Clone IP11918 Report

Search the DGRC for IP11918

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:119
Well:18
Vector:pOT2
Associated Gene/TranscriptCG11360-RA
Protein status:IP11918.pep: gold
Preliminary Size:1460
Sequenced Size:2468

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11360 2005-01-01 Successful iPCR screen
CG11360 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP11918.complete Sequence

2468 bp (2468 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022576

> IP11918.complete
TCCATATCATCCGTCAATTTCTCTCGGCTTCCGTTCCACCGAGCTCCTCC
TCATTGCGCGAGATTGCTGTTGCACCGGTTTTCATTACCATGGCGGCTCA
GGTCACACCAAAGATCTCTACATGCATTAACTCGAAAGGGTCTATCCAGA
AAAAAAATCAAGCACAACATCACGATATGTCTGAACAATCCAAAGTCAAT
GAATCAACGCTACCACTATCCGACGATCCGAGGACACTGCAATTGGCATT
GGAACTATCATTGGTCGGATTTAACGACAATCAAAATTGCTATGCGCAGC
CTGCTCAACCGCTACCAATGCCCCTAAGTGCACGAAGTGACTTTGAAATA
GGGACCATCAACAGCACGCTACCAATTCCATCGGCACCGAACTGTCTTCT
ATTACCGAATGCCGGCGCCGTCAGTTCAGAAGATCGATCTAAGAAGTCGC
AAAATATGACCGAATGTGTTCCAGTCCCCAGTTCTGAACATGTAGCAGAA
ATAGTGGGCAGGCAGGGGTGCAAAATTAAAGCTTTGAGAGCCAAAACCAA
CACTTACATTAAGACACCAGTTCGAGGAGAGGAGCCTGTGTTCGTTGTGA
CTGGTCGAAAGGAAGATGTAAACAAGGCTAAACGAGAAATACTTTCTGCT
GCCGACCACTTTAGCTTAATTCGCGCATCACGTAAGCCTGTAAGCGATAG
TCAGAACAATGGAATGGTAGGAAGTACGACTAGCTCCGGTGGTGGTGCAG
TTCCCCGCATGTCAGGTCCCCCTTGTATGCCTGGACAGGTTACCATACAG
GTACGTGTACCTTATCGGGTAGTTGGACTCGTTGTTGGGCCAAAAGGTGC
TACTATCAAACATATTCAACAAGAGACGCAAACTTACATTGTGACACCAT
CGCGAGAAAAGGAACCAATTTTTGAAGTGACTGGCTTGCCAGATAACGTT
GATACTGCACGAAAGCAAATAGAAGCTCACATTGCCCTTAGAACTGGTAG
CGGATCTGGAAGTGGTGATGCTATTACTATGCAAAGTAGTGATTCGGTCG
ATACTAAAGAATACGCGTCACTGCCTTCATTAACTCAAATTTTAAATGAT
GATTTAAATTCGGAAATTCTATCGTCCATATACAAAAATTCCGTTCCGTC
TACGCAGGAGTATGCAAATAATTCAATGAAGACGGTTGTAAACGTAAGCA
ATTCAGTGAAACTTGTGCAAGGACATCATACTGGGAACTGTTTTCAAAAA
TCAGAGTTTGCTGAGATGGAAATGACAGCAAATATAACAGCAGCAGATAT
ATTAGATAAACGTCTTCCTGGAAATGAAGTTTCTGTGCCTTTGGCCAAAG
CTAATGTTGCTAATATTGTTTTTCGCACTACGTCTAGTAAAACATTGTCT
TTCTGTCCTCCCACATCTACATCGGCATCGTTTCATTCCAACTGTAATGC
AAATATTTTAACAAGATCTTGTTCATCCGCTTCTTCTACCACTTCTACAA
AAAGTACCAACAATAGCGCCAATACACCTCCAGAAATATTAAATATATGG
AAAAGTATTAGTGATTCAATTGACGTTGACGAGGGTATAGGCGACTCTCC
TAGTATTTGGAACCAACCGGCAAATATCATACCCACAGCTCATTGCTCGC
CCACAATATCAATTAGTCCTACCGACTCACTGTTAGGTATGGGTGAACAT
TCTGCAAATCAACAAAATTTGAACCATGCTAAAGAGCCCATTATGCCTAA
TCTCCCGCAAAAGATAAAAGGCATTCAAGTGCAATCTAACGCAGACAATT
TTTTAACTCATCGAGAATGCTTTGTATGTAATGAAAATACTGTTACCACT
GCTTTGGTTCCGTGTGGTCACAATATGTTTTGTATGGAGTGCGCCAATCA
CATCTGTCTTTCTATGGATGCAGTTTGTCCGGTTTGTAATTCTATTGTTT
ACCATGCAATGCGGATTTTAGGATAATTTGAATTTTTTTGTAAATGTATT
TAATATTTGTTAGTTTTTAGTTAGTCGGTTACACATCTAGTCGTGGCTTC
CGTGAAGTCTATTAACATTAGTTGAACGTTCAGGGATTAAAGGGAATTCT
TAATTTAAAAAAACAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC
TCCTCGTGCTTATTTGCTTTGTCAGCGCGGAAATTCTTCAACATGACTTG
TTCACCAACAACTTAAAAATGGGTCATGTCAGTGATATAAATACGCCATC
CAAGCACTTGCGCTTCACACTTATTTCCGTGTCAAAACTGACAATGCACG
GTTTGTCGTCGTCCTCATCGTCGTCGTCTCATACTTTCTCGGCTTTCTCT
CCTTGGGCGGAAATAAATAAAGACACCGCTCAATCACCCGGCGTTTCTGA
CCCCACCTAAAAATTCATAGAGCTATTCGCTATAAACGCGACTCTAAAAT
CCAAAAAAAAAAAAAAAA

