Clone IP11850 Report

Search the DGRC for IP11850

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:118
Well:50
Vector:pOT2
Associated Gene/TranscriptCG13409-RB
Protein status:IP11850.pep: wuzgold
Preliminary Size:1644
Sequenced Size:2126

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13409 2005-01-01 Successful iPCR screen
CG13409 2008-04-29 Release 5.5 accounting
CG13409 2008-08-15 Release 5.9 accounting
CG13409 2008-12-18 5.12 accounting

Clone Sequence Records

IP11850.complete Sequence

2126 bp (2126 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022532

> IP11850.complete
CTGGCCAAAATCGATATTTTCCACGAAAGTCGCACAAACGTCGGACGGAT
TGTGGAAGACTTGTCAATAATCTGTAAAAAAAACGCGAAAAAAAAAGAGT
TCTACGGCGTAGAGGAGATGCAGTAAAAGGCGACGGCTAGGTGGACACCG
AGCATCAGCTAGACACCCGTAATTCCTGCCAGCGGCCATGGCCAAGCCCC
ACTCGGATGCGGATGCCTCTGGCCTGGGCTACGCCTACCAGCTGCCGTCC
GGCGGCCTCCTGCTGCGCCTCAAATCTTCCCTCTCACAGTTCAGCGATTT
GTTCAGCGACTTCAGCAGGTACATCTCGCCCGCCTATCATCACGATCGCT
GCGAGCGATCCGTCCATATGCGACTCTACTCGATGCACAAGCGCGAGTTT
GTCATGGTCTTCCTGGGATTCTTCACCTGCTTCGGTCTGGGCATAGTCAT
CGGGCTGACGGGACCGCCCATAACCAGCACATCATCGCTGACCGCCCAGC
AGATTCTGGCGAACACCTCGCTGGCGCATAGCCCAACGGTCCTGGGGAAG
GGACCCTTCGCCATGAAGTCGCCGCTGACCACCACATATTCGCAGCAAAT
GTGGCTGATAGCCAAGCTGGTGACGGACAACAATGATGACGAGCGGTACG
ACAAGAGTTTCCAAGTGAGCGTCTCAATCGATGGCATAAACGAGCAGCAC
AAGCCCCAAAGTGTCCTCGGATCCGGAGTGGCTCACAACCGGACGCGGCA
CTTGGTCTGCGTACGGAACGACTGCGAGGAGTTCACGGTGATGCATCTGG
GATTCCTCGACTATGCCCACTATATTATCACTGTGCGCTTTTACGGCTTG
GAGTCATTCCATCAGAAGTATAATATACGCAGCATAACATTTTACTTCAA
GACTTACAGTCCGGACTTCACGCAGATTGAAATCTGGTTTAGGTGCATCT
TTCTGCTGTTCACCTTCATTGTCATATGCTGGTATGCCCACACCTTGCGC
AAGTATCCAATCTATGATTGGTCCATTGAGCAGCGATGGTTGTCGGTACT
CCTGCCCCTGCTCCTTTTGTACGACAGTAGGTGTTTCACCCGGATTAGTT
AGCGCGTATAGACTAATGATCTTCTACGCACAGATCCCTTCTTCCCGCTG
ATATTCCTGATGAACTCCTGGCTGCCTGGAATGCTGGACGCCATTCTGCA
AGCGACGTTCCTTTGTGCTCTACTCATGTTTTGGCTGTGCATCTACCATG
GACTGCGACAGAACGAGCGCAGCTTCGTGCGATTTTACCTGGTCAAGGTG
ATCGTCGTCCTGCCCATTTGGCTGTGCGCCATCGTTTTGGCCACGTGGGA
GAAATGCAACGAGCTGAGGGATCCCACATACAGTCACTTTGTGGATACGA
AAAACTACAATGGCTTCAAGATGTTCTTCTACATCGCCTGCTGCATGTAT
GTGCTCTATCTGGTGCTGTTGCTACTGCGGGCGTACACCGAGCTGCGCTC
CATGCCGTACTTTGATATGCGCTTGAAGTTTCTCACGCTGCTCATGCTGT
TCGTCCTGTCCATATCCATCACGGTGACGACGTGTCGCTTTGGCTTCGGC
ATCCTGGAGGATAACTTTGTCGCCTCACTTAACACCACCTATCGCAGTTC
GGCGCAGTTTATGTGCTTCTACGGACTGCTTAACTTTTACCTGTACACCA
TGGCGTATGTGTACTCGCCAGATGGACGGTTCGCCCAGGCGGAGCTGGCT
GTCACCAAGGATAATCCGGCTATTTCCATGATCGACGATTCCGACGAGGA
TGTTGTCTACGGTTCCGACGAGGAGTCACGGCGACCGCTCACCTCTGTGG
GCGGCGGTGCTGGAAAGAACGATTACGACAGCGATTGATCGGCGATTAAG
AAGTATCCGCGGCAGAACGAATACCCAAATGTTCCATAGCGCAATTGAAG
TTTTAGTGCTAAATGTGTACAAAGTATTCCCTAATATAATGCATAAATTA
ACTTAAAATTTCAAAAAATTAATCTCTGGTTGATCAATGAAACTGGAGAG
GATCGAAATATGTTTGGGTATTCATGATTAAGCTGAATTCGAAATTTATG
TTAAAAAAAAAAAAAAAAAAAAAAAA

