BDGP Sequence Production Resources |
Search the DGRC for IP11908
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 119 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | Ppat-Dpck-RA |
Protein status: | IP11908.pep: gold |
Preliminary Size: | 1557 |
Sequenced Size: | 1730 |
Gene | Date | Evidence |
---|---|---|
CG10575 | 2005-01-01 | Successful iPCR screen |
CG10575 | 2008-04-29 | Release 5.5 accounting |
CG10575 | 2008-08-15 | Release 5.9 accounting |
CG10575 | 2008-12-18 | 5.12 accounting |
1730 bp (1730 high quality bases) assembled on 2006-01-24
GenBank Submission: BT024307
> IP11908.complete TAGCCTTCATAATTAGTCGCAATCAATCGAGCAGAATGGCTTCATCCACA GGTCTCCTGGTGGTGTCCAACATCAAGCACCTTGGCAAATCCCTGCGAGC CATCGAGAAGTACGTGAATTCACTGTACATCCACCTAAATGTGGCGGGGT CAACGTCCACGACGTCACCAGTTCCACCGCCTCCGGTTTGGGGTCGTCTA ATCTCGCAGCTGTACGCCAACAGCAGCAGCTATGTGGGCAAGCAGTTGGA CCTTCGCGTCCTTGTCTCTCCCCTACGACCAGGTGCCAATGGATCCCTGA AGTTGCGCCAGCCCGTCGACCTAATCTTCTCGGATGCACATCATCCGGAG CTGTGCGACAGGCTTCGCGCGGATCTTAACATCAGCAAGCCAACAATCTT CCTGGATGACTCGGTCATCTCGGATTTAAGTGCCCAGCAGGATGACACCC AGCCGCCTAAGGTGTATCCCTCGGTTGTCCTGGGCGGAACATTCGATCGC ATCCATCTGGGACACAAGATATTCCTCACCCAGGCTGTACTGCGCACCTG CAAGCGTTTGGTTGTGGGCGTAACCACCTCCGCCATGACGAAGGGAAAGA CGCTGCCGGACTTGATTTTGCCCGTGGAAGAGCGCATCGCCCGGCTAAGG GAGTTCCTGGTGGACATAGATGATACGCTGCAGTACGAAATTGTGCCCAT CGATGATCCCTTTGGTCCCACGCAAGTGGATCCTGACCTGGACATGATTG TGGTCAGTGCGGAGACGTTGCGAGGAGGGCAGAAGGTCAACGAGGTACGC TCCGCTAAGCAACTGCGCGAGCTGGAGATCTTTGTGATTGACATTGTTGA AAGCAACGTGCATGATGGCATCCACGAGACCAAGGTCAGCTCGAGTAACA CACGCATCGATCTGCTGGGAACCCGCTGGAGAAGGCCGGAGCCACGACCA CAGCTCCCGCCGCGCCCTTACATTATTGGACTCACTGGCGGCATCGCATC TGGCAAGAGCAAGATGGGCGAGAGATTGGCCAACATGGGCGCCCACGTGA TCGACTGCGATAAGGTGGCGCACGATGTTTACGAACCTGGTCAGTTGTGC TACACCCGAATTGTGCAGCACTTCGGACAGGGTATTGTTTCAGACGATGG TCGCATCGATCGGTCCAAGCTGGGACCCTTGGTGTTTGCCGATCCCAAGC AGTTGCAAGCACTCAACGGCATTGTCTGGCCGGAACTTATTGCGGAGGTT AACAGGCGGCTGGATGCACTGCGTTCCCAGGCGGACGTGCCGCGTGTGGT GGTCCTGGAGGCAGCGGTGCTGCTGCGAGCGGGCTGGGAGACCAATTGCC ATGAGGTGTGGTCCATGATTGTGCCACCGGATGAGGCTGTGCGGCGGATT ATTGAGCGCAACAAGTTGAGCGAAGTGGAGGCCCAAAAGCGACTGGCCAG TCAGGTGCCCAATTCTGAGATCGTGGCCAAGTCGCATGTGATATTCAGTT CGCAATGGGATCACGAATTCACCCAGAAACAGGCGGAGCGTGCGTGGAAA ATGCTTACCAAGGAACTGGACTCTTACCAGAGCAGCCTTTAACCCGATGG ATATTTAGATTATCTTGTTGATCCTTATTTTGTATGATTTTTTATGCATT TGTTGTATATTGTTTAGTTGTAAGTCCAAAGTTGAAAAGAAATGCTGGGA CGTCATTGGGGAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5759540..5760656 | 595..1711 | 99 | <- | Minus |
chr3L | 5760724..5761317 | 1..594 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10575-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppat-Dpck-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppat-Dpck-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10575-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppat-Dpck-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10575-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppat-Dpck-RA | 1..1711 | 1..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppat-Dpck-RA | 1..1711 | 1..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10575-RA | 1..1557 | 36..1592 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppat-Dpck-RA | 1..1711 | 1..1711 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5767017..5768133 | 595..1711 | 100 | <- | Minus |
3L | 5768201..5768794 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5767017..5768133 | 595..1711 | 100 | <- | Minus |