IP11918.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:38:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG11360.d 2791 CG11360.d 356..2466 1..2110 10515 99.9 Plus
CG11360.e 3780 CG11360.e 472..2582 1..2110 10515 99.9 Plus
CG11360.i 2990 CG11360.i 472..2582 1..2110 10515 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 705134..706728 516..2110 7975 100 Plus
chr4 1351717 chr4 701173..701690 1..517 2540 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:11:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 684580..686174 516..2110 7975 100 Plus
4 1348131 4 680619..681136 1..517 2540 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 684580..686174 516..2110 7975 100 Plus
4 1331231 4 680619..681136 1..517 2550 99.8 Plus
Blast to na_te.dros performed on 2019-03-16 03:51:58 has no hits.

IP11918.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:52:45 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 701173..701689 1..516 99 -> Plus
chr4 705135..706732 517..2114 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:48:00 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RA 1..1887 90..1976 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:04:04 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RA 1..1887 90..1976 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:06:54 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RC 1..1887 90..1976 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:49:14 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RA 1..1887 90..1976 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:17:51 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RC 1..1887 90..1976 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:47:54 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RA 1..2107 1..2106 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:04:04 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RA 1..2107 1..2106 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:06:54 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RC 346..2461 1..2114 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:49:14 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RA 1..1887 90..1976 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:17:51 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
CG11360-RC 346..2461 1..2114 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:52:45 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
4 680619..681140 1..521 99 <- Plus
4 684586..686178 522..2114 99 <- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:52:45 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
4 680619..681140 1..521 99 <- Plus
4 684586..686178 522..2114 99 <- Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:52:45 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
4 680619..681140 1..521 99 <- Plus
4 684586..686178 522..2114 99 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:06:54 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 701245..701766 1..521 99 <- Plus
arm_4 705212..706804 522..2114 99 <- Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:23:51 Download gff for IP11918.complete
Subject Subject Range Query Range Percent Splice Strand
4 680619..681140 1..521 99 <- Plus
4 684586..686178 522..2114 99 <- Plus