IP11850.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13409-RB 2145 CG13409-RB 1..2111 1..2111 10555 100 Plus
CG13409-RA 2225 CG13409-RA 138..1213 1..1076 5380 100 Plus
CG13409-RA 2225 CG13409-RA 1214..2191 1134..2111 4890 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 17855037..17855674 638..1 3130 99.4 Minus
chr3R 27901430 chr3R 17853256..17853844 2102..1514 2945 100 Minus
chr3R 27901430 chr3R 17854069..17854504 1412..977 2090 98.6 Minus
chr3R 27901430 chr3R 17854714..17854971 895..638 1260 99.2 Minus
chr3R 27901430 chr3R 17853910..17854012 1514..1412 515 100 Minus
chr3R 27901430 chr3R 17854580..17854660 976..896 390 98.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:11:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22031273..22031910 638..1 3190 100 Minus
3R 32079331 3R 22029483..22030080 2111..1514 2990 100 Minus
3R 32079331 3R 22030305..22030740 1412..977 2180 100 Minus
3R 32079331 3R 22030950..22031207 895..638 1290 100 Minus
3R 32079331 3R 22030146..22030248 1514..1412 515 100 Minus
3R 32079331 3R 22030816..22030896 976..896 405 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 21772104..21772741 638..1 3190 100 Minus
3R 31820162 3R 21770314..21770911 2111..1514 2990 100 Minus
3R 31820162 3R 21771136..21771571 1412..977 2180 100 Minus
3R 31820162 3R 21771781..21772038 895..638 1290 100 Minus
3R 31820162 3R 21770977..21771079 1514..1412 515 100 Minus
3R 31820162 3R 21771647..21771727 976..896 405 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:48:06 has no hits.

