Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP11783.complete Sequence
1380 bp (1380 high quality bases) assembled on 2005-05-04
GenBank Submission: BT022480
> IP11783.complete
CCAACACGCCATTGGACTTGCCTGGACTTGATTCGTGTCCTTCGCCAAAA
AGAGCAAGGATTAGTGAATCCCAGCTGGGGGAAGCCATGCCCAGGGAACC
AGCTAGTGTCTATGGGGAAAAGGCAGAGAAGGTGAAAACGTACCAACCTG
GCACAGTGGTAGTCCAGCCACCCGAACGACGGCCTCCCGAGCCGGAACAC
GATCGCCTGATGTTCATTCCCGACCTAGACCAGGACATTACCCATCGGGA
TGTGTTCACCTATTTCAGCAAATTTGGGGATTTGGAGAGGGTCAGCGTGA
GGAATGGCATGAGTAACTTTAACTACGCCATGGTGCGGTTTAGTCGCACT
TCATACATGGAGCATGCCATCGAATCGAATCCACATCTGATCAAGGGATA
CCGATTGAACTGTCGCAAGGCGAAAGAAAAAAGTACAAATAAGGGAAGTC
AGCAAAACTCTGGGACCATAAAAAAACCAAAGGCAACGATAACGCAGCCA
CACAAAGCTCCTGTAAGGCAGGCAGAGAAAAACGACGCCAAACAAAGTGG
TCACAAATCTTTAGAGAAGAATTCGAAGCCACCAATTAACAGATCATTGC
TTCTTCAAAAACTGGTAGAACCCACGTCCTATAGTCCATTTACCGCCGTA
AAATCTGATCGAAACTATGCCTATGCATTAACCAATGACATTGGAATCTC
CCGCTGGAGCTTTAACTTGTTGAAATTCGAACCCAGTTCAGACGAGGTGA
GGGCCCTGGAAAAGGGTCTTTCCAGTTCGGCAAAGCTCCTACTGAGCATA
CGGAAGAAACTGGCTGCCGTGCCCCACAAGTCTGTCGAGCCACCAGCTCC
AAAGTGGCCACAAACTCCTAGTGATAAAGCCGTTCCAAAAGTTACTCTTA
AGATAGCTCCACCAATTCCTGCCTCTAGTCCAGTGCTCCCATCCCTGCCA
CAAACTCCTAGTGATAAAGCCGTTCCAAAAGTTATTTTTAAAATACCTCC
ACCACCTCCTGCCTCTAGTCCAGTGCTCCCATCCTTGCCGAGCCTTCTGC
CGATCACTCCCCTAGTGCCTAAGCCCAAACCTGTTCTTCGAAAAGTTTCC
AAGTCAGATCTCCGCTACGCCGTTCTAGCCAGTTTGGGTCAGAACTATGT
CCATCACTGCTACACTAATGTGGCAGCTTATCGGCGGACCAAGAACTACG
TCGACCTACAGCTCAGCGAGATGAAAGACCGACCCAGCATTTCGATGTTT
GCGGATCAGATGTACGCACAGAAAGAGTAGGAATTACCAAATGCAAATCA
TATCTATCATATCATATATCATTCAATATAACAATAGTTAAGCAATATTT
CCCAAGAAAAAAAAAAAAAAAAAAAAAAAA
IP11783.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:23:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14506.a | 2484 | CG14506.a | 547..1781 | 125..1359 | 6175 | 100 | Plus |
CG14506.c | 3929 | CG14506.c | 547..1781 | 125..1359 | 6175 | 100 | Plus |
CG14506.e | 3703 | CG14506.e | 547..1781 | 125..1359 | 6175 | 100 | Plus |
CG14506.a | 2484 | CG14506.a | 402..527 | 1..126 | 630 | 100 | Plus |
CG14506.c | 3929 | CG14506.c | 402..527 | 1..126 | 630 | 100 | Plus |
CG14506.e | 3703 | CG14506.e | 402..527 | 1..126 | 630 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:34:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 25118513..25119744 | 1356..125 | 5830 | 98.2 | Minus |
chr3R | 27901430 | chr3R | 25119825..25119950 | 126..1 | 615 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 25118830..25118920 | 949..859 | 365 | 93.4 | Minus |
chr3R | 27901430 | chr3R | 25118925..25119009 | 1034..950 | 305 | 90.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:10:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:34:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29295740..29296974 | 1359..125 | 6175 | 100 | Minus |
3R | 32079331 | 3R | 29297055..29297180 | 126..1 | 630 | 100 | Minus |
3R | 32079331 | 3R | 29296060..29296152 | 949..857 | 360 | 92.5 | Minus |
3R | 32079331 | 3R | 29296150..29296242 | 1039..947 | 360 | 92.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 29036571..29037805 | 1359..125 | 6175 | 100 | Minus |
3R | 31820162 | 3R | 29037886..29038011 | 126..1 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 12:34:03 has no hits.
