCAGC
TATTGGAAAGAAACGTGCAGGAGGATAAAAAGAAACTGAATTCCAGAATT
TCAATGGATTGGGAAAAATTAGATAGTCCAGAAAAGGTTAAAGAACCACC
CATTGTATTACGACGCAGTGCCCGGATTCAAGCGGCAAAACTCAAGAAGG
AGACATTGGAAGCCAATATGAGAAAGAGCAAACAGGAGAAAGTCAGTACT
ACTACTAAAACGGTATCGAAACCTAGAATCACTCAACTAGCAGTGTGTCG
TTTATGTCCTAATTGCAATTCTATTAACTATCTTAGTCCGCCGTATTCGA
ATACATACTTTGAATGCGCCGATATAAACGGAAGGCTCTATAAACTAAAT
TAAATTTATTGATGATATGTAAATGGGCACTGATATTCGAACGAAACATA
AGAAAGTAGAAGCAACAACATATAATATAATACATATATATTATATTATA
CAAAATTTTCGTGAGCATGCAAATGCATCTTTAAGATTTTTATATGTGTC
CATATATTGGTTATTTATAATATAAATTCATAAGTAAAACAATAAAAAAA
AAAAAAAAAA

IP11711.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10734-RA 1473 CG10734-RA 65..1473 1..1409 7045 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12044589..12045924 1443..108 6680 100 Minus
chr2R 21145070 chr2R 12046002..12046110 109..1 545 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:09:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16157264..16158602 1446..108 6695 100 Minus
2R 25286936 2R 16158680..16158788 109..1 545 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16158463..16159801 1446..108 6695 100 Minus
2R 25260384 2R 16159879..16159987 109..1 545 100 Minus
Blast to na_te.dros performed 2019-03-16 01:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 5992..6084 1416..1326 127 64.2 Minus

IP11711.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:00:00 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12044589..12045922 110..1443 97 <- Minus
chr2R 12046002..12046110 1..109 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:49:58 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 1..1107 147..1253 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:37:28 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 1..1107 147..1253 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:12:43 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 1..1107 147..1253 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:12:22 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 1..1107 147..1253 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:53:21 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 1..1107 147..1253 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:09:13 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 7..1305 1..1299 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:37:27 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 7..1449 1..1443 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:12:43 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 7..1449 1..1443 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:12:22 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 7..1305 1..1299 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:53:21 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
CG10734-RA 7..1449 1..1443 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:00 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16158680..16158788 1..109 100   Minus
2R 16157267..16158600 110..1443 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:00 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16158680..16158788 1..109 100   Minus
2R 16157267..16158600 110..1443 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:00 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16158680..16158788 1..109 100   Minus
2R 16157267..16158600 110..1443 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:12:43 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12044772..12046105 110..1443 100 <- Minus
arm_2R 12046185..12046293 1..109 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:39 Download gff for IP11711.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16158466..16159799 110..1443 100 <- Minus
2R 16159879..16159987 1..109 100   Minus

IP11711.pep Sequence

Translation from 146 to 1252

> IP11711.pep
MNLTKYNYRKSKYNKSRILNCDKLRPENLYMNCVDVKGKLYSLSLKKHHS
KRNKRLKIRSLRSEKYKFSNIFKRKSRRQTAKNTTDKGLMDCDVNMEPSR
YVPPITNPMERISEAGTKNQPHKLETEKPRRLRGRPKNIVKSSSLIASDH
RKENPMEINDEQKTFTKILKKVKLKVDDYLKDMKLAAAFRKQQKKSQLQV
SRRKLGLAKQRQLGRSKKDSSKVKERQMDEQSVVIQQGAGIRAAKLKKDQ
QLLERNVQEDKKKLNSRISMDWEKLDSPEKVKEPPIVLRRSARIQAAKLK
KETLEANMRKSKQEKVSTTTKTVSKPRITQLAVCRLCPNCNSINYLSPPY
SNTYFECADINGRLYKLN*

IP11711.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:20:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22299-PA 264 GG22299-PA 5..213 114..310 455 54.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10734-PA 368 CG10734-PA 1..368 1..368 1882 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:20:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20088-PA 374 GM20088-PA 1..374 1..368 1127 65.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:20:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25565-PA 370 GD25565-PA 1..370 1..368 1033 61.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:20:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14095-PA 412 GE14095-PA 1..382 1..368 641 47 Plus

IP11711.hyp Sequence

Translation from 146 to 1252

> IP11711.hyp
MNLTKYNYRKSKYNKSRILNCDKLRPENLYMNCVDVKGKLYSLSLKKHHS
KRNKRLKIRSLRSEKYKFSNIFKRKSRRQTAKNTTDKGLMDCDVNMEPSR
YVPPITNPMERISEAGTKNQPHKLETEKPRRLRGRPKNIVKSSSLIASDH
RKENPMEINDEQKTFTKILKKVKLKVDDYLKDMKLAAAFRKQQKKSQLQV
SRRKLGLAKQRQLGRSKKDSSKVKERQMDEQSVVIQQGAGIRAAKLKKDQ
QLLERNVQEDKKKLNSRISMDWEKLDSPEKVKEPPIVLRRSARIQAAKLK
KETLEANMRKSKQEKVSTTTKTVSKPRITQLAVCRLCPNCNSINYLSPPY
SNTYFECADINGRLYKLN*

IP11711.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10734-PA 368 CG10734-PA 1..368 1..368 1882 100 Plus