IP11850.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:49:01 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 17853256..17853843 1515..2102 100 <- Minus
chr3R 17853910..17854012 1412..1514 100 <- Minus
chr3R 17854070..17854504 977..1411 98 <- Minus
chr3R 17854580..17854660 896..976 98 <- Minus
chr3R 17854714..17854970 639..895 99 <- Minus
chr3R 17855037..17855674 1..638 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:50:37 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RB 1..915 188..1102 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:04:23 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RB 1..915 188..1102 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:22:56 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RA 1..889 188..1076 100 == Plus
CG13409-RA 890..1644 1134..1888 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:49:31 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RB 1..915 188..1102 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:21:43 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RA 1..889 188..1076 100 == Plus
CG13409-RA 890..1644 1134..1888 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:51:08 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RB 1..2102 1..2102 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:04:23 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RB 1..2102 1..2102 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:22:56 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RA 1..1066 11..1076 100 == Plus
CG13409-RA 1067..2035 1134..2102 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:49:31 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RB 1..2102 1..2102 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:21:43 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
CG13409-RA 1..1066 11..1076 100 == Plus
CG13409-RA 1067..2035 1134..2102 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:49:01 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22029492..22030079 1515..2102 100 <- Minus
3R 22030146..22030248 1412..1514 100 <- Minus
3R 22030306..22030740 977..1411 100 <- Minus
3R 22030816..22030896 896..976 100 <- Minus
3R 22030950..22031206 639..895 100 <- Minus
3R 22031273..22031910 1..638 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:49:01 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22029492..22030079 1515..2102 100 <- Minus
3R 22030146..22030248 1412..1514 100 <- Minus
3R 22030306..22030740 977..1411 100 <- Minus
3R 22030816..22030896 896..976 100 <- Minus
3R 22030950..22031206 639..895 100 <- Minus
3R 22031273..22031910 1..638 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:49:01 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22029492..22030079 1515..2102 100 <- Minus
3R 22030146..22030248 1412..1514 100 <- Minus
3R 22030306..22030740 977..1411 100 <- Minus
3R 22030816..22030896 896..976 100 <- Minus
3R 22030950..22031206 639..895 100 <- Minus
3R 22031273..22031910 1..638 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:22:56 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17855214..17855801 1515..2102 100 <- Minus
arm_3R 17855868..17855970 1412..1514 100 <- Minus
arm_3R 17856028..17856462 977..1411 100 <- Minus
arm_3R 17856538..17856618 896..976 100 <- Minus
arm_3R 17856672..17856928 639..895 100 <- Minus
arm_3R 17856995..17857632 1..638 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:24:09 Download gff for IP11850.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21770323..21770910 1515..2102 100 <- Minus
3R 21770977..21771079 1412..1514 100 <- Minus
3R 21771137..21771571 977..1411 100 <- Minus
3R 21771647..21771727 896..976 100 <- Minus
3R 21771781..21772037 639..895 100 <- Minus
3R 21772104..21772741 1..638 100   Minus

IP11850.pep Sequence

Translation from 187 to 1101

> IP11850.pep
MAKPHSDADASGLGYAYQLPSGGLLLRLKSSLSQFSDLFSDFSRYISPAY
HHDRCERSVHMRLYSMHKREFVMVFLGFFTCFGLGIVIGLTGPPITSTSS
LTAQQILANTSLAHSPTVLGKGPFAMKSPLTTTYSQQMWLIAKLVTDNND
DERYDKSFQVSVSIDGINEQHKPQSVLGSGVAHNRTRHLVCVRNDCEEFT
VMHLGFLDYAHYIITVRFYGLESFHQKYNIRSITFYFKTYSPDFTQIEIW
FRCIFLLFTFIVICWYAHTLRKYPIYDWSIEQRWLSVLLPLLLLYDSRCF
TRIS*

IP11850.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16949-PA 547 GF16949-PA 1..303 1..303 1439 94.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12542-PA 547 GG12542-PA 1..303 1..303 1590 97.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19826-PA 544 GH19826-PA 1..301 1..303 1375 85.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG13409-PA 547 CG13409-PA 1..303 1..303 1583 98.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22294-PA 544 GI22294-PA 1..301 1..303 1394 86.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24010-PA 547 GL24010-PA 1..303 1..303 1438 93.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12265-PA 547 GA12265-PA 1..303 1..303 1437 93.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23671-PA 547 GM23671-PA 1..303 1..303 1588 97.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18481-PA 547 GD18481-PA 1..303 1..303 1594 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24086-PA 544 GJ24086-PA 1..301 1..303 1380 86.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13003-PA 545 GK13003-PA 1..301 1..303 1426 89.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24062-PA 547 GE24062-PA 1..303 1..303 1593 98 Plus

IP11850.hyp Sequence

Translation from 187 to 1101

> IP11850.hyp
MAKPHSDADASGLGYAYQLPSGGLLLRLKSSLSQFSDLFSDFSRYISPAY
HHDRCERSVHMRLYSMHKREFVMVFLGFFTCFGLGIVIGLTGPPITSTSS
LTAQQILANTSLAHSPTVLGKGPFAMKSPLTTTYSQQMWLIAKLVTDNND
DERYDKSFQVSVSIDGINEQHKPQSVLGSGVAHNRTRHLVCVRNDCEEFT
VMHLGFLDYAHYIITVRFYGLESFHQKYNIRSITFYFKTYSPDFTQIEIW
FRCIFLLFTFIVICWYAHTLRKYPIYDWSIEQRWLSVLLPLLLLYDSRCF
TRIS*

IP11850.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13409-PA 547 CG13409-PA 1..303 1..303 1583 98.3 Plus