BDGP Sequence Production Resources |
Search the DGRC for IP11896
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 118 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | Teh4-RB |
Protein status: | IP11896.pep: gold |
Preliminary Size: | 1551 |
Sequenced Size: | 2147 |
Gene | Date | Evidence |
---|---|---|
CG15003 | 2005-01-01 | Successful iPCR screen |
Teh4 | 2008-04-29 | Release 5.5 accounting |
Teh4 | 2008-08-15 | Release 5.9 accounting |
Teh4 | 2008-12-18 | 5.12 accounting |
2147 bp (2147 high quality bases) assembled on 2005-04-11
GenBank Submission: BT022560
> IP11896.complete CAGGAACCACTACCAGGTGGATAAATGGGGCGGCGCAAGGACAAACCGCG GGTGATTCCCGAACAGGATGCGCGCATCTGTCGCGCCATCTGCCTGTGCC AGCTGACCATGGTGCTGTCCTGCGTGTCCATCGTCTACCTAAGCGTGGCC ATCTACTCGCCCTCCCTAAAGGCCTTCAAGTCCGGCTTCGAGCTGGATCC CGTCATGTGCCAGACGGTGGATCGCCAGATGCCCAACAACTGCCCCTGGG CATCCTGCGGCGAGTGGTGCCTGACCAAGACCAGTGGCTTTTGCCCCCAG ATCCACTCAATAGTGCGTCGCAACGGCACCGATATCCAGCTGAACAACTG CACCAGAGTCACCAACACATCGTGCGCCATGATTGACCTGAGTCGGCTGA ACAAGTTCAATTGCAACAACGGCACCGCCTGCAACAATATCAGAGGCGTC TTCAACTGCTCCAATGGACACTGCAAGAATATGTCGGAGTTCTTCTTGTG TCACCACAAAGCCGATGGACTTACGGTCAATTCGCAGAAGGATAACACCA AGCTGAATGGATTCTTCGAGTGTCACGGGGTGCACTGCACCAAGATCAAG AAGCCCTTCAGCTGCGATCGCTACTGTTCCAAGATAACAACTACCAATGT GAACACCCTTATTATGCACGAGGATAATCTTATTGCCGCCGATTGTGAGA ACGCAGTGGCTTTCAACCAAGCCCGAGGATCCGAGCACGGTGTGCGTATC GAACCCTTTGAGTTTTGGAAAGAGGATGATGGCAACCTGCTGACCAACTG CGCCACAGTCACAAGAGAGTCGGACAATCGCATCACTGCCACGGACTGCA TAAATGGAACCCTCCTGGAACATGACACCTTGCCCGCTCCCTTCATGAAC TTCACCCAGTTTTGGGCCATCTATGAGAACAGCACCAGGTCGGTGGATCC CGAGCAGAGGTACCTGCCCAACCAGGCCAACCTGACCATCTACAGCTGGA AGAAACTGTTCATCAACCTGGAGGGCTGCGTGAACACACTGCGTGGGGAG TGCAAGGACTTTGTGGCTCGCTATGGCAACGATGGCGATAACAACACCGC CCAGTCACGCTACCAGTGCTACTATAACAAGGACTCGAATGTGGAGTTTG TGGTTGCACGCTACGATTTGGACAAGGTTTACAGGGAGCTTCTAGTCTCG CTGATTGTGCCCATTGTGCTCTTTGTGATCTCATCTATATCGTTATGTAT CATCACCAAATCCGTCAAGGTGGGTGACGATGCCAAGATGCGCTGTGTTT GTGCCGGCGATGATTCAGATAATGATGGCCCCTTTGGCCCAGGACTAGCA AACAAGCAGCAGGATCAGATGTACGATACAGACGACGATGTAGTTGACCT GGAGCACCAAGCGGTGGATGGTCAAGAACTATCGGACCACGGACTTCCGC TGGACAACCAAGAGCTAATCGGTAGCACCAAGTCGTTGATACCAATCAGT CCCGTCGGAGAATCCGGAACTAGTGATCAAATCTTTGACCAGGATCAGGA GAAAGCAACTACGTGCGATGTTCCCGAGAAACCACTAGTCATACTATAAG CGGATTAACCGCATCGAAAGAAGGATACAAAACAGCACCAAACTTTAAGG ACCTGTGCATTGTACAAGGGGAACTGAATTTAAATTCTAATCAGCGCATT TATACAACGTTTACAACAACTAACAGATTAATGAAACGGATCTTTACTTT GCTTGGTTGAAAAATGATAATCACACATATATAAATACTGGACATATAGC TCCCAGATGAACAACGATGGGATGGCCGAGCTTTATATACCCGATCCCCA CTCTAACCGTTGCAGCAGATGGGCCTTAGACATAGTTGCATTTATATAGA GTATATAGCATAAACCAACTGACATCTGCTGAACGAAACCAAAGAAGAAA ACACCAGGACAGACCAAGGATATAGGCATCCGACTCGCCTTAACTCTCGA CTTTGTAGCTATGCAATATTCAGCGATTTCTTAAACTAGTTTAACCGGTG GAGCAATAGTACCTACTTATATCTGATATACTTATACTCGAATTATAGCA AATAAAACACCATTTGGAATTCTCTCTACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 4174245..4175106 | 2129..1268 | 4310 | 100 | Minus |
