IP11792.complete Sequence
1123 bp (1123 high quality bases) assembled on 2005-05-04
GenBank Submission: BT022492
> IP11792.complete
TGGATATAGGCTAGCTAGTTAGAATCAGTGTTGAGTGTGGCAGGCAGGTT
AGTTGTTGTTGGCCTTACTTTCCAGTCGTCGTCGATCGTGCAATACTAGA
GTTTCGTTGAGTTTGTTGAAGTTGTCCAGGCTTTAAGTGTAGGCATATCC
GCATATATATATACATATATATATACGATCTTGACTCTGCTCTCATATTC
CCTATAGATCTTTGATATATGCATACTAATATACATAACATACTTAACGT
GTATTTTACCTCGTGCCGAATTCGGCACGAGAATTTGATTGTGACTTCGC
TCTTTATGGATGAAAGTAAAAAATTCCTCCAGAACGTTGCCCATATCGCT
GGCAAATTGGATCTCAACCACTTGGAAAGAACCACGATGGCCTACAAACG
TTTATGTCTGGAACTAGAGTCCATGAGCAATGAGGTGACTCCAGCCGTTA
CTCCTCCGACTTCGGCTTCTGCTTCTCCGCCGACCGCGGTCTCCCCTAAT
GGACTCCGAGCAAGTGCCTCAGAATTCGTGCCCCAGGTGCCGGTGACCAG
TGACCGGATTCCCATTGAAATGGACAATGATGAACAGGATGATGATTCGG
ATGACGATGGCTACGATGAGGAGCGCAAGAGAGCTCCAAAGCCCGCAATA
TACGGCATCCGGTTTTATAACCATCATTACGAGTCCGACGACGTGAGCGA
AAATCACTTGCAGGCGGAAAAGAAGCGAAAGTTGGGCTATAGGACTCCAA
AGTTTCGGCCAAACCAGCCGACTTGCCGGTCCCCAAAGTCGGAAACGGAC
TTTATTCCCACTGCTAAGCCTCCGCCGGAATTGGCCAATGGACAGCCGCA
TTTCAATGGACCCTACATGCCGCTTCTGCAGCACCGAATCGCCAACGCAG
AGGCCTACGGGCTCATCCAGGGTTCCGACGAGCGGAACAGCCTGCTCCTG
GATGACATGGTTAAGCAACTGGCCCGCCTGGACAACTGTCCCGTCAATCT
GAGTTCACTTTTCCCGAAAAAAGGTGACCAGAAACCAGAACCCTAGATCG
CTCTGAATGTTCTGTAAAAAACTATGAGTTTCTTATTAAAAGGAGGCTTT
GACTTAGTAAAAAAAAAAAAAAA
IP11792.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:23:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14876-RB | 938 | CG14876-RB | 108..936 | 281..1109 | 4145 | 100 | Plus |
CG9896-RA | 2217 | CG9896-RA | 1460..1607 | 1..148 | 740 | 100 | Plus |
CG9896-RA | 2217 | CG9896-RA | 1329..1444 | 259..144 | 580 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:11:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 11658057..11658529 | 1108..636 | 2335 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 11658645..11658999 | 635..281 | 1775 | 100 | Minus |
chr2R | 21145070 | chr2R | 18880681..18880828 | 148..1 | 740 | 100 | Minus |
chr2R | 21145070 | chr2R | 18880844..18880959 | 144..259 | 580 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:10:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:11:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15833461..15833934 | 1109..636 | 2370 | 100 | Minus |
3R | 32079331 | 3R | 15834036..15834390 | 635..281 | 1775 | 100 | Minus |
2R | 25286936 | 2R | 22994197..22994344 | 148..1 | 740 | 100 | Minus |
2R | 25286936 | 2R | 22994360..22994475 | 144..259 | 580 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 15574292..15574765 | 1109..636 | 2370 | 100 | Minus |
3R | 31820162 | 3R | 15574867..15575221 | 635..281 | 1775 | 100 | Minus |
2R | 25260384 | 2R | 22995396..22995543 | 148..1 | 740 | 100 | Minus |
2R | 25260384 | 2R | 22995559..22995674 | 144..259 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 22:11:08 has no hits.
