Clone IP11792 Report

Search the DGRC for IP11792

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:117
Well:92
Vector:pOT2
Associated Gene/TranscriptCG43317-RA
Protein status:IP11792.pep: gold
Preliminary Size:1263
Sequenced Size:1123

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14876 2005-01-01 Successful iPCR screen
CG14876 2008-04-29 Release 5.5 accounting
CG14876 2008-08-15 Release 5.9 accounting
CG14876 2008-12-18 5.12 accounting

Clone Sequence Records

IP11792.complete Sequence

1123 bp (1123 high quality bases) assembled on 2005-05-04

GenBank Submission: BT022492

> IP11792.complete
TGGATATAGGCTAGCTAGTTAGAATCAGTGTTGAGTGTGGCAGGCAGGTT
AGTTGTTGTTGGCCTTACTTTCCAGTCGTCGTCGATCGTGCAATACTAGA
GTTTCGTTGAGTTTGTTGAAGTTGTCCAGGCTTTAAGTGTAGGCATATCC
GCATATATATATACATATATATATACGATCTTGACTCTGCTCTCATATTC
CCTATAGATCTTTGATATATGCATACTAATATACATAACATACTTAACGT
GTATTTTACCTCGTGCCGAATTCGGCACGAGAATTTGATTGTGACTTCGC
TCTTTATGGATGAAAGTAAAAAATTCCTCCAGAACGTTGCCCATATCGCT
GGCAAATTGGATCTCAACCACTTGGAAAGAACCACGATGGCCTACAAACG
TTTATGTCTGGAACTAGAGTCCATGAGCAATGAGGTGACTCCAGCCGTTA
CTCCTCCGACTTCGGCTTCTGCTTCTCCGCCGACCGCGGTCTCCCCTAAT
GGACTCCGAGCAAGTGCCTCAGAATTCGTGCCCCAGGTGCCGGTGACCAG
TGACCGGATTCCCATTGAAATGGACAATGATGAACAGGATGATGATTCGG
ATGACGATGGCTACGATGAGGAGCGCAAGAGAGCTCCAAAGCCCGCAATA
TACGGCATCCGGTTTTATAACCATCATTACGAGTCCGACGACGTGAGCGA
AAATCACTTGCAGGCGGAAAAGAAGCGAAAGTTGGGCTATAGGACTCCAA
AGTTTCGGCCAAACCAGCCGACTTGCCGGTCCCCAAAGTCGGAAACGGAC
TTTATTCCCACTGCTAAGCCTCCGCCGGAATTGGCCAATGGACAGCCGCA
TTTCAATGGACCCTACATGCCGCTTCTGCAGCACCGAATCGCCAACGCAG
AGGCCTACGGGCTCATCCAGGGTTCCGACGAGCGGAACAGCCTGCTCCTG
GATGACATGGTTAAGCAACTGGCCCGCCTGGACAACTGTCCCGTCAATCT
GAGTTCACTTTTCCCGAAAAAAGGTGACCAGAAACCAGAACCCTAGATCG
CTCTGAATGTTCTGTAAAAAACTATGAGTTTCTTATTAAAAGGAGGCTTT
GACTTAGTAAAAAAAAAAAAAAA

IP11792.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG14876-RB 938 CG14876-RB 108..936 281..1109 4145 100 Plus
CG9896-RA 2217 CG9896-RA 1460..1607 1..148 740 100 Plus
CG9896-RA 2217 CG9896-RA 1329..1444 259..144 580 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:11:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11658057..11658529 1108..636 2335 99.6 Minus
chr3R 27901430 chr3R 11658645..11658999 635..281 1775 100 Minus
chr2R 21145070 chr2R 18880681..18880828 148..1 740 100 Minus
chr2R 21145070 chr2R 18880844..18880959 144..259 580 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:10:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15833461..15833934 1109..636 2370 100 Minus
3R 32079331 3R 15834036..15834390 635..281 1775 100 Minus
2R 25286936 2R 22994197..22994344 148..1 740 100 Minus
2R 25286936 2R 22994360..22994475 144..259 580 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15574292..15574765 1109..636 2370 100 Minus
3R 31820162 3R 15574867..15575221 635..281 1775 100 Minus
2R 25260384 2R 22995396..22995543 148..1 740 100 Minus
2R 25260384 2R 22995559..22995674 144..259 580 100 Plus
Blast to na_te.dros performed on 2019-03-15 22:11:08 has no hits.