IP11918.hyp Sequence

Translation from 0 to 1975

> IP11918.hyp
SISSVNFSSASVPPSSSSLREIAVAPVFITMAAQVTPKISTCINSKGSIQ
KKNQAQHHDMSEQSKVNESTLPLSDDPRTLQLALELSLVGFNDNQNCYAQ
PAQPLPMPLSARSDFEIGTINSTLPIPSAPNCLLLPNAGAVSSEDRSKKS
QNMTECVPVPSSEHVAEIVGRQGKKIKALRAKTNTYIKTPVRGEEPVFVV
TGRKEDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGA
VPRMSGPPCMPGQVTIQVRVPYRVVGLVVGPKGATIKHIQQETQTYIVTP
SREKEPIFEVTGLPDNVDTARKQIEAHIALRTGSGSGSGDAITMQSSDSV
DTKEYASLPSLTQILNDDLNSEILSSIYKNSVPSTQEYANNSMKTVVNVS
NSVKLVQGHHTGNCFQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAK
ANVANIVFRTTSSKTLSFCPPTSTSASFHSNCNANILTRSCSSASSTTST
KSTNNSANTPPEILNIWKSISDSIDVDEGIGDSPSIWNQPANIIPTAHCS
PTISISPTDSLLGMGEHSANQQNLNHAKEPIMPNLPQKIKGIQVQSNADN
FLTHRECFVCNENTVTTALVPCGHNMFCMECANHICLSMDAVCPVCNSIV
YHAMRILG*

IP11918.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:44:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11360-PE 628 CG11360-PE 1..628 31..658 3239 99.8 Plus
CG11360-PD 628 CG11360-PD 1..628 31..658 3239 99.8 Plus
CG11360-PC 628 CG11360-PC 1..628 31..658 3239 99.8 Plus
CG11360-PA 628 CG11360-PA 1..628 31..658 3239 99.8 Plus

IP11918.pep Sequence

Translation from 2 to 1975

> IP11918.pep
HIIRQFLSASVPPSSSSLREIAVAPVFITMAAQVTPKISTCINSKGSIQK
KNQAQHHDMSEQSKVNESTLPLSDDPRTLQLALELSLVGFNDNQNCYAQP
AQPLPMPLSARSDFEIGTINSTLPIPSAPNCLLLPNAGAVSSEDRSKKSQ
NMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVT
GRKEDVNKAKREILSAADHFSLIRASRKPVSDSQNNGMVGSTTSSGGGAV
PRMSGPPCMPGQVTIQVRVPYRVVGLVVGPKGATIKHIQQETQTYIVTPS
REKEPIFEVTGLPDNVDTARKQIEAHIALRTGSGSGSGDAITMQSSDSVD
TKEYASLPSLTQILNDDLNSEILSSIYKNSVPSTQEYANNSMKTVVNVSN
SVKLVQGHHTGNCFQKSEFAEMEMTANITAADILDKRLPGNEVSVPLAKA
NVANIVFRTTSSKTLSFCPPTSTSASFHSNCNANILTRSCSSASSTTSTK
STNNSANTPPEILNIWKSISDSIDVDEGIGDSPSIWNQPANIIPTAHCSP
TISISPTDSLLGMGEHSANQQNLNHAKEPIMPNLPQKIKGIQVQSNADNF
LTHRECFVCNENTVTTALVPCGHNMFCMECANHICLSMDAVCPVCNSIVY
HAMRILG*

IP11918.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20555-PA 320 GF20555-PA 1..301 30..331 1110 72.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:27:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16398-PA 634 GG16398-PA 1..634 30..657 2873 90.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23938-PA 666 GH23938-PA 2..666 32..657 1525 52.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11360-PE 628 CG11360-PE 1..628 30..657 3251 100 Plus
CG11360-PD 628 CG11360-PD 1..628 30..657 3251 100 Plus
CG11360-PC 628 CG11360-PC 1..628 30..657 3251 100 Plus
CG11360-PA 628 CG11360-PA 1..628 30..657 3251 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14064-PA 138 GI14064-PA 4..138 47..175 307 53.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18139-PA 648 GL18139-PA 1..648 30..657 2008 66.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:27:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10947-PA 648 GA10947-PA 1..648 30..657 2008 66.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26809-PA 627 GM26809-PA 1..627 30..657 3092 95.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24410-PA 627 GD24410-PA 1..627 30..657 3102 95.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18673-PA 646 GJ18673-PA 1..646 59..657 1673 59 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13594-PA 685 GK13594-PA 9..685 52..657 1758 59 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14558-PA 607 GE14558-PA 1..607 59..657 2735 89.6 Plus