IP11783.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:34:54 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 25118513..25119742 | 127..1356 | 98 | <- | Minus |
chr3R | 25119825..25119950 | 1..126 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:50:17 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RA | 50..1329 | 1..1280 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:40:52 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RA | 50..1329 | 1..1280 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:45:52 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RC | 1..1194 | 87..1280 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:16:31 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RA | 50..1329 | 1..1280 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:03:57 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RC | 1..1194 | 87..1280 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:13:50 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RA | 50..1405 | 1..1356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:40:52 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RA | 50..1405 | 1..1356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:45:52 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RC | 1..1356 | 1..1356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:32 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RA | 50..1405 | 1..1356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:03:57 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14506-RC | 1..1356 | 1..1356 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:34:54 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29295743..29296972 | 127..1356 | 100 | <- | Minus |
3R | 29297055..29297180 | 1..126 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:34:54 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29295743..29296972 | 127..1356 | 100 | <- | Minus |
3R | 29297055..29297180 | 1..126 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:34:54 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29295743..29296972 | 127..1356 | 100 | <- | Minus |
3R | 29297055..29297180 | 1..126 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:45:52 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25121465..25122694 | 127..1356 | 100 | <- | Minus |
arm_3R | 25122777..25122902 | 1..126 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:03:13 Download gff for
IP11783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29036574..29037803 | 127..1356 | 100 | <- | Minus |
3R | 29037886..29038011 | 1..126 | 100 | | Minus |
IP11783.pep Sequence
Translation from 2 to 1279
> IP11783.pep
NTPLDLPGLDSCPSPKRARISESQLGEAMPREPASVYGEKAEKVKTYQPG
TVVVQPPERRPPEPEHDRLMFIPDLDQDITHRDVFTYFSKFGDLERVSVR
NGMSNFNYAMVRFSRTSYMEHAIESNPHLIKGYRLNCRKAKEKSTNKGSQ
QNSGTIKKPKATITQPHKAPVRQAEKNDAKQSGHKSLEKNSKPPINRSLL
LQKLVEPTSYSPFTAVKSDRNYAYALTNDIGISRWSFNLLKFEPSSDEVR
ALEKGLSSSAKLLLSIRKKLAAVPHKSVEPPAPKWPQTPSDKAVPKVTLK
IAPPIPASSPVLPSLPQTPSDKAVPKVIFKIPPPPPASSPVLPSLPSLLP
ITPLVPKPKPVLRKVSKSDLRYAVLASLGQNYVHHCYTNVAAYRRTKNYV
DLQLSEMKDRPSISMFADQMYAQKE*
IP11783.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:28:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF22477-PA | 1884 | GF22477-PA | 135..224 | 68..157 | 206 | 41.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:28:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12020-PA | 391 | GG12020-PA | 8..391 | 1..425 | 1011 | 55.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:28:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH14154-PA | 227 | GH14154-PA | 6..78 | 68..140 | 154 | 35.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14506-PC | 397 | CG14506-PC | 1..397 | 29..425 | 2064 | 100 | Plus |
CG14506-PB | 404 | CG14506-PB | 1..404 | 29..425 | 2046 | 98.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:28:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12246-PA | 431 | GM12246-PA | 18..431 | 1..425 | 1626 | 81 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:28:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17831-PA | 430 | GD17831-PA | 18..430 | 1..425 | 1636 | 81.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:28:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10456-PA | 424 | GE10456-PA | 18..424 | 1..424 | 1169 | 60.1 | Plus |
IP11783.hyp Sequence
Translation from 2 to 1279
> IP11783.hyp
NTPLDLPGLDSCPSPKRARISESQLGEAMPREPASVYGEKAEKVKTYQPG
TVVVQPPERRPPEPEHDRLMFIPDLDQDITHRDVFTYFSKFGDLERVSVR
NGMSNFNYAMVRFSRTSYMEHAIESNPHLIKGYRLNCRKAKEKSTNKGSQ
QNSGTIKKPKATITQPHKAPVRQAEKNDAKQSGHKSLEKNSKPPINRSLL
LQKLVEPTSYSPFTAVKSDRNYAYALTNDIGISRWSFNLLKFEPSSDEVR
ALEKGLSSSAKLLLSIRKKLAAVPHKSVEPPAPKWPQTPSDKAVPKVTLK
IAPPIPASSPVLPSLPQTPSDKAVPKVIFKIPPPPPASSPVLPSLPSLLP
ITPLVPKPKPVLRKVSKSDLRYAVLASLGQNYVHHCYTNVAAYRRTKNYV
DLQLSEMKDRPSISMFADQMYAQKE*
IP11783.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:42:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14506-PC | 397 | CG14506-PC | 1..397 | 29..425 | 2064 | 100 | Plus |
CG14506-PB | 404 | CG14506-PB | 1..404 | 29..425 | 2046 | 98.3 | Plus |