Clone IP11733 Report

Search the DGRC for IP11733

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:117
Well:33
Vector:pOT2
Associated Gene/TranscriptCG12681-RA
Protein status:IP11733.pep: gold
Preliminary Size:1464
Sequenced Size:1595

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12681 2005-01-01 Successful iPCR screen
CG12681 2008-04-29 Release 5.5 accounting
CG12681 2008-08-15 Release 5.9 accounting
CG12681 2008-12-18 5.12 accounting

Clone Sequence Records

IP11733.complete Sequence

1595 bp (1595 high quality bases) assembled on 2005-05-04

GenBank Submission: BT022456

> IP11733.complete
AAAACATCAGCACCGAACGTCTATACATTTTCCAAGTTTTAAATATACAT
TTTTTTTTTTGTATATATATACACTGCATTAAGTACGGAAATTTGGCGCT
TAAAATGGTTGTTCCGAGGATTAAGAAAAGAAGTCACAGTAGGAAAATCG
AGGCGACGCCAATGGATGTGGAGGAAAAAGATAATAATCGTGATCGTAAA
CACATTTTGAATCATCTATCGCGGGCACCCGGAAAATGTATTTTGAGTAA
CTGCAATCAATTGGTTTTCCCATCGAATATGCTGGTACACATGCTCCGCA
AGCACAACAATAGTCCGAATACCAACTTGGCGATCATCTATGACAATCAA
CGATTGCGTAAAACCTTCAATCTAAATAGTTTGAAATACGACGAACCGCA
GGTGTTGAATATACTCCTGTATGCTGGCACCGAGGGTAAGCCGCACACTC
GACCAGCTCGCCGGTACTTGAGTTATCCCAATTGCGGTCTACCTCATAGT
TTCGGTCGGTACGAGCATCATTTAATGATGAATCTAATGATTTGCAAGAC
CTCTTGGTTCTCCATGCTGCCGGACAGAATATGCGGCGAGAAGCTGGAGA
AAATGCATGGTACGCCGGAGAACACCATATATGTTATATGGCTGATGGGC
CCGGAGACCTCAAGTCGTATGTTTTATACGCTGACTGCATACGATCGTTA
CTATATACAATCGCGCAGTGTTATTCGGAAAACAAGGAACTTTTTTCTAT
CGCAGCAACCGAAGGACTTTCTCAATCACGAGAATGATTACCTGATGCTT
CGCCATGAGGAGGCAATGGATTTGATGAACGGCGAGGGTGACGAATTGAA
TCAGACATCGTACATTAAGTTGGAACTATTTTTGCACGAGGAACCTAAAC
TGGTTTCGTTTCCCACACATTTGTTTCCGACTCCAATGATGTCAGATACA
ATAAGAATATTCCCACTATCATTTAAGGCGATTAATGTTCTGCCCCCTAA
AATGATGACGAAACAGAACTGGAAACGGGCCATAAGGATGTCCAGGAAAG
GACCTGTGGCAGCGACTAAAACCGCGAAAGAATCAAATGACACCTCAGAC
GATCAAGAATACTCCTTTGATAGTAAAGTAAAAATTGAGCTCCTTAAATA
TCTACACTCAGTGAGGATTCCTAAGGCCAAGAGAACGCAAAAACAAGTCC
AGAACGAAGATCAAGCAAAGCCTCTCGAGATGGATCCCGTACTCTTGGAA
GTACCAATCAAGAATAGAGTATTGAAAACTTTTAAGAATGCCATGGATAA
TTCGGTCAAGGACGCAGTGAGAAAGGTGACCGATGAGACGTTAATCGCTA
ACCTAGATATAAAGTCTGAATTGGAACTAGAACTAGAAATAAAACCGCGA
AACCGACCAGCTGAAGCGAAAACGGAAGCTAAAAATGAAACTGAAGCGCC
ACAGTAGAGAATTTTTTATTGAAAAAATCCTAAGGTACTTTTTCATTTTT
CTTACCAAAAAAAATTTCACGCAACAAATTGTAAATCTTTCAGTACAATA
AATGACCCGAATTCAACTTGCATACCAAAAAAAAAAAAAAAAAAA

IP11733.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:23:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG12681-RA 1464 CG12681-RA 8..1464 1..1457 7285 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:43:15
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 4768430..4770005 1..1576 7880 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:10:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4875688..4877266 1..1579 7895 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 4883786..4885364 1..1579 7895 100 Plus
Blast to na_te.dros performed 2019-03-16 07:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1542..1669 1352..1477 122 56.2 Plus

IP11733.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:44:08 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 4768430..4770005 1..1576 97   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:50:06 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 1..1353 105..1457 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:41:04 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 1..1353 105..1457 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:46:44 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 1..1353 105..1457 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:16:41 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 1..1353 105..1457 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:37:20 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 1..1353 105..1457 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:14:00 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 8..1464 1..1457 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:41:04 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 19..1594 1..1576 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:44 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 19..1594 1..1576 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:44 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 8..1464 1..1457 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:37:20 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
CG12681-RA 19..1594 1..1576 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:08 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
X 4875688..4877263 1..1576 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:08 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
X 4875688..4877263 1..1576 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:44:08 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
X 4875688..4877263 1..1576 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:44 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4769721..4771296 1..1576 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:03:20 Download gff for IP11733.complete
Subject Subject Range Query Range Percent Splice Strand
X 4883786..4885361 1..1576 100   Plus