IP11792.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:12:03 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 11658057..11658529 | 636..1108 | 99 | <- | Minus |
chr3R | 11658645..11658999 | 281..635 | 100 | == | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:50:21 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14876-RB | 1..741 | 306..1046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:40:54 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14876-RB | 1..741 | 306..1046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:11:00 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43317-RA | 1..741 | 306..1046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:16:33 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14876-RB | 1..741 | 306..1046 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:14:11 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43317-RA | 1..741 | 306..1046 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:13:52 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14876-RB | 36..863 | 281..1108 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:40:54 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14876-RB | 36..863 | 281..1108 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:11:00 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43317-RA | 36..863 | 281..1108 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:33 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14876-RB | 36..863 | 281..1108 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:11 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43317-RA | 36..863 | 281..1108 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:12:03 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15833462..15833934 | 636..1108 | 100 | <- | Minus |
3R | 15834036..15834390 | 281..635 | 100 | == | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:12:03 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15833462..15833934 | 636..1108 | 100 | <- | Minus |
3R | 15834036..15834390 | 281..635 | 100 | == | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:12:03 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15833462..15833934 | 636..1108 | 100 | <- | Minus |
3R | 15834036..15834390 | 281..635 | 100 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:11:00 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11659184..11659656 | 636..1108 | 100 | <- | Minus |
arm_3R | 11659758..11660112 | 281..635 | 100 | == | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:03:14 Download gff for
IP11792.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15574293..15574765 | 636..1108 | 100 | <- | Minus |
3R | 15574867..15575221 | 281..635 | 100 | == | Minus |
IP11792.pep Sequence
Translation from 218 to 1045
> IP11792.pep
MHTNIHNILNVYFTSCRIRHENLIVTSLFMDESKKFLQNVAHIAGKLDLN
HLERTTMAYKRLCLELESMSNEVTPAVTPPTSASASPPTAVSPNGLRASA
SEFVPQVPVTSDRIPIEMDNDEQDDDSDDDGYDEERKRAPKPAIYGIRFY
NHHYESDDVSENHLQAEKKRKLGYRTPKFRPNQPTCRSPKSETDFIPTAK
PPPELANGQPHFNGPYMPLLQHRIANAEAYGLIQGSDERNSLLLDDMVKQ
LARLDNCPVNLSSLFPKKGDQKPEP*
IP11792.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:28:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16477-PA | 215 | GF16477-PA | 1..205 | 57..265 | 653 | 63.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:28:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20355-PA | 361 | GG20355-PA | 1..212 | 57..272 | 813 | 77.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43317-PA | 246 | CG14876-PB | 1..246 | 30..275 | 1306 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:28:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21735-PA | 250 | GL21735-PA | 132..192 | 197..254 | 161 | 50.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:28:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13313-PA | 239 | GA13313-PA | 135..195 | 197..254 | 162 | 50.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:28:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25752-PA | 336 | GM25752-PA | 1..218 | 57..274 | 977 | 90.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:28:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD20326-PA | 489 | GD20326-PA | 1..245 | 30..274 | 1109 | 91 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:28:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26358-PA | 362 | GE26358-PA | 1..215 | 57..274 | 832 | 80.5 | Plus |
IP11792.hyp Sequence
Translation from 281 to 1045
> IP11792.hyp
NLIVTSLFMDESKKFLQNVAHIAGKLDLNHLERTTMAYKRLCLELESMSN
EVTPAVTPPTSASASPPTAVSPNGLRASASEFVPQVPVTSDRIPIEMDND
EQDDDSDDDGYDEERKRAPKPAIYGIRFYNHHYESDDVSENHLQAEKKRK
LGYRTPKFRPNQPTCRSPKSETDFIPTAKPPPELANGQPHFNGPYMPLLQ
HRIANAEAYGLIQGSDERNSLLLDDMVKQLARLDNCPVNLSSLFPKKGDQ
KPEP*
IP11792.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43317-PA | 246 | CG14876-PB | 1..246 | 9..254 | 1306 | 100 | Plus |