chr3L | 24539361 | chr3L | 4175389..4175684 | 1132..837 | 1480 | 100 | Minus |
chr3L | 24539361 | chr3L | 4176606..4176816 | 381..171 | 1055 | 100 | Minus |
chr3L | 24539361 | chr3L | 4175968..4176172 | 670..466 | 1025 | 100 | Minus |
chr3L | 24539361 | chr3L | 4176883..4177053 | 171..1 | 855 | 100 | Minus |
chr3L | 24539361 | chr3L | 4175738..4175904 | 836..670 | 835 | 100 | Minus |
chr3L | 24539361 | chr3L | 4175169..4175315 | 1276..1130 | 735 | 100 | Minus |
chr3L | 24539361 | chr3L | 4176235..4176321 | 467..381 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 4174856..4175720 | 2132..1268 | 4325 | 100 | Minus |
3L | 28110227 | 3L | 4176003..4176298 | 1132..837 | 1480 | 100 | Minus |
3L | 28110227 | 3L | 4177220..4177430 | 381..171 | 1055 | 100 | Minus |
3L | 28110227 | 3L | 4176582..4176786 | 670..466 | 1025 | 100 | Minus |
3L | 28110227 | 3L | 4177497..4177667 | 171..1 | 855 | 100 | Minus |
3L | 28110227 | 3L | 4176352..4176518 | 836..670 | 835 | 100 | Minus |
3L | 28110227 | 3L | 4175783..4175929 | 1276..1130 | 735 | 100 | Minus |
3L | 28110227 | 3L | 4176849..4176935 | 467..381 | 435 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 4174856..4175720 | 2132..1268 | 4325 | 100 | Minus |
3L | 28103327 | 3L | 4176003..4176298 | 1132..837 | 1480 | 100 | Minus |
3L | 28103327 | 3L | 4177220..4177430 | 381..171 | 1055 | 100 | Minus |
3L | 28103327 | 3L | 4176582..4176786 | 670..466 | 1025 | 100 | Minus |
3L | 28103327 | 3L | 4177497..4177667 | 171..1 | 855 | 100 | Minus |
3L | 28103327 | 3L | 4176352..4176518 | 836..670 | 835 | 100 | Minus |
3L | 28103327 | 3L | 4175783..4175929 | 1276..1130 | 735 | 100 | Minus |
3L | 28103327 | 3L | 4176849..4176935 | 467..381 | 435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 4175390..4175684 | 837..1131 | 100 | <- | Minus |
chr3L | 4175738..4175904 | 670..836 | 100 | <- | Minus |
chr3L | 4174245..4175104 | 1270..2129 | 100 | <- | Minus |
chr3L | 4175176..4175313 | 1132..1269 | 100 | <- | Minus |
chr3L | 4175969..4176171 | 467..669 | 100 | <- | Minus |
chr3L | 4176236..4176320 | 382..466 | 100 | <- | Minus |
chr3L | 4176606..4176816 | 171..381 | 100 | <- | Minus |
chr3L | 4176884..4177053 | 1..170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RA | 1..319 | 25..343 | 100 | == | Plus |
Teh4-RA | 320..1551 | 367..1599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RB | 1..1575 | 25..1599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RB | 1..1575 | 25..1599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RA | 1..319 | 25..343 | 100 | == | Plus |
Teh4-RA | 320..1551 | 367..1599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RB | 1..1575 | 25..1599 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RA | 1..319 | 25..343 | 100 | == | Plus |
Teh4-RA | 320..1551 | 367..1599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RB | 604..2732 | 1..2129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RB | 604..2732 | 1..2129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RA | 1..319 | 25..343 | 100 | == | Plus |