3L | 5768201..5768794 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5767017..5768133 | 595..1711 | 100 | <- | Minus |
3L | 5768201..5768794 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5760117..5761233 | 595..1711 | 100 | <- | Minus |
arm_3L | 5761301..5761894 | 1..594 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5760117..5761233 | 595..1711 | 100 | <- | Minus |
3L | 5761301..5761894 | 1..594 | 100 | Minus |
Translation from 2 to 1591
> IP11908.hyp AFIISRNQSSRMASSTGLLVVSNIKHLGKSLRAIEKYVNSLYIHLNVAGS TSTTSPVPPPPVWGRLISQLYANSSSYVGKQLDLRVLVSPLRPGANGSLK LRQPVDLIFSDAHHPELCDRLRADLNISKPTIFLDDSVISDLSAQQDDTQ PPKVYPSVVLGGTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMTKGKT LPDLILPVEERIARLREFLVDIDDTLQYEIVPIDDPFGPTQVDPDLDMIV VSAETLRGGQKVNEVRSAKQLRELEIFVIDIVESNVHDGIHETKVSSSNT RIDLLGTRWRRPEPRPQLPPRPYIIGLTGGIASGKSKMGERLANMGAHVI DCDKVAHDVYEPGQLCYTRIVQHFGQGIVSDDGRIDRSKLGPLVFADPKQ LQALNGIVWPELIAEVNRRLDALRSQADVPRVVVLEAAVLLRAGWETNCH EVWSMIVPPDEAVRRIIERNKLSEVEAQKRLASQVPNSEIVAKSHVIFSS QWDHEFTQKQAERAWKMLTKELDSYQSSL*
Translation from 35 to 1591
> IP11908.pep MASSTGLLVVSNIKHLGKSLRAIEKYVNSLYIHLNVAGSTSTTSPVPPPP VWGRLISQLYANSSSYVGKQLDLRVLVSPLRPGANGSLKLRQPVDLIFSD AHHPELCDRLRADLNISKPTIFLDDSVISDLSAQQDDTQPPKVYPSVVLG GTFDRIHLGHKIFLTQAVLRTCKRLVVGVTTSAMTKGKTLPDLILPVEER IARLREFLVDIDDTLQYEIVPIDDPFGPTQVDPDLDMIVVSAETLRGGQK VNEVRSAKQLRELEIFVIDIVESNVHDGIHETKVSSSNTRIDLLGTRWRR PEPRPQLPPRPYIIGLTGGIASGKSKMGERLANMGAHVIDCDKVAHDVYE PGQLCYTRIVQHFGQGIVSDDGRIDRSKLGPLVFADPKQLQALNGIVWPE LIAEVNRRLDALRSQADVPRVVVLEAAVLLRAGWETNCHEVWSMIVPPDE AVRRIIERNKLSEVEAQKRLASQVPNSEIVAKSHVIFSSQWDHEFTQKQA ERAWKMLTKELDSYQSSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10448-PA | 524 | GF10448-PA | 2..524 | 3..518 | 2300 | 84.3 | Plus |
Dana\GF17648-PA | 236 | GF17648-PA | 2..198 | 312..509 | 256 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14115-PA | 520 | GG14115-PA | 1..520 | 1..518 | 2476 | 93.1 | Plus |
Dere\GG13797-PA | 236 | GG13797-PA | 2..188 | 312..503 | 230 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15947-PA | 518 | GH15947-PA | 2..512 | 3..515 | 2091 | 76.5 | Plus |
Dgri\GH19000-PA | 236 | GH19000-PA | 2..196 | 312..507 | 234 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ppat-Dpck-PA | 518 | CG10575-PA | 1..518 | 1..518 | 2657 | 100 | Plus |
Dpck-PA | 236 | CG1939-PA | 2..196 | 312..507 | 243 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16599-PA | 514 | GI16599-PA | 2..507 | 3..512 | 2110 | 77.3 | Plus |
Dmoj\GI24502-PA | 236 | GI24502-PA | 2..196 | 312..507 | 233 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16316-PA | 517 | GL16316-PA | 2..515 | 3..517 | 2275 | 81.7 | Plus |
Dper\GL11944-PA | 233 | GL11944-PA | 2..205 | 312..516 | 232 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10406-PA | 517 | GA10406-PA | 2..515 | 3..517 | 2278 | 81.9 | Plus |
Dpse\GA15141-PA | 233 | GA15141-PA | 2..205 | 312..516 | 231 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13900-PA | 518 | GM13900-PA | 1..518 | 1..518 | 2566 | 95.9 | Plus |
Dsec\GM10930-PA | 236 | GM10930-PA | 2..196 | 312..507 | 239 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17598-PA | 257 | GD17598-PA | 1..257 | 1..236 | 928 | 80.6 | Plus |
Dsim\GD13177-PA | 171 | GD13177-PA | 16..171 | 363..518 | 782 | 96.2 | Plus |
Dsim\GD19908-PA | 236 | GD19908-PA | 2..196 | 312..507 | 239 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12852-PA | 515 | GJ12852-PA | 2..513 | 3..517 | 2044 | 74.7 | Plus |
Dvir\GJ24567-PA | 236 | GJ24567-PA | 2..196 | 312..507 | 249 | 31 | Plus |