IP11792.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:12:03 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11658057..11658529 636..1108 99 <- Minus
chr3R 11658645..11658999 281..635 100 == Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:50:21 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG14876-RB 1..741 306..1046 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:40:54 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG14876-RB 1..741 306..1046 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:11:00 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43317-RA 1..741 306..1046 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:16:33 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG14876-RB 1..741 306..1046 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:14:11 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43317-RA 1..741 306..1046 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:13:52 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG14876-RB 36..863 281..1108 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:40:54 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG14876-RB 36..863 281..1108 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:11:00 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43317-RA 36..863 281..1108 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:33 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG14876-RB 36..863 281..1108 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:11 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
CG43317-RA 36..863 281..1108 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:12:03 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15833462..15833934 636..1108 100 <- Minus
3R 15834036..15834390 281..635 100 == Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:12:03 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15833462..15833934 636..1108 100 <- Minus
3R 15834036..15834390 281..635 100 == Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:12:03 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15833462..15833934 636..1108 100 <- Minus
3R 15834036..15834390 281..635 100 == Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:11:00 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11659184..11659656 636..1108 100 <- Minus
arm_3R 11659758..11660112 281..635 100 == Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:03:14 Download gff for IP11792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15574293..15574765 636..1108 100 <- Minus
3R 15574867..15575221 281..635 100 == Minus

IP11792.pep Sequence

Translation from 218 to 1045

> IP11792.pep
MHTNIHNILNVYFTSCRIRHENLIVTSLFMDESKKFLQNVAHIAGKLDLN
HLERTTMAYKRLCLELESMSNEVTPAVTPPTSASASPPTAVSPNGLRASA
SEFVPQVPVTSDRIPIEMDNDEQDDDSDDDGYDEERKRAPKPAIYGIRFY
NHHYESDDVSENHLQAEKKRKLGYRTPKFRPNQPTCRSPKSETDFIPTAK
PPPELANGQPHFNGPYMPLLQHRIANAEAYGLIQGSDERNSLLLDDMVKQ
LARLDNCPVNLSSLFPKKGDQKPEP*

IP11792.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16477-PA 215 GF16477-PA 1..205 57..265 653 63.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20355-PA 361 GG20355-PA 1..212 57..272 813 77.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG43317-PA 246 CG14876-PB 1..246 30..275 1306 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:28:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21735-PA 250 GL21735-PA 132..192 197..254 161 50.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:28:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13313-PA 239 GA13313-PA 135..195 197..254 162 50.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:28:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25752-PA 336 GM25752-PA 1..218 57..274 977 90.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:28:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20326-PA 489 GD20326-PA 1..245 30..274 1109 91 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26358-PA 362 GE26358-PA 1..215 57..274 832 80.5 Plus

IP11792.hyp Sequence

Translation from 281 to 1045

> IP11792.hyp
NLIVTSLFMDESKKFLQNVAHIAGKLDLNHLERTTMAYKRLCLELESMSN
EVTPAVTPPTSASASPPTAVSPNGLRASASEFVPQVPVTSDRIPIEMDND
EQDDDSDDDGYDEERKRAPKPAIYGIRFYNHHYESDDVSENHLQAEKKRK
LGYRTPKFRPNQPTCRSPKSETDFIPTAKPPPELANGQPHFNGPYMPLLQ
HRIANAEAYGLIQGSDERNSLLLDDMVKQLARLDNCPVNLSSLFPKKGDQ
KPEP*

IP11792.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG43317-PA 246 CG14876-PB 1..246 9..254 1306 100 Plus