Teh4-RA | 320..1551 | 367..1599 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Teh4-RB | 604..2732 | 1..2129 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4176850..4176934 | 382..466 | 100 | <- | Minus |
3L | 4177220..4177430 | 171..381 | 100 | <- | Minus |
3L | 4177498..4177667 | 1..170 | 100 | Minus | |
3L | 4176004..4176298 | 837..1131 | 100 | <- | Minus |
3L | 4176352..4176518 | 670..836 | 100 | <- | Minus |
3L | 4176583..4176785 | 467..669 | 100 | <- | Minus |
3L | 4174859..4175718 | 1270..2129 | 100 | <- | Minus |
3L | 4175790..4175927 | 1132..1269 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4176850..4176934 | 382..466 | 100 | <- | Minus |
3L | 4177220..4177430 | 171..381 | 100 | <- | Minus |
3L | 4177498..4177667 | 1..170 | 100 | Minus | |
3L | 4176004..4176298 | 837..1131 | 100 | <- | Minus |
3L | 4176352..4176518 | 670..836 | 100 | <- | Minus |
3L | 4176583..4176785 | 467..669 | 100 | <- | Minus |
3L | 4174859..4175718 | 1270..2129 | 100 | <- | Minus |
3L | 4175790..4175927 | 1132..1269 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4176850..4176934 | 382..466 | 100 | <- | Minus |
3L | 4177220..4177430 | 171..381 | 100 | <- | Minus |
3L | 4177498..4177667 | 1..170 | 100 | Minus | |
3L | 4176004..4176298 | 837..1131 | 100 | <- | Minus |
3L | 4176352..4176518 | 670..836 | 100 | <- | Minus |
3L | 4176583..4176785 | 467..669 | 100 | <- | Minus |
3L | 4174859..4175718 | 1270..2129 | 100 | <- | Minus |
3L | 4175790..4175927 | 1132..1269 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 4174859..4175718 | 1270..2129 | 100 | <- | Minus |
arm_3L | 4175790..4175927 | 1132..1269 | 100 | <- | Minus |
arm_3L | 4176004..4176298 | 837..1131 | 100 | <- | Minus |
arm_3L | 4176352..4176518 | 670..836 | 100 | <- | Minus |
arm_3L | 4176583..4176785 | 467..669 | 100 | <- | Minus |
arm_3L | 4176850..4176934 | 382..466 | 100 | <- | Minus |
arm_3L | 4177220..4177430 | 171..381 | 100 | <- | Minus |
arm_3L | 4177498..4177667 | 1..170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 4174859..4175718 | 1270..2129 | 100 | <- | Minus |
3L | 4175790..4175927 | 1132..1269 | 100 | <- | Minus |
3L | 4176004..4176298 | 837..1131 | 100 | <- | Minus |
3L | 4176352..4176518 | 670..836 | 100 | <- | Minus |
3L | 4176583..4176785 | 467..669 | 100 | <- | Minus |
3L | 4176850..4176934 | 382..466 | 100 | <- | Minus |
3L | 4177220..4177430 | 171..381 | 100 | <- | Minus |
3L | 4177498..4177667 | 1..170 | 100 | Minus |
Translation from 24 to 1598