IP11733.hyp Sequence

Translation from 2 to 1456

> IP11733.hyp
NISTERLYIFQVLNIHFFFCIYIHCIKYGNLALKMVVPRIKKRSHSRKIE
ATPMDVEEKDNNRDRKHILNHLSRAPGKCILSNCNQLVFPSNMLVHMLRK
HNNSPNTNLAIIYDNQRLRKTFNLNSLKYDEPQVLNILLYAGTEGKPHTR
PARRYLSYPNCGLPHSFGRYEHHLMMNLMICKTSWFSMLPDRICGEKLEK
MHGTPENTIYVIWLMGPETSSRMFYTLTAYDRYYIQSRSVIRKTRNFFLS
QQPKDFLNHENDYLMLRHEEAMDLMNGEGDELNQTSYIKLELFLHEEPKL
VSFPTHLFPTPMMSDTIRIFPLSFKAINVLPPKMMTKQNWKRAIRMSRKG
PVAATKTAKESNDTSDDQEYSFDSKVKIELLKYLHSVRIPKAKRTQKQVQ
NEDQAKPLEMDPVLLEVPIKNRVLKTFKNAMDNSVKDAVRKVTDETLIAN
LDIKSELELELEIKPRNRPAEAKTEAKNETEAPQ*

IP11733.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12681-PA 450 CG12681-PA 1..450 35..484 2362 100 Plus
CG11227-PA 753 CG11227-PA 486..734 37..276 230 23.7 Plus
CG11227-PB 764 CG11227-PB 497..745 37..276 230 23.7 Plus
CG12682-PA 237 CG12682-PA 17..225 76..283 151 26.6 Plus

IP11733.pep Sequence

Translation from 2 to 1456

> IP11733.pep
NISTERLYIFQVLNIHFFFCIYIHCIKYGNLALKMVVPRIKKRSHSRKIE
ATPMDVEEKDNNRDRKHILNHLSRAPGKCILSNCNQLVFPSNMLVHMLRK
HNNSPNTNLAIIYDNQRLRKTFNLNSLKYDEPQVLNILLYAGTEGKPHTR
PARRYLSYPNCGLPHSFGRYEHHLMMNLMICKTSWFSMLPDRICGEKLEK
MHGTPENTIYVIWLMGPETSSRMFYTLTAYDRYYIQSRSVIRKTRNFFLS
QQPKDFLNHENDYLMLRHEEAMDLMNGEGDELNQTSYIKLELFLHEEPKL
VSFPTHLFPTPMMSDTIRIFPLSFKAINVLPPKMMTKQNWKRAIRMSRKG
PVAATKTAKESNDTSDDQEYSFDSKVKIELLKYLHSVRIPKAKRTQKQVQ
NEDQAKPLEMDPVLLEVPIKNRVLKTFKNAMDNSVKDAVRKVTDETLIAN
LDIKSELELELEIKPRNRPAEAKTEAKNETEAPQ*

IP11733.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20347-PA 819 GF20347-PA 40..299 56..303 615 46.4 Plus
Dana\GF20345-PA 274 GF20345-PA 1..217 54..246 155 26.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18731-PA 534 GG18731-PA 1..489 35..484 1208 49.7 Plus
Dere\GG17568-PA 682 GG17568-PA 467..674 88..307 185 24.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23863-PA 309 GH23863-PA 6..302 39..366 360 29 Plus
Dgri\GH23305-PA 241 GH23305-PA 1..206 93..298 349 36.2 Plus
Dgri\GH17077-PA 303 GH17077-PA 10..295 57..365 345 29.7 Plus
Dgri\GH22078-PA 331 GH22078-PA 102..316 72..282 171 24.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
boil-PA 450 CG12681-PA 1..450 35..484 2362 100 Plus
CG11227-PA 753 CG11227-PA 486..734 37..276 230 23.7 Plus
CG11227-PB 764 CG11227-PB 497..745 37..276 230 23.7 Plus
CG12682-PA 237 CG12682-PA 17..225 76..283 151 26.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11677-PA 344 GI11677-PA 30..271 57..298 449 37.6 Plus
Dmoj\GI11673-PA 292 GI11673-PA 2..200 76..276 378 40.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13102-PA 346 GL13102-PA 7..205 105..296 214 31 Plus
Dper\GL16760-PA 342 GL16760-PA 121..340 75..298 151 27.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23060-PA 776 GA23060-PA 26..260 69..296 356 33.1 Plus
Dpse\GA11911-PB 346 GA11911-PB 125..344 75..298 151 27 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12369-PA 536 GM12369-PA 1..370 35..414 1343 68.9 Plus
Dsec\GM22651-PA 635 GM22651-PA 338..606 10..266 195 23.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16709-PA 533 GD16709-PA 1..368 35..414 1361 70.3 Plus
Dsim\GD15521-PA 205 GD15521-PA 8..176 92..266 181 25.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11349-PA 343 GJ11349-PA 25..274 57..299 443 40.1 Plus
Dvir\GJ11348-PA 319 GJ11348-PA 24..256 69..298 439 35.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25313-PA 363 GK25313-PA 46..294 57..304 520 38.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16368-PA 634 GE16368-PA 1..361 35..401 939 53.5 Plus
Dyak\GE15327-PA 470 GE15327-PA 257..469 88..310 178 23.1 Plus