> IP11896.hyp MGRRKDKPRVIPEQDARICRAICLCQLTMVLSCVSIVYLSVAIYSPSLKA FKSGFELDPVMCQTVDRQMPNNCPWASCGEWCLTKTSGFCPQIHSIVRRN GTDIQLNNCTRVTNTSCAMIDLSRLNKFNCNNGTACNNIRGVFNCSNGHC KNMSEFFLCHHKADGLTVNSQKDNTKLNGFFECHGVHCTKIKKPFSCDRY CSKITTTNVNTLIMHEDNLIAADCENAVAFNQARGSEHGVRIEPFEFWKE DDGNLLTNCATVTRESDNRITATDCINGTLLEHDTLPAPFMNFTQFWAIY ENSTRSVDPEQRYLPNQANLTIYSWKKLFINLEGCVNTLRGECKDFVARY GNDGDNNTAQSRYQCYYNKDSNVEFVVARYDLDKVYRELLVSLIVPIVLF VISSISLCIITKSVKVGDDAKMRCVCAGDDSDNDGPFGPGLANKQQDQMY DTDDDVVDLEHQAVDGQELSDHGLPLDNQELIGSTKSLIPISPVGESGTS DQIFDQDQEKATTCDVPEKPLVIL*
Translation from 24 to 1598
> IP11896.pep MGRRKDKPRVIPEQDARICRAICLCQLTMVLSCVSIVYLSVAIYSPSLKA FKSGFELDPVMCQTVDRQMPNNCPWASCGEWCLTKTSGFCPQIHSIVRRN GTDIQLNNCTRVTNTSCAMIDLSRLNKFNCNNGTACNNIRGVFNCSNGHC KNMSEFFLCHHKADGLTVNSQKDNTKLNGFFECHGVHCTKIKKPFSCDRY CSKITTTNVNTLIMHEDNLIAADCENAVAFNQARGSEHGVRIEPFEFWKE DDGNLLTNCATVTRESDNRITATDCINGTLLEHDTLPAPFMNFTQFWAIY ENSTRSVDPEQRYLPNQANLTIYSWKKLFINLEGCVNTLRGECKDFVARY GNDGDNNTAQSRYQCYYNKDSNVEFVVARYDLDKVYRELLVSLIVPIVLF VISSISLCIITKSVKVGDDAKMRCVCAGDDSDNDGPFGPGLANKQQDQMY DTDDDVVDLEHQAVDGQELSDHGLPLDNQELIGSTKSLIPISPVGESGTS DQIFDQDQEKATTCDVPEKPLVIL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23882-PA | 524 | GF23882-PA | 1..524 | 1..524 | 2616 | 91.6 | Plus |
Dana\GF23880-PA | 448 | GF23880-PA | 1..413 | 1..423 | 819 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14214-PA | 524 | GG14214-PA | 1..524 | 1..524 | 2797 | 98.7 | Plus |
Dere\GG14212-PA | 448 | GG14212-PA | 1..413 | 1..423 | 798 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15551-PA | 530 | GH15551-PA | 1..530 | 1..524 | 2370 | 85.3 | Plus |
Dgri\GH15549-PA | 449 | GH15549-PA | 1..413 | 1..423 | 825 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Teh4-PB | 524 | CG15003-PB | 1..524 | 1..524 | 2837 | 100 | Plus |
Teh3-PA | 448 | CG18676-PA | 1..413 | 1..423 | 820 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16826-PA | 525 | GI16826-PA | 1..525 | 1..524 | 2400 | 84.5 | Plus |
Dmoj\GI16824-PA | 448 | GI16824-PA | 1..413 | 1..423 | 818 | 41.5 | Plus |
Dmoj\GI21411-PA | 75 | GI21411-PA | 1..63 | 1..61 | 188 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12734-PA | 129 | GL12734-PA | 1..125 | 1..133 | 633 | 88 | Plus |
Dper\GL12732-PA | 331 | GL12732-PA | 1..212 | 1..206 | 461 | 44.1 | Plus |
Dper\GL20473-PA | 77 | GL20473-PA | 1..77 | 449..524 | 309 | 79.2 | Plus |
Dper\GL12732-PA | 331 | GL12732-PA | 208..296 | 334..423 | 224 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13421-PA | 524 | GA13421-PA | 1..524 | 1..524 | 2563 | 89.9 | Plus |
Dpse\GA15048-PA | 448 | GA15048-PA | 1..413 | 1..423 | 819 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14006-PA | 519 | GM14006-PA | 1..519 | 1..524 | 2743 | 97.5 | Plus |
Dsec\GM14004-PA | 448 | GM14004-PA | 1..413 | 1..423 | 797 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13287-PA | 524 | GD13287-PA | 1..524 | 1..524 | 2793 | 98.7 | Plus |
Dsim\GD13284-PA | 448 | GD13284-PA | 1..413 | 1..423 | 797 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12574-PA | 518 | GJ12574-PA | 1..518 | 1..524 | 2363 | 86.8 | Plus |
Dvir\GJ12572-PA | 448 | GJ12572-PA | 1..413 | 1..423 | 828 | 42.5 | Plus |